RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 NHSL1Q5SYE7 1610 aa31.24■■■□□ 2.59
CIRBP-222ENST00000589235 DDX17Q92841 729 aaKnown RBP31.24■■■□□ 2.59
CIRBP-222ENST00000589235 WAPLQ7Z5K2 1190 aa31.23■■■□□ 2.59
CIRBP-222ENST00000589235 SIRT1Q96EB6 747 aa31.22■■■□□ 2.59
CIRBP-222ENST00000589235 DHX57Q6P158 1386 aaKnown RBP31.2■■■□□ 2.59
CIRBP-222ENST00000589235 ESCO1Q5FWF5 840 aa31.2■■■□□ 2.59
CIRBP-222ENST00000589235 YTHDC2Q9H6S0 1430 aaKnown RBP31.2■■■□□ 2.59
CIRBP-222ENST00000589235 MYOM2P54296 1465 aa31.2■■■□□ 2.58
CIRBP-222ENST00000589235 CFAP70Q5T0N1 1121 aa31.18■■■□□ 2.58
CIRBP-222ENST00000589235 SOS2Q07890 1332 aaPredicted RBP31.18■■■□□ 2.58
CIRBP-222ENST00000589235 CDC42BPGQ6DT37 1551 aa31.17■■■□□ 2.58
CIRBP-222ENST00000589235 PNPLA6Q8IY17 1366 aa31.17■■■□□ 2.58
CIRBP-222ENST00000589235 NRXN1Q9ULB1 1477 aa31.16■■■□□ 2.58
CIRBP-222ENST00000589235 STAC3Q96MF2 364 aa31.16■■■□□ 2.58
CIRBP-222ENST00000589235 NPHP3Q7Z494 1330 aa31.15■■■□□ 2.58
CIRBP-222ENST00000589235 KNDC1Q76NI1 1749 aa31.12■■■□□ 2.57
CIRBP-222ENST00000589235 LAMC1P11047 1609 aa31.11■■■□□ 2.57
CIRBP-222ENST00000589235 PLEKHH1Q9ULM0 1364 aa31.11■■■□□ 2.57
CIRBP-222ENST00000589235 NUTM2FA1L443 756 aa31.09■■■□□ 2.57
CIRBP-222ENST00000589235 DCAF11Q8TEB1 546 aa31.09■■■□□ 2.57
CIRBP-222ENST00000589235 AFF2P51816 1311 aa31.08■■■□□ 2.57
CIRBP-222ENST00000589235 RXRBP28702 533 aa31.08■■■□□ 2.57
CIRBP-222ENST00000589235 C8orf37Q96NL8 207 aa31.08■■■□□ 2.57
CIRBP-222ENST00000589235 KDM2AQ9Y2K7 1162 aa31.08■■■□□ 2.57
CIRBP-222ENST00000589235 POGKQ9P215 609 aa31.07■■■□□ 2.56
CIRBP-222ENST00000589235 FOXO3O43524 673 aa31.06■■■□□ 2.56
CIRBP-222ENST00000589235 NGLY1Q96IV0 654 aa31.04■■■□□ 2.56
CIRBP-222ENST00000589235 PRAM1Q96QH2 718 aa31.04■■■□□ 2.56
CIRBP-222ENST00000589235 ADAMTS2O95450 1211 aa31.03■■■□□ 2.56
CIRBP-222ENST00000589235 SAFB2Q14151 953 aaKnown RBP eCLIP30.99■■■□□ 2.55
CIRBP-222ENST00000589235 QTRT2Q9H974 415 aaKnown RBP30.98■■■□□ 2.55
CIRBP-222ENST00000589235 XPCQ01831 940 aaPredicted RBP30.97■■■□□ 2.55
CIRBP-222ENST00000589235 DLC1Q96QB1 1528 aa30.97■■■□□ 2.55
CIRBP-222ENST00000589235 TRAK1Q9UPV9 953 aa30.96■■■□□ 2.55
CIRBP-222ENST00000589235 PXDNQ92626 1479 aa30.95■■■□□ 2.55
CIRBP-222ENST00000589235 PSME1Q06323 249 aa30.95■■■□□ 2.55
CIRBP-222ENST00000589235 RBM6P78332 1123 aaKnown RBP30.94■■■□□ 2.54
CIRBP-222ENST00000589235 FMN2Q9NZ56 1722 aa30.94■■■□□ 2.54
CIRBP-222ENST00000589235 PHF8Q9UPP1 1060 aa30.94■■■□□ 2.54
CIRBP-222ENST00000589235 KRT28Q7Z3Y7 464 aa30.93■■■□□ 2.54
CIRBP-222ENST00000589235 CDK12Q9NYV4 1490 aaPredicted RBP30.92■■■□□ 2.54
CIRBP-222ENST00000589235 USP21Q9UK80 565 aa30.91■■■□□ 2.54
CIRBP-222ENST00000589235 ADGRB1O14514 1584 aa30.91■■■□□ 2.54
CIRBP-222ENST00000589235 KIF1AQ12756 1690 aa30.9■■■□□ 2.54
CIRBP-222ENST00000589235 COL22A1Q8NFW1 1626 aaPredicted RBP30.9■■■□□ 2.54
CIRBP-222ENST00000589235 FNBP4Q8N3X1 1017 aaPredicted RBP30.88■■■□□ 2.53
CIRBP-222ENST00000589235 SPATA31A3Q5VYP0 1347 aa30.88■■■□□ 2.53
CIRBP-222ENST00000589235 EIF3AQ14152 1382 aaKnown RBP30.88■■■□□ 2.53
CIRBP-222ENST00000589235 TRPC5Q9UL62 973 aaPredicted RBP30.87■■■□□ 2.53
CIRBP-222ENST00000589235 ANKARQ7Z5J8 1434 aa30.87■■■□□ 2.53
CIRBP-222ENST00000589235 MINK1Q8N4C8 1332 aaPredicted RBP30.84■■■□□ 2.53
CIRBP-222ENST00000589235 HIRIP3Q9BW71 556 aaPredicted RBP30.83■■■□□ 2.53
CIRBP-222ENST00000589235 HAP1P54257 671 aaPredicted RBP30.82■■■□□ 2.52
CIRBP-222ENST00000589235 ADGRB2O60241 1585 aa30.8■■■□□ 2.52
CIRBP-222ENST00000589235 WASLO00401 505 aaPredicted RBP30.8■■■□□ 2.52
CIRBP-222ENST00000589235 PMFBP1Q8TBY8 1022 aa30.8■■■□□ 2.52
CIRBP-222ENST00000589235 SBNO1A3KN83 1393 aa30.79■■■□□ 2.52
CIRBP-222ENST00000589235 LMOD2Q6P5Q4 547 aa30.78■■■□□ 2.52
CIRBP-222ENST00000589235 UPF1Q92900 1129 aaKnown RBP eCLIP30.78■■■□□ 2.52
CIRBP-222ENST00000589235 TNS3Q68CZ2 1445 aa30.77■■■□□ 2.52
CIRBP-222ENST00000589235 ARHGEF10O15013 1369 aa30.76■■■□□ 2.51
CIRBP-222ENST00000589235 GPRASP1Q5JY77 1395 aa30.75■■■□□ 2.51
CIRBP-222ENST00000589235 RGS12O14924 1447 aa30.73■■■□□ 2.51
CIRBP-222ENST00000589235 ATRNO75882 1429 aa30.73■■■□□ 2.51
CIRBP-222ENST00000589235 RGPD8O14715 1765 aaPredicted RBP30.72■■■□□ 2.51
CIRBP-222ENST00000589235 TULP4Q9NRJ4 1543 aa30.72■■■□□ 2.51
CIRBP-222ENST00000589235 NGDNQ8NEJ9 315 aaKnown RBP30.71■■■□□ 2.51
CIRBP-222ENST00000589235 UNC5CLQ8IV45 518 aa30.69■■■□□ 2.5
CIRBP-222ENST00000589235 BCL9LQ86UU0 1499 aa30.69■■■□□ 2.5
CIRBP-222ENST00000589235 PRR36Q9H6K5 1346 aa30.68■■■□□ 2.5
CIRBP-222ENST00000589235 USP32Q8NFA0 1604 aa30.67■■■□□ 2.5
CIRBP-222ENST00000589235 PLEKHG5O94827 1062 aa30.66■■■□□ 2.5
CIRBP-222ENST00000589235 CABLES1Q8TDN4 633 aa30.66■■■□□ 2.5
CIRBP-222ENST00000589235 NUDT16Q96DE0 195 aaKnown RBP30.66■■■□□ 2.5
CIRBP-222ENST00000589235 GJD4Q96KN9 370 aaPredicted RBP30.66■■■□□ 2.5
CIRBP-222ENST00000589235 KIAA1210Q9ULL0 1709 aa30.65■■■□□ 2.5
CIRBP-222ENST00000589235 MARF1Q9Y4F3 1742 aaKnown RBP30.65■■■□□ 2.5
CIRBP-222ENST00000589235 CDK19Q9BWU1 502 aa30.64■■■□□ 2.5
CIRBP-222ENST00000589235 NBPF1Q3BBV0 1214 aa30.63■■■□□ 2.49
CIRBP-222ENST00000589235 ATAD2Q6PL18 1390 aa30.63■■■□□ 2.49
CIRBP-222ENST00000589235 ARHGEF28Q8N1W1 1705 aaKnown RBP30.62■■■□□ 2.49
CIRBP-222ENST00000589235 SLIT2O94813 1529 aa30.62■■■□□ 2.49
CIRBP-222ENST00000589235 PAK3O75914 559 aaPredicted RBP30.61■■■□□ 2.49
CIRBP-222ENST00000589235 L3MBTL2Q969R5 705 aa30.6■■■□□ 2.49
CIRBP-222ENST00000589235 CCDC61Q9Y6R9 512 aa30.58■■■□□ 2.49
CIRBP-222ENST00000589235 NEUROD1Q13562 356 aa30.57■■■□□ 2.48
CIRBP-222ENST00000589235 CENPJQ9HC77 1338 aaPredicted RBP30.56■■■□□ 2.48
CIRBP-222ENST00000589235 SIN3AQ96ST3 1273 aa30.56■■■□□ 2.48
CIRBP-222ENST00000589235 ATP7BP35670 1465 aa30.55■■■□□ 2.48
CIRBP-222ENST00000589235 VPS72Q15906 364 aa30.54■■■□□ 2.48
CIRBP-222ENST00000589235 CCDC9Q9Y3X0 531 aaKnown RBP30.54■■■□□ 2.48
CIRBP-222ENST00000589235 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.53■■■□□ 2.48
CIRBP-222ENST00000589235 FAM83GA6ND36 823 aa30.52■■■□□ 2.48
CIRBP-222ENST00000589235 SRPK2P78362 688 aaKnown RBP30.52■■■□□ 2.48
CIRBP-222ENST00000589235 ITSN1Q15811 1721 aa30.51■■■□□ 2.47
CIRBP-222ENST00000589235 RALGAPBQ86X10 1494 aa30.5■■■□□ 2.47
CIRBP-222ENST00000589235 TRPM3Q9HCF6 1732 aaPredicted RBP30.5■■■□□ 2.47
CIRBP-222ENST00000589235 PLEKHG3A1L390 1219 aa30.5■■■□□ 2.47
CIRBP-222ENST00000589235 ACEP12821 1306 aa30.48■■■□□ 2.47
CIRBP-222ENST00000589235 NBPF8Q3BBV2 869 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms