RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 MADDQ8WXG6 1647 aa19.95■□□□□ 0.78
MBD1-222ENST00000590208 ATP10AO60312 1499 aa19.94■□□□□ 0.78
MBD1-222ENST00000590208 GAS2L3Q86XJ1 694 aa19.94■□□□□ 0.78
MBD1-222ENST00000590208 ZMYM3Q14202 1370 aa19.92■□□□□ 0.78
MBD1-222ENST00000590208 HSCBQ8IWL3 235 aa19.92■□□□□ 0.78
MBD1-222ENST00000590208 DDX11L8A8MPP1 907 aa19.9■□□□□ 0.78
MBD1-222ENST00000590208 AAMPQ13685 434 aa19.9■□□□□ 0.78
MBD1-222ENST00000590208 MVPQ14764 893 aaKnown RBP19.9■□□□□ 0.78
MBD1-222ENST00000590208 PREX2Q70Z35 1606 aa19.89■□□□□ 0.78
MBD1-222ENST00000590208 RUNDC1Q96C34 613 aa19.89■□□□□ 0.78
MBD1-222ENST00000590208 TRIM44Q96DX7 344 aaPredicted RBP19.89■□□□□ 0.77
MBD1-222ENST00000590208 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
MBD1-222ENST00000590208 TNPO1Q92973 898 aaKnown RBP19.88■□□□□ 0.77
MBD1-222ENST00000590208 ARHGAP5Q13017 1502 aa19.88■□□□□ 0.77
MBD1-222ENST00000590208 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
MBD1-222ENST00000590208 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
MBD1-222ENST00000590208 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
MBD1-222ENST00000590208 CFAP70Q5T0N1 1121 aa19.88■□□□□ 0.77
MBD1-222ENST00000590208 FTSJ3Q8IY81 847 aaKnown RBP19.87■□□□□ 0.77
MBD1-222ENST00000590208 SCAPERQ9BY12 1400 aa19.87■□□□□ 0.77
MBD1-222ENST00000590208 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
MBD1-222ENST00000590208 DDIT3P35638 169 aa19.86■□□□□ 0.77
MBD1-222ENST00000590208 KDM5AP29375 1690 aaKnown RBP19.86■□□□□ 0.77
MBD1-222ENST00000590208 MAST1Q9Y2H9 1570 aa19.85■□□□□ 0.77
MBD1-222ENST00000590208 MORC1Q86VD1 984 aa19.85■□□□□ 0.77
MBD1-222ENST00000590208 DZIP1LQ8IYY4 767 aaKnown RBP19.85■□□□□ 0.77
MBD1-222ENST00000590208 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
MBD1-222ENST00000590208 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
MBD1-222ENST00000590208 WDR63Q8IWG1 891 aa19.84■□□□□ 0.77
MBD1-222ENST00000590208 CEP152O94986 1710 aa19.84■□□□□ 0.77
MBD1-222ENST00000590208 ZKSCAN2Q63HK3 967 aa19.84■□□□□ 0.77
MBD1-222ENST00000590208 TSR2Q969E8 191 aaKnown RBP19.83■□□□□ 0.76
MBD1-222ENST00000590208 DUOX2Q9NRD8 1548 aa19.81■□□□□ 0.76
MBD1-222ENST00000590208 NCOA3Q9Y6Q9 1424 aa19.81■□□□□ 0.76
MBD1-222ENST00000590208 ITPRIPQ8IWB1 547 aa19.81■□□□□ 0.76
MBD1-222ENST00000590208 ISY1Q9ULR0 285 aaKnown RBP19.81■□□□□ 0.76
MBD1-222ENST00000590208 TTC37Q6PGP7 1564 aa19.81■□□□□ 0.76
MBD1-222ENST00000590208 TRIM27P14373 513 aa19.8■□□□□ 0.76
MBD1-222ENST00000590208 MTHFSP49914 203 aa19.8■□□□□ 0.76
MBD1-222ENST00000590208 IQSEC2Q5JU85 1478 aa19.8■□□□□ 0.76
MBD1-222ENST00000590208 SHPRHQ149N8 1683 aa19.8■□□□□ 0.76
MBD1-222ENST00000590208 SPHKAPQ2M3C7 1700 aa19.8■□□□□ 0.76
MBD1-222ENST00000590208 HSP90AB1P08238 724 aaKnown RBP19.79■□□□□ 0.76
MBD1-222ENST00000590208 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
MBD1-222ENST00000590208 SMC4Q9NTJ3 1288 aa19.79■□□□□ 0.76
MBD1-222ENST00000590208 CD2BP2O95400 341 aaKnown RBP19.79■□□□□ 0.76
MBD1-222ENST00000590208 NSD3Q9BZ95 1437 aa19.78■□□□□ 0.76
MBD1-222ENST00000590208 KIAA1211Q6ZU35 1233 aa19.78■□□□□ 0.76
MBD1-222ENST00000590208 SMC5Q8IY18 1101 aa19.78■□□□□ 0.76
MBD1-222ENST00000590208 HDAC1Q13547 482 aaPredicted RBP19.78■□□□□ 0.76
MBD1-222ENST00000590208 ADGRF5Q8IZF2 1346 aa19.77■□□□□ 0.76
MBD1-222ENST00000590208 RBM25P49756 843 aaKnown RBP19.77■□□□□ 0.76
MBD1-222ENST00000590208 RAB3GAP1Q15042 981 aa19.77■□□□□ 0.76
MBD1-222ENST00000590208 GBP4Q96PP9 640 aa19.77■□□□□ 0.76
MBD1-222ENST00000590208 LNPKQ9C0E8 428 aa19.77■□□□□ 0.76
MBD1-222ENST00000590208 SNX21Q969T3 373 aa19.76■□□□□ 0.75
MBD1-222ENST00000590208 EXOSC9Q06265 439 aaKnown RBP19.76■□□□□ 0.75
MBD1-222ENST00000590208 SSH1Q8WYL5 1049 aa19.75■□□□□ 0.75
MBD1-222ENST00000590208 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.75■□□□□ 0.75
MBD1-222ENST00000590208 CLTCL1P53675 1640 aa19.75■□□□□ 0.75
MBD1-222ENST00000590208 TPM2P07951 284 aa19.75■□□□□ 0.75
MBD1-222ENST00000590208 U2AF1L5P0DN76 240 aaPredicted RBP19.75■□□□□ 0.75
MBD1-222ENST00000590208 U2AF1Q01081 240 aaKnown RBP eCLIP19.75■□□□□ 0.75
MBD1-222ENST00000590208 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
MBD1-222ENST00000590208 NPM1P06748 294 aaKnown RBP eCLIP19.74■□□□□ 0.75
MBD1-222ENST00000590208 KIF2CQ99661 725 aa19.74■□□□□ 0.75
MBD1-222ENST00000590208 RBM42Q9BTD8 480 aaKnown RBP19.74■□□□□ 0.75
MBD1-222ENST00000590208 TRPM2O94759 1503 aa19.73■□□□□ 0.75
MBD1-222ENST00000590208 TMEM57Q8N5G2 664 aa19.73■□□□□ 0.75
MBD1-222ENST00000590208 STAC3Q96MF2 364 aa19.73■□□□□ 0.75
MBD1-222ENST00000590208 DDX19BQ9UMR2 479 aa19.73■□□□□ 0.75
MBD1-222ENST00000590208 SSFA2P28290 1259 aa19.72■□□□□ 0.75
MBD1-222ENST00000590208 NOB1Q9ULX3 412 aaKnown RBP19.72■□□□□ 0.75
MBD1-222ENST00000590208 NASPP49321 788 aaPredicted RBP19.72■□□□□ 0.75
MBD1-222ENST00000590208 SKOR2Q2VWA4 1001 aaPredicted RBP19.72■□□□□ 0.75
MBD1-222ENST00000590208 CIZ1Q9ULV3 898 aaPredicted RBP19.72■□□□□ 0.75
MBD1-222ENST00000590208 KANK1Q14678 1352 aa19.72■□□□□ 0.75
MBD1-222ENST00000590208 ATF7IPQ6VMQ6 1270 aa19.72■□□□□ 0.75
MBD1-222ENST00000590208 DNAJC5Q9H3Z4 198 aa19.72■□□□□ 0.75
MBD1-222ENST00000590208 PDCL3Q9H2J4 239 aa19.71■□□□□ 0.75
MBD1-222ENST00000590208 RBM10P98175 930 aaKnown RBP19.7■□□□□ 0.74
MBD1-222ENST00000590208 CCDC173Q0VFZ6 552 aa19.7■□□□□ 0.74
MBD1-222ENST00000590208 ZBTB40Q9NUA8 1239 aa19.69■□□□□ 0.74
MBD1-222ENST00000590208 PTPRTO14522 1441 aa19.69■□□□□ 0.74
MBD1-222ENST00000590208 NUCB1Q02818 461 aa19.69■□□□□ 0.74
MBD1-222ENST00000590208 ZSCAN30Q86W11 494 aa19.69■□□□□ 0.74
MBD1-222ENST00000590208 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
MBD1-222ENST00000590208 CFAP53Q96M91 514 aa19.69■□□□□ 0.74
MBD1-222ENST00000590208 PPP1R9BQ96SB3 815 aa19.69■□□□□ 0.74
MBD1-222ENST00000590208 TRAPPC8Q9Y2L5 1435 aa19.68■□□□□ 0.74
MBD1-222ENST00000590208 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
MBD1-222ENST00000590208 GAS2L2Q8NHY3 880 aa19.68■□□□□ 0.74
MBD1-222ENST00000590208 ZNF518AQ6AHZ1 1483 aa19.68■□□□□ 0.74
MBD1-222ENST00000590208 ZCCHC11Q5TAX3 1644 aaKnown RBP19.68■□□□□ 0.74
MBD1-222ENST00000590208 AFAP1Q8N556 730 aa19.67■□□□□ 0.74
MBD1-222ENST00000590208 DDX49Q9Y6V7 483 aaKnown RBP19.67■□□□□ 0.74
MBD1-222ENST00000590208 CHD1LQ86WJ1 897 aa19.66■□□□□ 0.74
MBD1-222ENST00000590208 K7ELQ4 463 aaPredicted RBP19.66■□□□□ 0.74
MBD1-222ENST00000590208 OFD1O75665 1012 aa19.66■□□□□ 0.74
MBD1-222ENST00000590208 RIPK4P57078 832 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms