RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 ATF3P18847 181 aa9□□□□□ -0.97
LDLRAD4-213ENST00000590115 NGLY1Q96IV0 654 aa9□□□□□ -0.97
LDLRAD4-213ENST00000590115 TBX22Q9Y458 520 aa9□□□□□ -0.97
LDLRAD4-213ENST00000590115 BLMP54132 1417 aaPredicted RBP8.99□□□□□ -0.97
LDLRAD4-213ENST00000590115 PTCH1Q13635 1447 aa8.99□□□□□ -0.97
LDLRAD4-213ENST00000590115 C14orf37Q86TY3 774 aa8.99□□□□□ -0.97
LDLRAD4-213ENST00000590115 MYOM2P54296 1465 aa8.99□□□□□ -0.97
LDLRAD4-213ENST00000590115 TNS1Q9HBL0 1735 aaKnown RBP8.98□□□□□ -0.97
LDLRAD4-213ENST00000590115 ADAMTS2O95450 1211 aa8.98□□□□□ -0.97
LDLRAD4-213ENST00000590115 CCDC125Q86Z20 511 aa8.98□□□□□ -0.97
LDLRAD4-213ENST00000590115 FNBP4Q8N3X1 1017 aaPredicted RBP8.98□□□□□ -0.97
LDLRAD4-213ENST00000590115 LRRC59Q96AG4 307 aaKnown RBP8.98□□□□□ -0.97
LDLRAD4-213ENST00000590115 USP21Q9UK80 565 aa8.98□□□□□ -0.97
LDLRAD4-213ENST00000590115 TRPC5Q9UL62 973 aaPredicted RBP8.98□□□□□ -0.97
LDLRAD4-213ENST00000590115 PIK3C2GO75747 1445 aa8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 NBPF8Q3BBV2 869 aa8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 DEFB132Q7Z7B7 95 aa8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 BCANQ96GW7 911 aa8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 ADGRB1O14514 1584 aa8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 ACIN1Q9UKV3 1341 aaKnown RBP8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 PLCH1Q4KWH8 1693 aa8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 RGPD1P0DJD0 1748 aa8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 ADGRL3Q9HAR2 1447 aa8.97□□□□□ -0.97
LDLRAD4-213ENST00000590115 L3MBTL2Q969R5 705 aa8.96□□□□□ -0.98
LDLRAD4-213ENST00000590115 ABCA3Q99758 1704 aa8.96□□□□□ -0.98
LDLRAD4-213ENST00000590115 METP08581 1390 aa8.96□□□□□ -0.98
LDLRAD4-213ENST00000590115 RGL3Q3MIN7 710 aa8.95□□□□□ -0.98
LDLRAD4-213ENST00000590115 PRAG1Q86YV5 1406 aa8.95□□□□□ -0.98
LDLRAD4-213ENST00000590115 C1orf167Q5SNV9 1468 aa8.95□□□□□ -0.98
LDLRAD4-213ENST00000590115 RALGAPBQ86X10 1494 aa8.95□□□□□ -0.98
LDLRAD4-213ENST00000590115 NWD2Q9ULI1 1742 aa8.94□□□□□ -0.98
LDLRAD4-213ENST00000590115 AMOTL2Q9Y2J4 779 aa8.94□□□□□ -0.98
LDLRAD4-213ENST00000590115 SOS2Q07890 1332 aaPredicted RBP8.94□□□□□ -0.98
LDLRAD4-213ENST00000590115 UTRNP46939 3433 aa8.94□□□□□ -0.98
LDLRAD4-213ENST00000590115 PPP1R15AO75807 674 aaPredicted RBP8.93□□□□□ -0.98
LDLRAD4-213ENST00000590115 CHGAP10645 457 aaKnown RBP8.93□□□□□ -0.98
LDLRAD4-213ENST00000590115 USP32Q8NFA0 1604 aa8.93□□□□□ -0.98
LDLRAD4-213ENST00000590115 CAMTA1Q9Y6Y1 1673 aa8.93□□□□□ -0.98
LDLRAD4-213ENST00000590115 SLIT2O94813 1529 aa8.92□□□□□ -0.98
LDLRAD4-213ENST00000590115 PXDNQ92626 1479 aa8.92□□□□□ -0.98
LDLRAD4-213ENST00000590115 RPGRIP1LQ68CZ1 1315 aa8.92□□□□□ -0.98
LDLRAD4-213ENST00000590115 PSDA5PKW4 1024 aaPredicted RBP8.92□□□□□ -0.98
LDLRAD4-213ENST00000590115 NEUROD1Q13562 356 aa8.92□□□□□ -0.98
LDLRAD4-213ENST00000590115 CHD4Q14839 1912 aa8.92□□□□□ -0.98
LDLRAD4-213ENST00000590115 NRAPQ86VF7 1730 aa8.91□□□□□ -0.98
LDLRAD4-213ENST00000590115 RREB1Q92766 1687 aa8.91□□□□□ -0.98
LDLRAD4-213ENST00000590115 TRPM1Q7Z4N2 1603 aa8.91□□□□□ -0.98
LDLRAD4-213ENST00000590115 NBPF1Q3BBV0 1214 aa8.91□□□□□ -0.98
LDLRAD4-213ENST00000590115 CFAP70Q5T0N1 1121 aa8.91□□□□□ -0.98
LDLRAD4-213ENST00000590115 GJD4Q96KN9 370 aaPredicted RBP8.91□□□□□ -0.98
LDLRAD4-213ENST00000590115 NUP188Q5SRE5 1749 aa8.91□□□□□ -0.98
LDLRAD4-213ENST00000590115 CLSPNQ9HAW4 1339 aa8.9□□□□□ -0.98
LDLRAD4-213ENST00000590115 C14orf93Q9H972 538 aaKnown RBP8.9□□□□□ -0.98
LDLRAD4-213ENST00000590115 DCAF11Q8TEB1 546 aa8.89□□□□□ -0.99
LDLRAD4-213ENST00000590115 RGPD8O14715 1765 aaPredicted RBP8.89□□□□□ -0.99
LDLRAD4-213ENST00000590115 KIAA1210Q9ULL0 1709 aa8.88□□□□□ -0.99
LDLRAD4-213ENST00000590115 GPRASP1Q5JY77 1395 aa8.88□□□□□ -0.99
LDLRAD4-213ENST00000590115 ROBO2Q9HCK4 1378 aa8.88□□□□□ -0.99
LDLRAD4-213ENST00000590115 PLEKHH1Q9ULM0 1364 aa8.88□□□□□ -0.99
LDLRAD4-213ENST00000590115 ZNF326Q5BKZ1 582 aaKnown RBP8.88□□□□□ -0.99
LDLRAD4-213ENST00000590115 TMEM132EQ6IEE7 984 aa8.88□□□□□ -0.99
LDLRAD4-213ENST00000590115 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.88□□□□□ -0.99
LDLRAD4-213ENST00000590115 TECPR2O15040 1411 aa8.88□□□□□ -0.99
LDLRAD4-213ENST00000590115 CDC42BPGQ6DT37 1551 aa8.87□□□□□ -0.99
LDLRAD4-213ENST00000590115 YY1P25490 414 aa8.87□□□□□ -0.99
LDLRAD4-213ENST00000590115 ORAI2Q96SN7 254 aa8.87□□□□□ -0.99
LDLRAD4-213ENST00000590115 KDM2AQ9Y2K7 1162 aa8.87□□□□□ -0.99
LDLRAD4-213ENST00000590115 KNDC1Q76NI1 1749 aa8.87□□□□□ -0.99
LDLRAD4-213ENST00000590115 HDGFP51858 240 aaKnown RBP8.86□□□□□ -0.99
LDLRAD4-213ENST00000590115 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
LDLRAD4-213ENST00000590115 ARHGEF28Q8N1W1 1705 aaKnown RBP8.85□□□□□ -0.99
LDLRAD4-213ENST00000590115 THSD7AQ9UPZ6 1657 aa8.85□□□□□ -0.99
LDLRAD4-213ENST00000590115 VGFO15240 615 aaPredicted RBP8.85□□□□□ -0.99
LDLRAD4-213ENST00000590115 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
LDLRAD4-213ENST00000590115 DISP2A7MBM2 1401 aa8.85□□□□□ -0.99
LDLRAD4-213ENST00000590115 YTHDC2Q9H6S0 1430 aaKnown RBP8.85□□□□□ -0.99
LDLRAD4-213ENST00000590115 LRPPRCP42704 1394 aaKnown RBP8.85□□□□□ -0.99
LDLRAD4-213ENST00000590115 DLC1Q96QB1 1528 aa8.84□□□□□ -0.99
LDLRAD4-213ENST00000590115 ABCC11Q96J66 1382 aa8.84□□□□□ -0.99
LDLRAD4-213ENST00000590115 FMN2Q9NZ56 1722 aa8.83□□□□□ -1
LDLRAD4-213ENST00000590115 UNC5CLQ8IV45 518 aa8.83□□□□□ -1
LDLRAD4-213ENST00000590115 SEPT12Q8IYM1 358 aa8.83□□□□□ -1
LDLRAD4-213ENST00000590115 KIF1AQ12756 1690 aa8.83□□□□□ -1
LDLRAD4-213ENST00000590115 CEP350Q5VT06 3117 aa8.83□□□□□ -1
LDLRAD4-213ENST00000590115 CRYBG1Q9Y4K1 1723 aa8.83□□□□□ -1
LDLRAD4-213ENST00000590115 SF3B2Q13435 895 aaKnown RBP8.82□□□□□ -1
LDLRAD4-213ENST00000590115 R3HDM1Q15032 1099 aaKnown RBP8.82□□□□□ -1
LDLRAD4-213ENST00000590115 ADGRB2O60241 1585 aa8.82□□□□□ -1
LDLRAD4-213ENST00000590115 CASZ1Q86V15 1759 aa8.81□□□□□ -1
LDLRAD4-213ENST00000590115 ONECUT3O60422 494 aaPredicted RBP8.81□□□□□ -1
LDLRAD4-213ENST00000590115 WAPLQ7Z5K2 1190 aa8.81□□□□□ -1
LDLRAD4-213ENST00000590115 TONSLQ96HA7 1378 aa8.81□□□□□ -1
LDLRAD4-213ENST00000590115 BAG6P46379 1132 aa8.8□□□□□ -1
LDLRAD4-213ENST00000590115 EN1Q05925 392 aaPredicted RBP8.8□□□□□ -1
LDLRAD4-213ENST00000590115 KRT27Q7Z3Y8 459 aa8.8□□□□□ -1
LDLRAD4-213ENST00000590115 STAC3Q96MF2 364 aa8.8□□□□□ -1
LDLRAD4-213ENST00000590115 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
LDLRAD4-213ENST00000590115 TULP4Q9NRJ4 1543 aa8.8□□□□□ -1
LDLRAD4-213ENST00000590115 MYOM1P52179 1685 aa8.79□□□□□ -1
LDLRAD4-213ENST00000590115 XPCQ01831 940 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms