RNA–Protein interactions for RNA: ENST00000590249.5

GHDC-210, Transcript of GH3 domain containing, humanhuman

TSL 4

Gene GHDC, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-210ENST00000590249 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
GHDC-210ENST00000590249 HRCP23327 699 aa23.11■■□□□ 1.29
GHDC-210ENST00000590249 ORAI2Q96SN7 254 aa23.11■■□□□ 1.29
GHDC-210ENST00000590249 C14orf93Q9H972 538 aaKnown RBP23.1■■□□□ 1.29
GHDC-210ENST00000590249 FMN2Q9NZ56 1722 aa23.09■■□□□ 1.29
GHDC-210ENST00000590249 CFAP70Q5T0N1 1121 aa23.09■■□□□ 1.29
GHDC-210ENST00000590249 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.29
GHDC-210ENST00000590249 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
GHDC-210ENST00000590249 MEX3CQ5U5Q3 659 aaKnown RBP23.05■■□□□ 1.28
GHDC-210ENST00000590249 NUTM2BA6NNL0 878 aaPredicted RBP23.04■■□□□ 1.28
GHDC-210ENST00000590249 NUTM2EB1AL46 878 aaPredicted RBP23.04■■□□□ 1.28
GHDC-210ENST00000590249 NUTM2AQ8IVF1 878 aaPredicted RBP23.04■■□□□ 1.28
GHDC-210ENST00000590249 LRRC59Q96AG4 307 aaKnown RBP23.04■■□□□ 1.28
GHDC-210ENST00000590249 SOS2Q07890 1332 aaPredicted RBP23.03■■□□□ 1.28
GHDC-210ENST00000590249 DHX57Q6P158 1386 aaKnown RBP23.02■■□□□ 1.28
GHDC-210ENST00000590249 DLC1Q96QB1 1528 aa23.02■■□□□ 1.28
GHDC-210ENST00000590249 PXDNQ92626 1479 aa23.01■■□□□ 1.27
GHDC-210ENST00000590249 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
GHDC-210ENST00000590249 RGPD8O14715 1765 aaPredicted RBP23.01■■□□□ 1.27
GHDC-210ENST00000590249 ESCO1Q5FWF5 840 aa23■■□□□ 1.27
GHDC-210ENST00000590249 DCAF11Q8TEB1 546 aa22.99■■□□□ 1.27
GHDC-210ENST00000590249 KDM2AQ9Y2K7 1162 aa22.99■■□□□ 1.27
GHDC-210ENST00000590249 COL22A1Q8NFW1 1626 aaPredicted RBP22.99■■□□□ 1.27
GHDC-210ENST00000590249 KIF1AQ12756 1690 aa22.98■■□□□ 1.27
GHDC-210ENST00000590249 SIRT1Q96EB6 747 aa22.98■■□□□ 1.27
GHDC-210ENST00000590249 ADGRB2O60241 1585 aa22.97■■□□□ 1.27
GHDC-210ENST00000590249 SAFB2Q14151 953 aaKnown RBP eCLIP22.96■■□□□ 1.27
GHDC-210ENST00000590249 PRAM1Q96QH2 718 aa22.96■■□□□ 1.27
GHDC-210ENST00000590249 NPHP3Q7Z494 1330 aa22.95■■□□□ 1.26
GHDC-210ENST00000590249 USP32Q8NFA0 1604 aa22.94■■□□□ 1.26
GHDC-210ENST00000590249 XPCQ01831 940 aaPredicted RBP22.94■■□□□ 1.26
GHDC-210ENST00000590249 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
GHDC-210ENST00000590249 AFF2P51816 1311 aa22.93■■□□□ 1.26
GHDC-210ENST00000590249 FOXO3O43524 673 aa22.93■■□□□ 1.26
GHDC-210ENST00000590249 ZNF772Q68DY9 489 aaPredicted RBP22.93■■□□□ 1.26
GHDC-210ENST00000590249 C8orf37Q96NL8 207 aa22.9■■□□□ 1.26
GHDC-210ENST00000590249 TRAK1Q9UPV9 953 aa22.9■■□□□ 1.26
GHDC-210ENST00000590249 ADAMTS2O95450 1211 aa22.89■■□□□ 1.25
GHDC-210ENST00000590249 POGKQ9P215 609 aa22.89■■□□□ 1.25
GHDC-210ENST00000590249 MARF1Q9Y4F3 1742 aaKnown RBP22.88■■□□□ 1.25
GHDC-210ENST00000590249 STAC3Q96MF2 364 aa22.88■■□□□ 1.25
GHDC-210ENST00000590249 KIAA1210Q9ULL0 1709 aa22.88■■□□□ 1.25
GHDC-210ENST00000590249 ANKARQ7Z5J8 1434 aa22.85■■□□□ 1.25
GHDC-210ENST00000590249 MINK1Q8N4C8 1332 aaPredicted RBP22.84■■□□□ 1.25
GHDC-210ENST00000590249 HIRIP3Q9BW71 556 aaPredicted RBP22.84■■□□□ 1.25
GHDC-210ENST00000590249 TULP4Q9NRJ4 1543 aa22.83■■□□□ 1.25
GHDC-210ENST00000590249 PHF8Q9UPP1 1060 aa22.83■■□□□ 1.25
GHDC-210ENST00000590249 CDK12Q9NYV4 1490 aaPredicted RBP22.82■■□□□ 1.24
GHDC-210ENST00000590249 SPATA31A3Q5VYP0 1347 aa22.82■■□□□ 1.24
GHDC-210ENST00000590249 RXRBP28702 533 aa22.81■■□□□ 1.24
GHDC-210ENST00000590249 NGLY1Q96IV0 654 aa22.81■■□□□ 1.24
GHDC-210ENST00000590249 ABCA3Q99758 1704 aa22.81■■□□□ 1.24
GHDC-210ENST00000590249 TNS3Q68CZ2 1445 aa22.81■■□□□ 1.24
GHDC-210ENST00000590249 PRR36Q9H6K5 1346 aa22.81■■□□□ 1.24
GHDC-210ENST00000590249 KRT28Q7Z3Y7 464 aa22.8■■□□□ 1.24
GHDC-210ENST00000590249 TRPM3Q9HCF6 1732 aaPredicted RBP22.79■■□□□ 1.24
GHDC-210ENST00000590249 RGS12O14924 1447 aa22.79■■□□□ 1.24
GHDC-210ENST00000590249 PMFBP1Q8TBY8 1022 aa22.77■■□□□ 1.24
GHDC-210ENST00000590249 QTRT2Q9H974 415 aaKnown RBP22.76■■□□□ 1.23
GHDC-210ENST00000590249 ATP7BP35670 1465 aa22.76■■□□□ 1.23
GHDC-210ENST00000590249 ITSN1Q15811 1721 aa22.76■■□□□ 1.23
GHDC-210ENST00000590249 EIF3AQ14152 1382 aaKnown RBP22.76■■□□□ 1.23
GHDC-210ENST00000590249 WASLO00401 505 aaPredicted RBP22.75■■□□□ 1.23
GHDC-210ENST00000590249 FNBP4Q8N3X1 1017 aaPredicted RBP22.75■■□□□ 1.23
GHDC-210ENST00000590249 SBNO1A3KN83 1393 aa22.75■■□□□ 1.23
GHDC-210ENST00000590249 NBPF1Q3BBV0 1214 aa22.74■■□□□ 1.23
GHDC-210ENST00000590249 USP21Q9UK80 565 aa22.74■■□□□ 1.23
GHDC-210ENST00000590249 ALS2Q96Q42 1657 aa22.74■■□□□ 1.23
GHDC-210ENST00000590249 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.74■■□□□ 1.23
GHDC-210ENST00000590249 ATRNO75882 1429 aa22.74■■□□□ 1.23
GHDC-210ENST00000590249 RBM6P78332 1123 aaKnown RBP22.73■■□□□ 1.23
GHDC-210ENST00000590249 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
GHDC-210ENST00000590249 TOPAZ1Q8N9V7 1692 aa22.73■■□□□ 1.23
GHDC-210ENST00000590249 BCL9LQ86UU0 1499 aa22.73■■□□□ 1.23
GHDC-210ENST00000590249 PSME1Q06323 249 aa22.71■■□□□ 1.23
GHDC-210ENST00000590249 L3MBTL2Q969R5 705 aa22.71■■□□□ 1.23
GHDC-210ENST00000590249 TRPM1Q7Z4N2 1603 aa22.71■■□□□ 1.23
GHDC-210ENST00000590249 PLCH1Q4KWH8 1693 aa22.7■■□□□ 1.22
GHDC-210ENST00000590249 QRICH2Q9H0J4 1663 aa22.69■■□□□ 1.22
GHDC-210ENST00000590249 ARHGEF10O15013 1369 aa22.69■■□□□ 1.22
GHDC-210ENST00000590249 PLEKHG5O94827 1062 aa22.69■■□□□ 1.22
GHDC-210ENST00000590249 CABLES1Q8TDN4 633 aa22.69■■□□□ 1.22
GHDC-210ENST00000590249 CRYBG1Q9Y4K1 1723 aa22.68■■□□□ 1.22
GHDC-210ENST00000590249 SLIT2O94813 1529 aa22.68■■□□□ 1.22
GHDC-210ENST00000590249 TRPC5Q9UL62 973 aaPredicted RBP22.68■■□□□ 1.22
GHDC-210ENST00000590249 LMOD2Q6P5Q4 547 aa22.67■■□□□ 1.22
GHDC-210ENST00000590249 UPF1Q92900 1129 aaKnown RBP eCLIP22.66■■□□□ 1.22
GHDC-210ENST00000590249 GPRASP1Q5JY77 1395 aa22.65■■□□□ 1.22
GHDC-210ENST00000590249 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
GHDC-210ENST00000590249 NUDT16Q96DE0 195 aaKnown RBP22.64■■□□□ 1.21
GHDC-210ENST00000590249 CDK19Q9BWU1 502 aa22.64■■□□□ 1.21
GHDC-210ENST00000590249 NWD2Q9ULI1 1742 aa22.64■■□□□ 1.21
GHDC-210ENST00000590249 GLI3P10071 1580 aa22.63■■□□□ 1.21
GHDC-210ENST00000590249 HAP1P54257 671 aaPredicted RBP22.63■■□□□ 1.21
GHDC-210ENST00000590249 NGDNQ8NEJ9 315 aaKnown RBP22.62■■□□□ 1.21
GHDC-210ENST00000590249 CENPJQ9HC77 1338 aaPredicted RBP22.6■■□□□ 1.21
GHDC-210ENST00000590249 NRAPQ86VF7 1730 aa22.6■■□□□ 1.21
GHDC-210ENST00000590249 RALGAPBQ86X10 1494 aa22.6■■□□□ 1.21
GHDC-210ENST00000590249 UNC5CLQ8IV45 518 aa22.59■■□□□ 1.21
GHDC-210ENST00000590249 PHRF1Q9P1Y6 1649 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms