RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 TMEM132EQ6IEE7 984 aa28.35■■■□□ 2.13
PDCD5-207ENST00000590247 PNPLA6Q8IY17 1366 aa28.35■■■□□ 2.13
PDCD5-207ENST00000590247 NUTM2BA6NNL0 878 aaPredicted RBP28.34■■■□□ 2.13
PDCD5-207ENST00000590247 NUTM2EB1AL46 878 aaPredicted RBP28.34■■■□□ 2.13
PDCD5-207ENST00000590247 NUTM2AQ8IVF1 878 aaPredicted RBP28.34■■■□□ 2.13
PDCD5-207ENST00000590247 STK26Q9P289 416 aa28.34■■■□□ 2.13
PDCD5-207ENST00000590247 ZNF772Q68DY9 489 aaPredicted RBP28.32■■■□□ 2.12
PDCD5-207ENST00000590247 WAPLQ7Z5K2 1190 aa28.32■■■□□ 2.12
PDCD5-207ENST00000590247 SOS2Q07890 1332 aaPredicted RBP28.32■■■□□ 2.12
PDCD5-207ENST00000590247 YTHDC2Q9H6S0 1430 aaKnown RBP28.31■■■□□ 2.12
PDCD5-207ENST00000590247 PLEKHH1Q9ULM0 1364 aa28.3■■■□□ 2.12
PDCD5-207ENST00000590247 C14orf93Q9H972 538 aaKnown RBP28.3■■■□□ 2.12
PDCD5-207ENST00000590247 CFAP70Q5T0N1 1121 aa28.25■■■□□ 2.11
PDCD5-207ENST00000590247 FMN2Q9NZ56 1722 aa28.24■■■□□ 2.11
PDCD5-207ENST00000590247 ESCO1Q5FWF5 840 aa28.24■■■□□ 2.11
PDCD5-207ENST00000590247 SIRT1Q96EB6 747 aa28.24■■■□□ 2.11
PDCD5-207ENST00000590247 AFF2P51816 1311 aa28.23■■■□□ 2.11
PDCD5-207ENST00000590247 STAC3Q96MF2 364 aa28.21■■■□□ 2.11
PDCD5-207ENST00000590247 COL22A1Q8NFW1 1626 aaPredicted RBP28.21■■■□□ 2.11
PDCD5-207ENST00000590247 PXDNQ92626 1479 aa28.21■■■□□ 2.11
PDCD5-207ENST00000590247 DHX57Q6P158 1386 aaKnown RBP28.2■■■□□ 2.1
PDCD5-207ENST00000590247 NPHP3Q7Z494 1330 aa28.19■■■□□ 2.1
PDCD5-207ENST00000590247 NUTM2FA1L443 756 aa28.18■■■□□ 2.1
PDCD5-207ENST00000590247 C8orf37Q96NL8 207 aa28.18■■■□□ 2.1
PDCD5-207ENST00000590247 RXRBP28702 533 aa28.17■■■□□ 2.1
PDCD5-207ENST00000590247 RGPD8O14715 1765 aaPredicted RBP28.16■■■□□ 2.1
PDCD5-207ENST00000590247 FOXO3O43524 673 aa28.15■■■□□ 2.1
PDCD5-207ENST00000590247 ADGRB1O14514 1584 aa28.15■■■□□ 2.1
PDCD5-207ENST00000590247 DLC1Q96QB1 1528 aa28.14■■■□□ 2.1
PDCD5-207ENST00000590247 CDK12Q9NYV4 1490 aaPredicted RBP28.14■■■□□ 2.09
PDCD5-207ENST00000590247 KIF1AQ12756 1690 aa28.13■■■□□ 2.09
PDCD5-207ENST00000590247 ADAMTS2O95450 1211 aa28.13■■■□□ 2.09
PDCD5-207ENST00000590247 XPCQ01831 940 aaPredicted RBP28.11■■■□□ 2.09
PDCD5-207ENST00000590247 NGLY1Q96IV0 654 aa28.1■■■□□ 2.09
PDCD5-207ENST00000590247 PRAM1Q96QH2 718 aa28.1■■■□□ 2.09
PDCD5-207ENST00000590247 DCAF11Q8TEB1 546 aa28.09■■■□□ 2.09
PDCD5-207ENST00000590247 QTRT2Q9H974 415 aaKnown RBP28.09■■■□□ 2.09
PDCD5-207ENST00000590247 MARF1Q9Y4F3 1742 aaKnown RBP28.09■■■□□ 2.09
PDCD5-207ENST00000590247 KDM2AQ9Y2K7 1162 aa28.08■■■□□ 2.09
PDCD5-207ENST00000590247 SAFB2Q14151 953 aaKnown RBP eCLIP28.06■■■□□ 2.08
PDCD5-207ENST00000590247 ADGRB2O60241 1585 aa28.05■■■□□ 2.08
PDCD5-207ENST00000590247 RBM6P78332 1123 aaKnown RBP28.05■■■□□ 2.08
PDCD5-207ENST00000590247 FNBP4Q8N3X1 1017 aaPredicted RBP28.04■■■□□ 2.08
PDCD5-207ENST00000590247 USP32Q8NFA0 1604 aa28.03■■■□□ 2.08
PDCD5-207ENST00000590247 RGS12O14924 1447 aa28.03■■■□□ 2.08
PDCD5-207ENST00000590247 KIAA1210Q9ULL0 1709 aa28.03■■■□□ 2.08
PDCD5-207ENST00000590247 SPATA31A3Q5VYP0 1347 aa28.02■■■□□ 2.08
PDCD5-207ENST00000590247 UPF1Q92900 1129 aaKnown RBP eCLIP28.02■■■□□ 2.08
PDCD5-207ENST00000590247 POGKQ9P215 609 aa28.02■■■□□ 2.08
PDCD5-207ENST00000590247 TRAK1Q9UPV9 953 aa28.02■■■□□ 2.08
PDCD5-207ENST00000590247 USP21Q9UK80 565 aa28.01■■■□□ 2.07
PDCD5-207ENST00000590247 PHF8Q9UPP1 1060 aa28.01■■■□□ 2.07
PDCD5-207ENST00000590247 KRT28Q7Z3Y7 464 aa28■■■□□ 2.07
PDCD5-207ENST00000590247 ANKARQ7Z5J8 1434 aa27.99■■■□□ 2.07
PDCD5-207ENST00000590247 ATRNO75882 1429 aa27.97■■■□□ 2.07
PDCD5-207ENST00000590247 ARHGEF28Q8N1W1 1705 aaKnown RBP27.96■■■□□ 2.07
PDCD5-207ENST00000590247 TRPC5Q9UL62 973 aaPredicted RBP27.96■■■□□ 2.07
PDCD5-207ENST00000590247 BCL9LQ86UU0 1499 aa27.95■■■□□ 2.07
PDCD5-207ENST00000590247 TNS3Q68CZ2 1445 aa27.94■■■□□ 2.06
PDCD5-207ENST00000590247 HIRIP3Q9BW71 556 aaPredicted RBP27.93■■■□□ 2.06
PDCD5-207ENST00000590247 MINK1Q8N4C8 1332 aaPredicted RBP27.92■■■□□ 2.06
PDCD5-207ENST00000590247 SBNO1A3KN83 1393 aa27.92■■■□□ 2.06
PDCD5-207ENST00000590247 PSME1Q06323 249 aa27.92■■■□□ 2.06
PDCD5-207ENST00000590247 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.92■■■□□ 2.06
PDCD5-207ENST00000590247 PMFBP1Q8TBY8 1022 aa27.9■■■□□ 2.06
PDCD5-207ENST00000590247 TULP4Q9NRJ4 1543 aa27.9■■■□□ 2.06
PDCD5-207ENST00000590247 PRR36Q9H6K5 1346 aa27.9■■■□□ 2.06
PDCD5-207ENST00000590247 ABCA3Q99758 1704 aa27.89■■■□□ 2.06
PDCD5-207ENST00000590247 TRPM3Q9HCF6 1732 aaPredicted RBP27.89■■■□□ 2.05
PDCD5-207ENST00000590247 EIF3AQ14152 1382 aaKnown RBP27.88■■■□□ 2.05
PDCD5-207ENST00000590247 SLIT2O94813 1529 aa27.88■■■□□ 2.05
PDCD5-207ENST00000590247 WASLO00401 505 aaPredicted RBP27.88■■■□□ 2.05
PDCD5-207ENST00000590247 CABLES1Q8TDN4 633 aa27.84■■■□□ 2.05
PDCD5-207ENST00000590247 ARHGEF10O15013 1369 aa27.84■■■□□ 2.05
PDCD5-207ENST00000590247 ALS2Q96Q42 1657 aa27.83■■■□□ 2.05
PDCD5-207ENST00000590247 ITSN1Q15811 1721 aa27.83■■■□□ 2.05
PDCD5-207ENST00000590247 UNC5CLQ8IV45 518 aa27.82■■■□□ 2.04
PDCD5-207ENST00000590247 GJD4Q96KN9 370 aaPredicted RBP27.82■■■□□ 2.04
PDCD5-207ENST00000590247 LMOD2Q6P5Q4 547 aa27.8■■■□□ 2.04
PDCD5-207ENST00000590247 PLCH1Q4KWH8 1693 aa27.8■■■□□ 2.04
PDCD5-207ENST00000590247 NWD2Q9ULI1 1742 aa27.79■■■□□ 2.04
PDCD5-207ENST00000590247 GLI3P10071 1580 aa27.79■■■□□ 2.04
PDCD5-207ENST00000590247 ATP7BP35670 1465 aa27.79■■■□□ 2.04
PDCD5-207ENST00000590247 GPRASP1Q5JY77 1395 aa27.78■■■□□ 2.04
PDCD5-207ENST00000590247 ATAD2Q6PL18 1390 aa27.77■■■□□ 2.04
PDCD5-207ENST00000590247 HAP1P54257 671 aaPredicted RBP27.77■■■□□ 2.04
PDCD5-207ENST00000590247 NBPF1Q3BBV0 1214 aa27.77■■■□□ 2.04
PDCD5-207ENST00000590247 RALGAPBQ86X10 1494 aa27.76■■■□□ 2.04
PDCD5-207ENST00000590247 PLEKHG5O94827 1062 aa27.75■■■□□ 2.03
PDCD5-207ENST00000590247 NUDT16Q96DE0 195 aaKnown RBP27.75■■■□□ 2.03
PDCD5-207ENST00000590247 CRYBG1Q9Y4K1 1723 aa27.75■■■□□ 2.03
PDCD5-207ENST00000590247 L3MBTL2Q969R5 705 aa27.74■■■□□ 2.03
PDCD5-207ENST00000590247 TOPAZ1Q8N9V7 1692 aa27.74■■■□□ 2.03
PDCD5-207ENST00000590247 TRPM1Q7Z4N2 1603 aa27.74■■■□□ 2.03
PDCD5-207ENST00000590247 NGDNQ8NEJ9 315 aaKnown RBP27.73■■■□□ 2.03
PDCD5-207ENST00000590247 CDK19Q9BWU1 502 aa27.72■■■□□ 2.03
PDCD5-207ENST00000590247 FAM83GA6ND36 823 aa27.71■■■□□ 2.03
PDCD5-207ENST00000590247 BRWD3Q6RI45 1802 aa27.7■■■□□ 2.02
PDCD5-207ENST00000590247 VPS72Q15906 364 aa27.7■■■□□ 2.02
PDCD5-207ENST00000590247 SIN3AQ96ST3 1273 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms