RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 LRP6O75581 1613 aa11.17□□□□□ -0.62
NPC1-208ENST00000590301 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
NPC1-208ENST00000590301 STK26Q9P289 416 aa11.17□□□□□ -0.62
NPC1-208ENST00000590301 PPLO60437 1756 aa11.17□□□□□ -0.62
NPC1-208ENST00000590301 SETD1AO15047 1707 aaKnown RBP11.17□□□□□ -0.62
NPC1-208ENST00000590301 NRXN1Q9ULB1 1477 aa11.17□□□□□ -0.62
NPC1-208ENST00000590301 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
NPC1-208ENST00000590301 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
NPC1-208ENST00000590301 CDC42BPGQ6DT37 1551 aa11.16□□□□□ -0.62
NPC1-208ENST00000590301 NPHP3Q7Z494 1330 aa11.16□□□□□ -0.62
NPC1-208ENST00000590301 ORAI2Q96SN7 254 aa11.16□□□□□ -0.62
NPC1-208ENST00000590301 SHPRHQ149N8 1683 aa11.16□□□□□ -0.62
NPC1-208ENST00000590301 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
NPC1-208ENST00000590301 NALCNQ8IZF0 1738 aa11.15□□□□□ -0.62
NPC1-208ENST00000590301 TMEM132EQ6IEE7 984 aa11.15□□□□□ -0.62
NPC1-208ENST00000590301 NHSL1Q5SYE7 1610 aa11.14□□□□□ -0.63
NPC1-208ENST00000590301 NUTM2BA6NNL0 878 aaPredicted RBP11.14□□□□□ -0.63
NPC1-208ENST00000590301 NUTM2EB1AL46 878 aaPredicted RBP11.14□□□□□ -0.63
NPC1-208ENST00000590301 WAPLQ7Z5K2 1190 aa11.14□□□□□ -0.63
NPC1-208ENST00000590301 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
NPC1-208ENST00000590301 DDX17Q92841 729 aaKnown RBP11.14□□□□□ -0.63
NPC1-208ENST00000590301 LAMC1P11047 1609 aa11.13□□□□□ -0.63
NPC1-208ENST00000590301 ESCO1Q5FWF5 840 aa11.13□□□□□ -0.63
NPC1-208ENST00000590301 CFAP70Q5T0N1 1121 aa11.13□□□□□ -0.63
NPC1-208ENST00000590301 AFF2P51816 1311 aa11.11□□□□□ -0.63
NPC1-208ENST00000590301 RXRBP28702 533 aa11.11□□□□□ -0.63
NPC1-208ENST00000590301 PLEKHH1Q9ULM0 1364 aa11.11□□□□□ -0.63
NPC1-208ENST00000590301 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
NPC1-208ENST00000590301 IFT172Q9UG01 1749 aa11.1□□□□□ -0.63
NPC1-208ENST00000590301 C8orf37Q96NL8 207 aa11.1□□□□□ -0.63
NPC1-208ENST00000590301 DLC1Q96QB1 1528 aa11.09□□□□□ -0.63
NPC1-208ENST00000590301 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
NPC1-208ENST00000590301 FOXO3O43524 673 aa11.09□□□□□ -0.63
NPC1-208ENST00000590301 DCAF11Q8TEB1 546 aa11.09□□□□□ -0.63
NPC1-208ENST00000590301 NGLY1Q96IV0 654 aa11.09□□□□□ -0.63
NPC1-208ENST00000590301 PRAM1Q96QH2 718 aa11.09□□□□□ -0.63
NPC1-208ENST00000590301 POGKQ9P215 609 aa11.09□□□□□ -0.63
NPC1-208ENST00000590301 KNDC1Q76NI1 1749 aa11.09□□□□□ -0.63
NPC1-208ENST00000590301 PXDNQ92626 1479 aa11.08□□□□□ -0.64
NPC1-208ENST00000590301 EIF3AQ14152 1382 aaKnown RBP11.08□□□□□ -0.64
NPC1-208ENST00000590301 ANKARQ7Z5J8 1434 aa11.08□□□□□ -0.64
NPC1-208ENST00000590301 ADAMTS2O95450 1211 aa11.07□□□□□ -0.64
NPC1-208ENST00000590301 RBM6P78332 1123 aaKnown RBP11.07□□□□□ -0.64
NPC1-208ENST00000590301 PSME1Q06323 249 aa11.07□□□□□ -0.64
NPC1-208ENST00000590301 FNBP4Q8N3X1 1017 aaPredicted RBP11.07□□□□□ -0.64
NPC1-208ENST00000590301 QTRT2Q9H974 415 aaKnown RBP11.07□□□□□ -0.64
NPC1-208ENST00000590301 ADGRB1O14514 1584 aa11.07□□□□□ -0.64
NPC1-208ENST00000590301 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
NPC1-208ENST00000590301 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
NPC1-208ENST00000590301 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
NPC1-208ENST00000590301 SPATA31A3Q5VYP0 1347 aa11.06□□□□□ -0.64
NPC1-208ENST00000590301 KRT28Q7Z3Y7 464 aa11.05□□□□□ -0.64
NPC1-208ENST00000590301 USP21Q9UK80 565 aa11.05□□□□□ -0.64
NPC1-208ENST00000590301 TRPC5Q9UL62 973 aaPredicted RBP11.05□□□□□ -0.64
NPC1-208ENST00000590301 SBNO1A3KN83 1393 aa11.04□□□□□ -0.64
NPC1-208ENST00000590301 XPCQ01831 940 aaPredicted RBP11.04□□□□□ -0.64
NPC1-208ENST00000590301 SAFB2Q14151 953 aaKnown RBP eCLIP11.04□□□□□ -0.64
NPC1-208ENST00000590301 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
NPC1-208ENST00000590301 CNKSR2Q8WXI2 1034 aa11.04□□□□□ -0.64
NPC1-208ENST00000590301 TRAK1Q9UPV9 953 aa11.04□□□□□ -0.64
NPC1-208ENST00000590301 COL22A1Q8NFW1 1626 aaPredicted RBP11.04□□□□□ -0.64
NPC1-208ENST00000590301 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
NPC1-208ENST00000590301 KIF1AQ12756 1690 aa11.03□□□□□ -0.64
NPC1-208ENST00000590301 ADGRB2O60241 1585 aa11.03□□□□□ -0.64
NPC1-208ENST00000590301 TNS3Q68CZ2 1445 aa11.02□□□□□ -0.64
NPC1-208ENST00000590301 FMN2Q9NZ56 1722 aa11.02□□□□□ -0.65
NPC1-208ENST00000590301 WASLO00401 505 aaPredicted RBP11.02□□□□□ -0.65
NPC1-208ENST00000590301 NPM3O75607 178 aaKnown RBP11.02□□□□□ -0.65
NPC1-208ENST00000590301 UPF1Q92900 1129 aaKnown RBP eCLIP11.01□□□□□ -0.65
NPC1-208ENST00000590301 GPRASP1Q5JY77 1395 aa11.01□□□□□ -0.65
NPC1-208ENST00000590301 RGS12O14924 1447 aa11.01□□□□□ -0.65
NPC1-208ENST00000590301 ATRNO75882 1429 aa11.01□□□□□ -0.65
NPC1-208ENST00000590301 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
NPC1-208ENST00000590301 TULP4Q9NRJ4 1543 aa10.99□□□□□ -0.65
NPC1-208ENST00000590301 HAP1P54257 671 aaPredicted RBP10.99□□□□□ -0.65
NPC1-208ENST00000590301 HIRIP3Q9BW71 556 aaPredicted RBP10.99□□□□□ -0.65
NPC1-208ENST00000590301 BCL9LQ86UU0 1499 aa10.99□□□□□ -0.65
NPC1-208ENST00000590301 UNC5CLQ8IV45 518 aa10.98□□□□□ -0.65
NPC1-208ENST00000590301 PMFBP1Q8TBY8 1022 aa10.98□□□□□ -0.65
NPC1-208ENST00000590301 ATAD2Q6PL18 1390 aa10.98□□□□□ -0.65
NPC1-208ENST00000590301 GJD4Q96KN9 370 aaPredicted RBP10.97□□□□□ -0.65
NPC1-208ENST00000590301 PRR36Q9H6K5 1346 aa10.97□□□□□ -0.65
NPC1-208ENST00000590301 SLIT2O94813 1529 aa10.97□□□□□ -0.65
NPC1-208ENST00000590301 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.65
NPC1-208ENST00000590301 NGDNQ8NEJ9 315 aaKnown RBP10.96□□□□□ -0.65
NPC1-208ENST00000590301 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
NPC1-208ENST00000590301 VPS72Q15906 364 aa10.94□□□□□ -0.66
NPC1-208ENST00000590301 CDK19Q9BWU1 502 aa10.94□□□□□ -0.66
NPC1-208ENST00000590301 CCDC61Q9Y6R9 512 aa10.94□□□□□ -0.66
NPC1-208ENST00000590301 ATP7BP35670 1465 aa10.93□□□□□ -0.66
NPC1-208ENST00000590301 CENPJQ9HC77 1338 aaPredicted RBP10.93□□□□□ -0.66
NPC1-208ENST00000590301 HOXD11P31277 338 aaPredicted RBP10.93□□□□□ -0.66
NPC1-208ENST00000590301 NBPF1Q3BBV0 1214 aa10.93□□□□□ -0.66
NPC1-208ENST00000590301 CCDC125Q86Z20 511 aa10.93□□□□□ -0.66
NPC1-208ENST00000590301 CABLES1Q8TDN4 633 aa10.93□□□□□ -0.66
NPC1-208ENST00000590301 L3MBTL2Q969R5 705 aa10.93□□□□□ -0.66
NPC1-208ENST00000590301 USP32Q8NFA0 1604 aa10.93□□□□□ -0.66
NPC1-208ENST00000590301 POLR3AO14802 1390 aaPredicted RBP10.92□□□□□ -0.66
NPC1-208ENST00000590301 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
NPC1-208ENST00000590301 RTN4Q9NQC3 1192 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms