RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 HFM1A2PYH4 1435 aa25.2■■□□□ 1.63
SEC11C-205ENST00000588875 MYOM2P54296 1465 aa25.19■■□□□ 1.62
SEC11C-205ENST00000588875 NPHP3Q7Z494 1330 aa25.17■■□□□ 1.62
SEC11C-205ENST00000588875 BCL9LQ86UU0 1499 aa25.17■■□□□ 1.62
SEC11C-205ENST00000588875 COL22A1Q8NFW1 1626 aaPredicted RBP25.17■■□□□ 1.62
SEC11C-205ENST00000588875 XPCQ01831 940 aaPredicted RBP25.17■■□□□ 1.62
SEC11C-205ENST00000588875 FOXO3O43524 673 aa25.16■■□□□ 1.62
SEC11C-205ENST00000588875 PXDNQ92626 1479 aa25.15■■□□□ 1.62
SEC11C-205ENST00000588875 SLC4A1APQ9BWU0 796 aaKnown RBP25.14■■□□□ 1.62
SEC11C-205ENST00000588875 ZRANB1Q9UGI0 708 aa25.14■■□□□ 1.62
SEC11C-205ENST00000588875 RRBP1Q9P2E9 1410 aaKnown RBP25.13■■□□□ 1.61
SEC11C-205ENST00000588875 EP400Q96L91 3159 aa25.12■■□□□ 1.61
SEC11C-205ENST00000588875 WAPLQ7Z5K2 1190 aa25.12■■□□□ 1.61
SEC11C-205ENST00000588875 GJD4Q96KN9 370 aaPredicted RBP25.12■■□□□ 1.61
SEC11C-205ENST00000588875 NUTM2FA1L443 756 aa25.11■■□□□ 1.61
SEC11C-205ENST00000588875 ADGRF5Q8IZF2 1346 aa25.11■■□□□ 1.61
SEC11C-205ENST00000588875 CDC42BPGQ6DT37 1551 aa25.1■■□□□ 1.61
SEC11C-205ENST00000588875 CCDC125Q86Z20 511 aa25.1■■□□□ 1.61
SEC11C-205ENST00000588875 STK26Q9P289 416 aa25.1■■□□□ 1.61
SEC11C-205ENST00000588875 FOXD1Q16676 465 aa25.09■■□□□ 1.61
SEC11C-205ENST00000588875 PPLO60437 1756 aa25.08■■□□□ 1.6
SEC11C-205ENST00000588875 LRPPRCP42704 1394 aaKnown RBP25.05■■□□□ 1.6
SEC11C-205ENST00000588875 TMEM132EQ6IEE7 984 aa25.04■■□□□ 1.6
SEC11C-205ENST00000588875 UNC5CLQ8IV45 518 aa25.04■■□□□ 1.6
SEC11C-205ENST00000588875 PLEKHH1Q9ULM0 1364 aa25.04■■□□□ 1.6
SEC11C-205ENST00000588875 TECPR2O15040 1411 aa25.03■■□□□ 1.6
SEC11C-205ENST00000588875 RGL3Q3MIN7 710 aa25.03■■□□□ 1.6
SEC11C-205ENST00000588875 SPATA31A3Q5VYP0 1347 aa25.03■■□□□ 1.6
SEC11C-205ENST00000588875 ABCC11Q96J66 1382 aa25.02■■□□□ 1.6
SEC11C-205ENST00000588875 SLIT2O94813 1529 aa25.01■■□□□ 1.59
SEC11C-205ENST00000588875 RALGAPBQ86X10 1494 aa25■■□□□ 1.59
SEC11C-205ENST00000588875 MARF1Q9Y4F3 1742 aaKnown RBP25■■□□□ 1.59
SEC11C-205ENST00000588875 KRT28Q7Z3Y7 464 aa24.99■■□□□ 1.59
SEC11C-205ENST00000588875 GLI3P10071 1580 aa24.98■■□□□ 1.59
SEC11C-205ENST00000588875 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
SEC11C-205ENST00000588875 ANKRD30BQ9BXX2 1392 aa24.96■■□□□ 1.59
SEC11C-205ENST00000588875 CCDC144AA2RUR9 1427 aa24.95■■□□□ 1.59
SEC11C-205ENST00000588875 BLMP54132 1417 aaPredicted RBP24.95■■□□□ 1.59
SEC11C-205ENST00000588875 DEFB132Q7Z7B7 95 aa24.95■■□□□ 1.58
SEC11C-205ENST00000588875 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.94■■□□□ 1.58
SEC11C-205ENST00000588875 SEPT12Q8IYM1 358 aa24.93■■□□□ 1.58
SEC11C-205ENST00000588875 CABLES1Q8TDN4 633 aa24.93■■□□□ 1.58
SEC11C-205ENST00000588875 SIRT1Q96EB6 747 aa24.92■■□□□ 1.58
SEC11C-205ENST00000588875 YTHDC2Q9H6S0 1430 aaKnown RBP24.92■■□□□ 1.58
SEC11C-205ENST00000588875 VPS72Q15906 364 aa24.91■■□□□ 1.58
SEC11C-205ENST00000588875 PHF8Q9UPP1 1060 aa24.91■■□□□ 1.58
SEC11C-205ENST00000588875 PIK3C2GO75747 1445 aa24.91■■□□□ 1.58
SEC11C-205ENST00000588875 FMN2Q9NZ56 1722 aa24.91■■□□□ 1.58
SEC11C-205ENST00000588875 MPHOSPH9Q99550 1183 aa24.9■■□□□ 1.58
SEC11C-205ENST00000588875 ONECUT3O60422 494 aaPredicted RBP24.89■■□□□ 1.58
SEC11C-205ENST00000588875 PLEKHG5O94827 1062 aa24.89■■□□□ 1.58
SEC11C-205ENST00000588875 USP32Q8NFA0 1604 aa24.89■■□□□ 1.57
SEC11C-205ENST00000588875 KNDC1Q76NI1 1749 aa24.88■■□□□ 1.57
SEC11C-205ENST00000588875 KIF1AQ12756 1690 aa24.88■■□□□ 1.57
SEC11C-205ENST00000588875 TNS3Q68CZ2 1445 aa24.87■■□□□ 1.57
SEC11C-205ENST00000588875 HAP1P54257 671 aaPredicted RBP24.87■■□□□ 1.57
SEC11C-205ENST00000588875 PSME1Q06323 249 aa24.87■■□□□ 1.57
SEC11C-205ENST00000588875 C14orf93Q9H972 538 aaKnown RBP24.87■■□□□ 1.57
SEC11C-205ENST00000588875 IFT172Q9UG01 1749 aa24.86■■□□□ 1.57
SEC11C-205ENST00000588875 BRWD3Q6RI45 1802 aa24.85■■□□□ 1.57
SEC11C-205ENST00000588875 SF3B2Q13435 895 aaKnown RBP24.84■■□□□ 1.57
SEC11C-205ENST00000588875 CFAP70Q5T0N1 1121 aa24.84■■□□□ 1.57
SEC11C-205ENST00000588875 CCDC9Q9Y3X0 531 aaKnown RBP24.84■■□□□ 1.57
SEC11C-205ENST00000588875 SBNO1A3KN83 1393 aa24.83■■□□□ 1.57
SEC11C-205ENST00000588875 FAM83GA6ND36 823 aa24.83■■□□□ 1.57
SEC11C-205ENST00000588875 LMOD2Q6P5Q4 547 aa24.83■■□□□ 1.57
SEC11C-205ENST00000588875 KRT27Q7Z3Y8 459 aa24.83■■□□□ 1.57
SEC11C-205ENST00000588875 SAFB2Q14151 953 aaKnown RBP eCLIP24.82■■□□□ 1.56
SEC11C-205ENST00000588875 NRXN1Q9ULB1 1477 aa24.81■■□□□ 1.56
SEC11C-205ENST00000588875 PRAM1Q96QH2 718 aa24.8■■□□□ 1.56
SEC11C-205ENST00000588875 DHX57Q6P158 1386 aaKnown RBP24.8■■□□□ 1.56
SEC11C-205ENST00000588875 PMFBP1Q8TBY8 1022 aa24.79■■□□□ 1.56
SEC11C-205ENST00000588875 RGPD8O14715 1765 aaPredicted RBP24.79■■□□□ 1.56
SEC11C-205ENST00000588875 ARHGEF10O15013 1369 aa24.78■■□□□ 1.56
SEC11C-205ENST00000588875 PLCH1Q4KWH8 1693 aa24.76■■□□□ 1.55
SEC11C-205ENST00000588875 NWD2Q9ULI1 1742 aa24.75■■□□□ 1.55
SEC11C-205ENST00000588875 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
SEC11C-205ENST00000588875 PSDA5PKW4 1024 aaPredicted RBP24.73■■□□□ 1.55
SEC11C-205ENST00000588875 BTG4Q9NY30 223 aa24.73■■□□□ 1.55
SEC11C-205ENST00000588875 POGKQ9P215 609 aa24.73■■□□□ 1.55
SEC11C-205ENST00000588875 A0A0G2JS52 829 aa24.72■■□□□ 1.55
SEC11C-205ENST00000588875 MYT1Q01538 1121 aa24.72■■□□□ 1.55
SEC11C-205ENST00000588875 ABCA3Q99758 1704 aa24.72■■□□□ 1.55
SEC11C-205ENST00000588875 ANKARQ7Z5J8 1434 aa24.71■■□□□ 1.55
SEC11C-205ENST00000588875 BAG6P46379 1132 aa24.71■■□□□ 1.55
SEC11C-205ENST00000588875 HRCP23327 699 aa24.69■■□□□ 1.54
SEC11C-205ENST00000588875 FAM182BQ5T319 152 aa24.68■■□□□ 1.54
SEC11C-205ENST00000588875 HIRIP3Q9BW71 556 aaPredicted RBP24.68■■□□□ 1.54
SEC11C-205ENST00000588875 LRP5O75197 1615 aa24.68■■□□□ 1.54
SEC11C-205ENST00000588875 PRR36Q9H6K5 1346 aa24.67■■□□□ 1.54
SEC11C-205ENST00000588875 EN1Q05925 392 aaPredicted RBP24.67■■□□□ 1.54
SEC11C-205ENST00000588875 DLC1Q96QB1 1528 aa24.66■■□□□ 1.54
SEC11C-205ENST00000588875 TRAK1Q9UPV9 953 aa24.66■■□□□ 1.54
SEC11C-205ENST00000588875 ACIN1Q9UKV3 1341 aaKnown RBP24.65■■□□□ 1.54
SEC11C-205ENST00000588875 NRAPQ86VF7 1730 aa24.65■■□□□ 1.54
SEC11C-205ENST00000588875 SPATA31A5Q5VU36 1347 aa24.64■■□□□ 1.54
SEC11C-205ENST00000588875 SPATA31A7Q8IWB4 1347 aa24.64■■□□□ 1.54
SEC11C-205ENST00000588875 GPRASP1Q5JY77 1395 aa24.64■■□□□ 1.53
SEC11C-205ENST00000588875 MINK1Q8N4C8 1332 aaPredicted RBP24.63■■□□□ 1.53
SEC11C-205ENST00000588875 TRPM3Q9HCF6 1732 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms