RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 WAPLQ7Z5K2 1190 aa14.51□□□□□ -0.09
NEDD4L-224ENST00000588712 MINK1Q8N4C8 1332 aaPredicted RBP14.51□□□□□ -0.09
NEDD4L-224ENST00000588712 ATAD2Q6PL18 1390 aa14.51□□□□□ -0.09
NEDD4L-224ENST00000588712 PTPRUQ92729 1446 aa14.5□□□□□ -0.09
NEDD4L-224ENST00000588712 SRPK2P78362 688 aaKnown RBP14.5□□□□□ -0.09
NEDD4L-224ENST00000588712 MIER1Q8N108 512 aa14.5□□□□□ -0.09
NEDD4L-224ENST00000588712 KCNA6P17658 529 aa14.5□□□□□ -0.09
NEDD4L-224ENST00000588712 ROBO2Q9HCK4 1378 aa14.49□□□□□ -0.09
NEDD4L-224ENST00000588712 CHD2O14647 1828 aaKnown RBP14.49□□□□□ -0.09
NEDD4L-224ENST00000588712 KTN1Q86UP2 1357 aaKnown RBP14.48□□□□□ -0.09
NEDD4L-224ENST00000588712 XRN1Q8IZH2 1706 aaKnown RBP14.48□□□□□ -0.09
NEDD4L-224ENST00000588712 WASLO00401 505 aaPredicted RBP14.48□□□□□ -0.09
NEDD4L-224ENST00000588712 CDK19Q9BWU1 502 aa14.48□□□□□ -0.09
NEDD4L-224ENST00000588712 PANK3Q9H999 370 aa14.48□□□□□ -0.09
NEDD4L-224ENST00000588712 TULP4Q9NRJ4 1543 aa14.48□□□□□ -0.09
NEDD4L-224ENST00000588712 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
NEDD4L-224ENST00000588712 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
NEDD4L-224ENST00000588712 HSPA2P54652 639 aa14.46□□□□□ -0.09
NEDD4L-224ENST00000588712 TMC1Q8TDI8 760 aa14.46□□□□□ -0.09
NEDD4L-224ENST00000588712 CABP2Q9NPB3 220 aa14.46□□□□□ -0.09
NEDD4L-224ENST00000588712 KNSTRNQ9Y448 316 aa14.46□□□□□ -0.09
NEDD4L-224ENST00000588712 ADGRB2O60241 1585 aa14.45□□□□□ -0.1
NEDD4L-224ENST00000588712 CCER2I3L3R5 266 aa14.45□□□□□ -0.1
NEDD4L-224ENST00000588712 PER1O15534 1290 aaPredicted RBP14.45□□□□□ -0.1
NEDD4L-224ENST00000588712 TERF2IPQ9NYB0 399 aa14.44□□□□□ -0.1
NEDD4L-224ENST00000588712 RALBP1Q15311 655 aa14.43□□□□□ -0.1
NEDD4L-224ENST00000588712 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
NEDD4L-224ENST00000588712 NWD1Q149M9 1564 aa14.43□□□□□ -0.1
NEDD4L-224ENST00000588712 MYOM1P52179 1685 aa14.42□□□□□ -0.1
NEDD4L-224ENST00000588712 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
NEDD4L-224ENST00000588712 ANKRD36BQ8N2N9 1353 aa14.42□□□□□ -0.1
NEDD4L-224ENST00000588712 NKTRP30414 1462 aaKnown RBP14.42□□□□□ -0.1
NEDD4L-224ENST00000588712 SLC12A5Q9H2X9 1139 aa14.42□□□□□ -0.1
NEDD4L-224ENST00000588712 NPC1L1Q9UHC9 1359 aa14.42□□□□□ -0.1
NEDD4L-224ENST00000588712 NCOA3Q9Y6Q9 1424 aa14.41□□□□□ -0.1
NEDD4L-224ENST00000588712 HDGFL2Q7Z4V5 671 aaPredicted RBP14.41□□□□□ -0.1
NEDD4L-224ENST00000588712 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.4□□□□□ -0.1
NEDD4L-224ENST00000588712 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
NEDD4L-224ENST00000588712 STRCQ7RTU9 1775 aa14.39□□□□□ -0.11
NEDD4L-224ENST00000588712 PROSER2Q86WR7 435 aaPredicted RBP14.39□□□□□ -0.11
NEDD4L-224ENST00000588712 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
NEDD4L-224ENST00000588712 CABP1Q9NZU7 370 aa14.38□□□□□ -0.11
NEDD4L-224ENST00000588712 ATP7BP35670 1465 aa14.38□□□□□ -0.11
NEDD4L-224ENST00000588712 ANKARQ7Z5J8 1434 aa14.38□□□□□ -0.11
NEDD4L-224ENST00000588712 C14orf37Q86TY3 774 aa14.37□□□□□ -0.11
NEDD4L-224ENST00000588712 ADGRL3Q9HAR2 1447 aa14.37□□□□□ -0.11
NEDD4L-224ENST00000588712 CGNL1Q0VF96 1302 aa14.36□□□□□ -0.11
NEDD4L-224ENST00000588712 PPIP5K1Q6PFW1 1433 aa14.36□□□□□ -0.11
NEDD4L-224ENST00000588712 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
NEDD4L-224ENST00000588712 CARD14Q9BXL6 1004 aa14.36□□□□□ -0.11
NEDD4L-224ENST00000588712 CDC42BPGQ6DT37 1551 aa14.36□□□□□ -0.11
NEDD4L-224ENST00000588712 PLEKHG3A1L390 1219 aa14.35□□□□□ -0.11
NEDD4L-224ENST00000588712 NSD2O96028 1365 aa14.35□□□□□ -0.11
NEDD4L-224ENST00000588712 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
NEDD4L-224ENST00000588712 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
NEDD4L-224ENST00000588712 MYBBP1AQ9BQG0 1328 aaKnown RBP14.34□□□□□ -0.11
NEDD4L-224ENST00000588712 NSD3Q9BZ95 1437 aa14.34□□□□□ -0.11
NEDD4L-224ENST00000588712 A0A1W2PP64 1363 aa14.34□□□□□ -0.11
NEDD4L-224ENST00000588712 USP32Q8NFA0 1604 aa14.33□□□□□ -0.11
NEDD4L-224ENST00000588712 CC2D1BQ5T0F9 858 aaKnown RBP14.33□□□□□ -0.12
NEDD4L-224ENST00000588712 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
NEDD4L-224ENST00000588712 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
NEDD4L-224ENST00000588712 PRR36Q9H6K5 1346 aa14.31□□□□□ -0.12
NEDD4L-224ENST00000588712 DCCP43146 1447 aa14.31□□□□□ -0.12
NEDD4L-224ENST00000588712 FMN2Q9NZ56 1722 aa14.31□□□□□ -0.12
NEDD4L-224ENST00000588712 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
NEDD4L-224ENST00000588712 NALCNQ8IZF0 1738 aa14.31□□□□□ -0.12
NEDD4L-224ENST00000588712 NLRP13Q86W25 1043 aa14.3□□□□□ -0.12
NEDD4L-224ENST00000588712 TMEM94Q12767 1356 aa14.3□□□□□ -0.12
NEDD4L-224ENST00000588712 EDC4Q6P2E9 1401 aaKnown RBP14.3□□□□□ -0.12
NEDD4L-224ENST00000588712 ATF3P18847 181 aa14.3□□□□□ -0.12
NEDD4L-224ENST00000588712 TOPAZ1Q8N9V7 1692 aa14.3□□□□□ -0.12
NEDD4L-224ENST00000588712 BRD4O60885 1362 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-224ENST00000588712 CADPS2Q86UW7 1296 aa14.29□□□□□ -0.12
NEDD4L-224ENST00000588712 CNGB1Q14028 1251 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-224ENST00000588712 MORC1Q86VD1 984 aa14.29□□□□□ -0.12
NEDD4L-224ENST00000588712 MSH6P52701 1360 aa14.28□□□□□ -0.12
NEDD4L-224ENST00000588712 NGDNQ8NEJ9 315 aaKnown RBP14.28□□□□□ -0.12
NEDD4L-224ENST00000588712 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
NEDD4L-224ENST00000588712 ACEP12821 1306 aa14.28□□□□□ -0.12
NEDD4L-224ENST00000588712 POLR3AO14802 1390 aaPredicted RBP14.28□□□□□ -0.12
NEDD4L-224ENST00000588712 NUTM2FA1L443 756 aa14.27□□□□□ -0.12
NEDD4L-224ENST00000588712 STRCP1A6NGW2 1772 aa14.27□□□□□ -0.13
NEDD4L-224ENST00000588712 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
NEDD4L-224ENST00000588712 RBM33Q96EV2 1170 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-224ENST00000588712 PHF8Q9UPP1 1060 aa14.26□□□□□ -0.13
NEDD4L-224ENST00000588712 AKAP12Q02952 1782 aa14.26□□□□□ -0.13
NEDD4L-224ENST00000588712 ZNF335Q9H4Z2 1342 aaPredicted RBP14.26□□□□□ -0.13
NEDD4L-224ENST00000588712 FYB1O15117 783 aa14.26□□□□□ -0.13
NEDD4L-224ENST00000588712 TTC21AQ8NDW8 1320 aa14.25□□□□□ -0.13
NEDD4L-224ENST00000588712 MON2Q7Z3U7 1717 aa14.25□□□□□ -0.13
NEDD4L-224ENST00000588712 PPP2R1AP30153 589 aa14.24□□□□□ -0.13
NEDD4L-224ENST00000588712 ESCO1Q5FWF5 840 aa14.24□□□□□ -0.13
NEDD4L-224ENST00000588712 LRRC7Q96NW7 1537 aa14.24□□□□□ -0.13
NEDD4L-224ENST00000588712 USP6P35125 1406 aa14.24□□□□□ -0.13
NEDD4L-224ENST00000588712 PMFBP1Q8TBY8 1022 aa14.23□□□□□ -0.13
NEDD4L-224ENST00000588712 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
NEDD4L-224ENST00000588712 RGPD8O14715 1765 aaPredicted RBP14.23□□□□□ -0.13
NEDD4L-224ENST00000588712 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.22□□□□□ -0.13
NEDD4L-224ENST00000588712 TTC21BQ7Z4L5 1316 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms