RNA–Protein interactions for RNA: ENST00000590873.5

FAM20A-204, Transcript of FAM20A, golgi associated secretory pathway pseudokinase, human

TSL 3

Gene FAM20A, Length 804 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM20A-204	ENST00000590873	RGL3	Q3MIN7	710 aa		13.68	□□□□□ -0.22
FAM20A-204	ENST00000590873	ESCO1	Q5FWF5	840 aa		13.68	□□□□□ -0.22
FAM20A-204	ENST00000590873	STK26	Q9P289	416 aa		13.67	□□□□□ -0.22
FAM20A-204	ENST00000590873	USP21	Q9UK80	565 aa		13.66	□□□□□ -0.22
FAM20A-204	ENST00000590873	NPHP3	Q7Z494	1330 aa		13.65	□□□□□ -0.22
FAM20A-204	ENST00000590873	SOS2	Q07890	1332 aa	Predicted RBP	13.64	□□□□□ -0.23
FAM20A-204	ENST00000590873	NUTM2F	A1L443	756 aa		13.64	□□□□□ -0.23
FAM20A-204	ENST00000590873	RGS12	O14924	1447 aa		13.64	□□□□□ -0.23
FAM20A-204	ENST00000590873	LRPPRC	P42704	1394 aa	Known RBP	13.63	□□□□□ -0.23
FAM20A-204	ENST00000590873	TRPC5	Q9UL62	973 aa	Predicted RBP	13.63	□□□□□ -0.23
FAM20A-204	ENST00000590873	ADGRF5	Q8IZF2	1346 aa		13.63	□□□□□ -0.23
FAM20A-204	ENST00000590873	ANKRD30B	Q9BXX2	1392 aa		13.62	□□□□□ -0.23
FAM20A-204	ENST00000590873	LAMC1	P11047	1609 aa		13.62	□□□□□ -0.23
FAM20A-204	ENST00000590873	FOXO3	O43524	673 aa		13.62	□□□□□ -0.23
FAM20A-204	ENST00000590873	XPC	Q01831	940 aa	Predicted RBP	13.62	□□□□□ -0.23
FAM20A-204	ENST00000590873	MPHOSPH9	Q99550	1183 aa		13.62	□□□□□ -0.23
FAM20A-204	ENST00000590873	PRAG1	Q86YV5	1406 aa		13.62	□□□□□ -0.23
FAM20A-204	ENST00000590873	CDC42BPG	Q6DT37	1551 aa		13.62	□□□□□ -0.23
FAM20A-204	ENST00000590873	WAPL	Q7Z5K2	1190 aa		13.61	□□□□□ -0.23
FAM20A-204	ENST00000590873	ATAD2	Q6PL18	1390 aa		13.6	□□□□□ -0.23
FAM20A-204	ENST00000590873	HAP1	P54257	671 aa	Predicted RBP	13.6	□□□□□ -0.23
FAM20A-204	ENST00000590873	TMEM132E	Q6IEE7	984 aa		13.6	□□□□□ -0.23
FAM20A-204	ENST00000590873	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.58	□□□□□ -0.24
FAM20A-204	ENST00000590873	ACIN1	Q9UKV3	1341 aa	Known RBP	13.58	□□□□□ -0.24
FAM20A-204	ENST00000590873	IFT172	Q9UG01	1749 aa		13.57	□□□□□ -0.24
FAM20A-204	ENST00000590873	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.57	□□□□□ -0.24
FAM20A-204	ENST00000590873	ABCC11	Q96J66	1382 aa		13.56	□□□□□ -0.24
FAM20A-204	ENST00000590873	KNDC1	Q76NI1	1749 aa		13.56	□□□□□ -0.24
FAM20A-204	ENST00000590873	TECPR2	O15040	1411 aa		13.56	□□□□□ -0.24
FAM20A-204	ENST00000590873	SPATA31E1	Q6ZUB1	1445 aa		13.56	□□□□□ -0.24
FAM20A-204	ENST00000590873	PXDN	Q92626	1479 aa		13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	PLEKHG5	O94827	1062 aa		13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	MARF1	Q9Y4F3	1742 aa	Known RBP	13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	DHX57	Q6P158	1386 aa	Known RBP	13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	PLEKHH1	Q9ULM0	1364 aa		13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	PIK3C2G	O75747	1445 aa		13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	ATRN	O75882	1429 aa		13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	MYOM2	P54296	1465 aa		13.55	□□□□□ -0.24
FAM20A-204	ENST00000590873	KIF1A	Q12756	1690 aa		13.54	□□□□□ -0.24
FAM20A-204	ENST00000590873	PSME1	Q06323	249 aa		13.54	□□□□□ -0.24
FAM20A-204	ENST00000590873	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
FAM20A-204	ENST00000590873	LMOD2	Q6P5Q4	547 aa		13.54	□□□□□ -0.24
FAM20A-204	ENST00000590873	KRT28	Q7Z3Y7	464 aa		13.53	□□□□□ -0.24
FAM20A-204	ENST00000590873	POGK	Q9P215	609 aa		13.53	□□□□□ -0.24
FAM20A-204	ENST00000590873	FMN2	Q9NZ56	1722 aa		13.53	□□□□□ -0.24
FAM20A-204	ENST00000590873	GJD4	Q96KN9	370 aa	Predicted RBP	13.52	□□□□□ -0.25
FAM20A-204	ENST00000590873	SPATA31A3	Q5VYP0	1347 aa		13.51	□□□□□ -0.25
FAM20A-204	ENST00000590873	CFAP70	Q5T0N1	1121 aa		13.51	□□□□□ -0.25
FAM20A-204	ENST00000590873	C14orf93	Q9H972	538 aa	Known RBP	13.51	□□□□□ -0.25
FAM20A-204	ENST00000590873	PHF8	Q9UPP1	1060 aa		13.51	□□□□□ -0.25
FAM20A-204	ENST00000590873	CCDC9	Q9Y3X0	531 aa	Known RBP	13.51	□□□□□ -0.25
FAM20A-204	ENST00000590873	BCL9L	Q86UU0	1499 aa		13.5	□□□□□ -0.25
FAM20A-204	ENST00000590873	UNC5CL	Q8IV45	518 aa		13.5	□□□□□ -0.25
FAM20A-204	ENST00000590873	SIRT1	Q96EB6	747 aa		13.5	□□□□□ -0.25
FAM20A-204	ENST00000590873	PRAM1	Q96QH2	718 aa		13.5	□□□□□ -0.25
FAM20A-204	ENST00000590873	ZRANB1	Q9UGI0	708 aa		13.5	□□□□□ -0.25
FAM20A-204	ENST00000590873	CCDC125	Q86Z20	511 aa		13.49	□□□□□ -0.25
FAM20A-204	ENST00000590873	SF3B2	Q13435	895 aa	Known RBP	13.48	□□□□□ -0.25
FAM20A-204	ENST00000590873	RGPD8	O14715	1765 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM20A-204	ENST00000590873	TNS3	Q68CZ2	1445 aa		13.47	□□□□□ -0.25
FAM20A-204	ENST00000590873	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.47	□□□□□ -0.25
FAM20A-204	ENST00000590873	USP32	Q8NFA0	1604 aa		13.47	□□□□□ -0.25
FAM20A-204	ENST00000590873		A0A0G2JS52	829 aa		13.47	□□□□□ -0.25
FAM20A-204	ENST00000590873	MYT1	Q01538	1121 aa		13.47	□□□□□ -0.25
FAM20A-204	ENST00000590873	PMFBP1	Q8TBY8	1022 aa		13.47	□□□□□ -0.25
FAM20A-204	ENST00000590873	CABLES1	Q8TDN4	633 aa		13.46	□□□□□ -0.25
FAM20A-204	ENST00000590873	KDM2A	Q9Y2K7	1162 aa		13.46	□□□□□ -0.25
FAM20A-204	ENST00000590873	ARHGEF10	O15013	1369 aa		13.45	□□□□□ -0.26
FAM20A-204	ENST00000590873	RALGAPB	Q86X10	1494 aa		13.45	□□□□□ -0.26
FAM20A-204	ENST00000590873	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.45	□□□□□ -0.26
FAM20A-204	ENST00000590873	TRAK1	Q9UPV9	953 aa		13.45	□□□□□ -0.26
FAM20A-204	ENST00000590873	RAB3GAP2	Q9H2M9	1393 aa		13.45	□□□□□ -0.26
FAM20A-204	ENST00000590873	SLIT2	O94813	1529 aa		13.44	□□□□□ -0.26
FAM20A-204	ENST00000590873	NRXN1	Q9ULB1	1477 aa		13.44	□□□□□ -0.26
FAM20A-204	ENST00000590873	SBNO1	A3KN83	1393 aa		13.44	□□□□□ -0.26
FAM20A-204	ENST00000590873	GPRASP1	Q5JY77	1395 aa		13.44	□□□□□ -0.26
FAM20A-204	ENST00000590873	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.43	□□□□□ -0.26
FAM20A-204	ENST00000590873	NPM3	O75607	178 aa	Known RBP	13.43	□□□□□ -0.26
FAM20A-204	ENST00000590873	SEPT12	Q8IYM1	358 aa		13.43	□□□□□ -0.26
FAM20A-204	ENST00000590873	DCAF11	Q8TEB1	546 aa		13.43	□□□□□ -0.26
FAM20A-204	ENST00000590873	EIF3A	Q14152	1382 aa	Known RBP	13.43	□□□□□ -0.26
FAM20A-204	ENST00000590873	GLI3	P10071	1580 aa		13.42	□□□□□ -0.26
FAM20A-204	ENST00000590873	ANKAR	Q7Z5J8	1434 aa		13.42	□□□□□ -0.26
FAM20A-204	ENST00000590873	VPS72	Q15906	364 aa		13.42	□□□□□ -0.26
FAM20A-204	ENST00000590873	PLCH1	Q4KWH8	1693 aa		13.42	□□□□□ -0.26
FAM20A-204	ENST00000590873	DLC1	Q96QB1	1528 aa		13.42	□□□□□ -0.26
FAM20A-204	ENST00000590873	PAK3	O75914	559 aa	Predicted RBP	13.41	□□□□□ -0.26
FAM20A-204	ENST00000590873	NGDN	Q8NEJ9	315 aa	Known RBP	13.41	□□□□□ -0.26
FAM20A-204	ENST00000590873	BLM	P54132	1417 aa	Predicted RBP	13.4	□□□□□ -0.26
FAM20A-204	ENST00000590873	NWD2	Q9ULI1	1742 aa		13.4	□□□□□ -0.26
FAM20A-204	ENST00000590873	KRT27	Q7Z3Y8	459 aa		13.39	□□□□□ -0.27
FAM20A-204	ENST00000590873	ADGRB2	O60241	1585 aa		13.39	□□□□□ -0.27
FAM20A-204	ENST00000590873	BRWD3	Q6RI45	1802 aa		13.39	□□□□□ -0.27
FAM20A-204	ENST00000590873	ABCA3	Q99758	1704 aa		13.39	□□□□□ -0.27
FAM20A-204	ENST00000590873	FAM83G	A6ND36	823 aa		13.38	□□□□□ -0.27
FAM20A-204	ENST00000590873	BTG4	Q9NY30	223 aa		13.38	□□□□□ -0.27
FAM20A-204	ENST00000590873	WASL	O00401	505 aa	Predicted RBP	13.37	□□□□□ -0.27
FAM20A-204	ENST00000590873	DEFB132	Q7Z7B7	95 aa		13.37	□□□□□ -0.27
FAM20A-204	ENST00000590873	STAC3	Q96MF2	364 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms