RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 CPLX2Q6PUV4 134 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-214ENST00000589677 RDXP35241 583 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-214ENST00000589677 MLECQ14165 292 aa17.62■□□□□ 0.41
SMARCA4-214ENST00000589677 RIPK4P57078 832 aa17.61■□□□□ 0.41
SMARCA4-214ENST00000589677 H0YHG0 523 aa17.61■□□□□ 0.41
SMARCA4-214ENST00000589677 CLSTN1O94985 981 aa17.6■□□□□ 0.41
SMARCA4-214ENST00000589677 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
SMARCA4-214ENST00000589677 TSPYL1Q9H0U9 437 aa17.6■□□□□ 0.41
SMARCA4-214ENST00000589677 CEP89Q96ST8 783 aa17.6■□□□□ 0.41
SMARCA4-214ENST00000589677 KIF3BO15066 747 aa17.6■□□□□ 0.41
SMARCA4-214ENST00000589677 CUX1P39880 1505 aa17.6■□□□□ 0.41
SMARCA4-214ENST00000589677 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
SMARCA4-214ENST00000589677 LRRC9Q6ZRR7 1453 aa17.59■□□□□ 0.41
SMARCA4-214ENST00000589677 CCDC192P0DO97 292 aa17.58■□□□□ 0.41
SMARCA4-214ENST00000589677 EVC2Q86UK5 1308 aa17.58■□□□□ 0.4
SMARCA4-214ENST00000589677 DIAPH1O60610 1272 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-214ENST00000589677 MYOM3Q5VTT5 1437 aa17.58■□□□□ 0.4
SMARCA4-214ENST00000589677 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.4
SMARCA4-214ENST00000589677 GNAI1P63096 354 aa17.58■□□□□ 0.4
SMARCA4-214ENST00000589677 TRIM29Q14134 588 aa17.58■□□□□ 0.4
SMARCA4-214ENST00000589677 LRRFIP1Q32MZ4 808 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-214ENST00000589677 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
SMARCA4-214ENST00000589677 NEK4P51957 841 aa17.57■□□□□ 0.4
SMARCA4-214ENST00000589677 STAC3Q96MF2 364 aa17.57■□□□□ 0.4
SMARCA4-214ENST00000589677 PDCP20941 246 aa17.56■□□□□ 0.4
SMARCA4-214ENST00000589677 HSP90AB4PQ58FF6 505 aa17.56■□□□□ 0.4
SMARCA4-214ENST00000589677 CYB5RLQ6IPT4 315 aa17.55■□□□□ 0.4
SMARCA4-214ENST00000589677 IFIT2P09913 472 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-214ENST00000589677 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
SMARCA4-214ENST00000589677 SPC24Q8NBT2 197 aa17.55■□□□□ 0.4
SMARCA4-214ENST00000589677 WDR33Q9C0J8 1336 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-214ENST00000589677 PATL2C9JE40 543 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-214ENST00000589677 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
SMARCA4-214ENST00000589677 CPLX1O14810 134 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 ERC2O15083 957 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 NPHP1O15259 732 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 CLCN1P35523 988 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 MCM5P33992 734 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 SYNE3Q6ZMZ3 975 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 C11orf95C9JLR9 678 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 PSMA5P28066 241 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 AKAP17AQ02040 695 aaKnown RBP17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 SDF4Q9BRK5 362 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
SMARCA4-214ENST00000589677 PPP2R1AP30153 589 aa17.53■□□□□ 0.4
SMARCA4-214ENST00000589677 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
SMARCA4-214ENST00000589677 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
SMARCA4-214ENST00000589677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.53■□□□□ 0.43e-7■■■■□ 26.2
SMARCA4-214ENST00000589677 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-214ENST00000589677 USP8P40818 1118 aa17.52■□□□□ 0.4
SMARCA4-214ENST00000589677 CCDC184Q52MB2 194 aa17.52■□□□□ 0.4
SMARCA4-214ENST00000589677 CCDC47Q96A33 483 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-214ENST00000589677 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
SMARCA4-214ENST00000589677 TOMM22Q9NS69 142 aa17.52■□□□□ 0.4
SMARCA4-214ENST00000589677 PCMTD1Q96MG8 357 aaPredicted RBP17.52■□□□□ 0.39
SMARCA4-214ENST00000589677 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
SMARCA4-214ENST00000589677 KINO60870 393 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-214ENST00000589677 BCAR3O75815 825 aa17.51■□□□□ 0.39
SMARCA4-214ENST00000589677 CCDC191Q8NCU4 936 aa17.51■□□□□ 0.39
SMARCA4-214ENST00000589677 DYNC1I1O14576 645 aa17.51■□□□□ 0.39
SMARCA4-214ENST00000589677 FBXW7Q969H0 707 aa17.51■□□□□ 0.39
SMARCA4-214ENST00000589677 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMARCA4-214ENST00000589677 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.392e-7■■■■□ 24.9
SMARCA4-214ENST00000589677 EIF3JO75822 258 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 CBX1P83916 185 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 CALCOCO1Q9P1Z2 691 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 FIBPO43427 364 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 SMC2O95347 1197 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 DEF6Q9H4E7 631 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 PDILTQ8N807 584 aa17.5■□□□□ 0.39
SMARCA4-214ENST00000589677 ERLIN1O75477 346 aa17.49■□□□□ 0.39
SMARCA4-214ENST00000589677 PRDM10Q9NQV6 1147 aa17.49■□□□□ 0.39
SMARCA4-214ENST00000589677 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
SMARCA4-214ENST00000589677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-214ENST00000589677 AMPHP49418 695 aa17.49■□□□□ 0.39
SMARCA4-214ENST00000589677 TOP2BQ02880 1626 aa17.48■□□□□ 0.39
SMARCA4-214ENST00000589677 RRP12Q5JTH9 1297 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-214ENST00000589677 COG3Q96JB2 828 aa17.48■□□□□ 0.39
SMARCA4-214ENST00000589677 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
SMARCA4-214ENST00000589677 KIF2AO00139 706 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-214ENST00000589677 CNTROBQ8N137 903 aa17.47■□□□□ 0.39
SMARCA4-214ENST00000589677 TNMDQ9H2S6 317 aa17.46■□□□□ 0.39
SMARCA4-214ENST00000589677 CAGE1Q8TC20 777 aa17.46■□□□□ 0.39
SMARCA4-214ENST00000589677 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-214ENST00000589677 CGNQ9P2M7 1197 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-214ENST00000589677 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
SMARCA4-214ENST00000589677 WDR63Q8IWG1 891 aa17.45■□□□□ 0.38
SMARCA4-214ENST00000589677 ERICH4A6NGS2 130 aa17.45■□□□□ 0.38
SMARCA4-214ENST00000589677 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
SMARCA4-214ENST00000589677 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
SMARCA4-214ENST00000589677 KIAA0754O94854 1291 aa17.44■□□□□ 0.38
SMARCA4-214ENST00000589677 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■□□□ 14.1
SMARCA4-214ENST00000589677 ZNF396Q96N95 335 aaPredicted RBP17.44■□□□□ 0.38
SMARCA4-214ENST00000589677 FKBP5Q13451 457 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms