RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 FOXD1Q16676 465 aa27.78■■■□□ 2.04
CCDC43-204ENST00000588687 MYOM2P54296 1465 aa27.77■■■□□ 2.04
CCDC43-204ENST00000588687 EP400Q96L91 3159 aa27.77■■■□□ 2.04
CCDC43-204ENST00000588687 ADGRF5Q8IZF2 1346 aa27.76■■■□□ 2.03
CCDC43-204ENST00000588687 CCDC144AA2RUR9 1427 aa27.75■■■□□ 2.03
CCDC43-204ENST00000588687 SRCAPQ6ZRS2 3230 aa27.74■■■□□ 2.03
CCDC43-204ENST00000588687 PIK3C2GO75747 1445 aa27.74■■■□□ 2.03
CCDC43-204ENST00000588687 RBM6P78332 1123 aaKnown RBP27.73■■■□□ 2.03
CCDC43-204ENST00000588687 QTRT2Q9H974 415 aaKnown RBP27.73■■■□□ 2.03
CCDC43-204ENST00000588687 ADAMTS2O95450 1211 aa27.72■■■□□ 2.03
CCDC43-204ENST00000588687 MARF1Q9Y4F3 1742 aaKnown RBP27.72■■■□□ 2.03
CCDC43-204ENST00000588687 FMN2Q9NZ56 1722 aa27.7■■■□□ 2.03
CCDC43-204ENST00000588687 LRPPRCP42704 1394 aaKnown RBP27.7■■■□□ 2.02
CCDC43-204ENST00000588687 ANKRD30BQ9BXX2 1392 aa27.7■■■□□ 2.02
CCDC43-204ENST00000588687 ATRNO75882 1429 aa27.67■■■□□ 2.02
CCDC43-204ENST00000588687 FNBP4Q8N3X1 1017 aaPredicted RBP27.67■■■□□ 2.02
CCDC43-204ENST00000588687 NGLY1Q96IV0 654 aa27.67■■■□□ 2.02
CCDC43-204ENST00000588687 ABCC11Q96J66 1382 aa27.67■■■□□ 2.02
CCDC43-204ENST00000588687 PLEKHH1Q9ULM0 1364 aa27.67■■■□□ 2.02
CCDC43-204ENST00000588687 NPHP3Q7Z494 1330 aa27.67■■■□□ 2.02
CCDC43-204ENST00000588687 NRXN1Q9ULB1 1477 aa27.64■■■□□ 2.02
CCDC43-204ENST00000588687 KIF1AQ12756 1690 aa27.64■■■□□ 2.02
CCDC43-204ENST00000588687 WAPLQ7Z5K2 1190 aa27.63■■■□□ 2.01
CCDC43-204ENST00000588687 MPHOSPH9Q99550 1183 aa27.63■■■□□ 2.01
CCDC43-204ENST00000588687 ESCO1Q5FWF5 840 aa27.62■■■□□ 2.01
CCDC43-204ENST00000588687 USP21Q9UK80 565 aa27.62■■■□□ 2.01
CCDC43-204ENST00000588687 BCL9LQ86UU0 1499 aa27.62■■■□□ 2.01
CCDC43-204ENST00000588687 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.61■■■□□ 2.01
CCDC43-204ENST00000588687 YTHDC2Q9H6S0 1430 aaKnown RBP27.61■■■□□ 2.01
CCDC43-204ENST00000588687 RGL3Q3MIN7 710 aa27.61■■■□□ 2.01
CCDC43-204ENST00000588687 STK26Q9P289 416 aa27.59■■■□□ 2.01
CCDC43-204ENST00000588687 TRPC5Q9UL62 973 aaPredicted RBP27.59■■■□□ 2.01
CCDC43-204ENST00000588687 FOXO3O43524 673 aa27.58■■■□□ 2.01
CCDC43-204ENST00000588687 TMEM132EQ6IEE7 984 aa27.58■■■□□ 2.01
CCDC43-204ENST00000588687 XPCQ01831 940 aaPredicted RBP27.57■■■□□ 2
CCDC43-204ENST00000588687 ATAD2Q6PL18 1390 aa27.56■■■□□ 2
CCDC43-204ENST00000588687 RGPD8O14715 1765 aaPredicted RBP27.55■■■□□ 2
CCDC43-204ENST00000588687 USP32Q8NFA0 1604 aa27.54■■■□□ 2
CCDC43-204ENST00000588687 NUTM2FA1L443 756 aa27.53■■■□□ 2
CCDC43-204ENST00000588687 SLIT2O94813 1529 aa27.52■■■□□ 2
CCDC43-204ENST00000588687 ABCA3Q99758 1704 aa27.52■■■□□ 2
CCDC43-204ENST00000588687 GLI3P10071 1580 aa27.51■■□□□ 1.99
CCDC43-204ENST00000588687 SPATA31A3Q5VYP0 1347 aa27.5■■□□□ 1.99
CCDC43-204ENST00000588687 C14orf93Q9H972 538 aaKnown RBP27.5■■□□□ 1.99
CCDC43-204ENST00000588687 SIRT1Q96EB6 747 aa27.49■■□□□ 1.99
CCDC43-204ENST00000588687 ADGRB2O60241 1585 aa27.48■■□□□ 1.99
CCDC43-204ENST00000588687 DLC1Q96QB1 1528 aa27.47■■□□□ 1.99
CCDC43-204ENST00000588687 ADGRB1O14514 1584 aa27.47■■□□□ 1.99
CCDC43-204ENST00000588687 TNS3Q68CZ2 1445 aa27.46■■□□□ 1.99
CCDC43-204ENST00000588687 PLCH1Q4KWH8 1693 aa27.44■■□□□ 1.98
CCDC43-204ENST00000588687 RALGAPBQ86X10 1494 aa27.44■■□□□ 1.98
CCDC43-204ENST00000588687 CFAP70Q5T0N1 1121 aa27.43■■□□□ 1.98
CCDC43-204ENST00000588687 GJD4Q96KN9 370 aaPredicted RBP27.42■■□□□ 1.98
CCDC43-204ENST00000588687 NWD2Q9ULI1 1742 aa27.41■■□□□ 1.98
CCDC43-204ENST00000588687 DHX57Q6P158 1386 aaKnown RBP27.4■■□□□ 1.98
CCDC43-204ENST00000588687 BRWD3Q6RI45 1802 aa27.4■■□□□ 1.98
CCDC43-204ENST00000588687 TRPM3Q9HCF6 1732 aaPredicted RBP27.4■■□□□ 1.98
CCDC43-204ENST00000588687 ACIN1Q9UKV3 1341 aaKnown RBP27.4■■□□□ 1.98
CCDC43-204ENST00000588687 KRT28Q7Z3Y7 464 aa27.39■■□□□ 1.98
CCDC43-204ENST00000588687 RAB3GAP2Q9H2M9 1393 aa27.38■■□□□ 1.97
CCDC43-204ENST00000588687 PHF8Q9UPP1 1060 aa27.38■■□□□ 1.97
CCDC43-204ENST00000588687 ANKARQ7Z5J8 1434 aa27.38■■□□□ 1.97
CCDC43-204ENST00000588687 SBNO1A3KN83 1393 aa27.37■■□□□ 1.97
CCDC43-204ENST00000588687 UNC5CLQ8IV45 518 aa27.37■■□□□ 1.97
CCDC43-204ENST00000588687 PRAM1Q96QH2 718 aa27.37■■□□□ 1.97
CCDC43-204ENST00000588687 ALS2Q96Q42 1657 aa27.34■■□□□ 1.97
CCDC43-204ENST00000588687 NRAPQ86VF7 1730 aa27.33■■□□□ 1.97
CCDC43-204ENST00000588687 CRYBG1Q9Y4K1 1723 aa27.32■■□□□ 1.96
CCDC43-204ENST00000588687 SAFB2Q14151 953 aaKnown RBP eCLIP27.31■■□□□ 1.96
CCDC43-204ENST00000588687 ARHGEF10O15013 1369 aa27.31■■□□□ 1.96
CCDC43-204ENST00000588687 CABLES1Q8TDN4 633 aa27.3■■□□□ 1.96
CCDC43-204ENST00000588687 TULP4Q9NRJ4 1543 aa27.29■■□□□ 1.96
CCDC43-204ENST00000588687 PSME1Q06323 249 aa27.28■■□□□ 1.96
CCDC43-204ENST00000588687 CCDC125Q86Z20 511 aa27.28■■□□□ 1.96
CCDC43-204ENST00000588687 BLMP54132 1417 aaPredicted RBP27.27■■□□□ 1.96
CCDC43-204ENST00000588687 ARHGEF28Q8N1W1 1705 aaKnown RBP27.27■■□□□ 1.96
CCDC43-204ENST00000588687 PRR36Q9H6K5 1346 aa27.26■■□□□ 1.95
CCDC43-204ENST00000588687 VPS72Q15906 364 aa27.26■■□□□ 1.95
CCDC43-204ENST00000588687 PMFBP1Q8TBY8 1022 aa27.23■■□□□ 1.95
CCDC43-204ENST00000588687 ONECUT3O60422 494 aaPredicted RBP27.22■■□□□ 1.95
CCDC43-204ENST00000588687 POGKQ9P215 609 aa27.22■■□□□ 1.95
CCDC43-204ENST00000588687 COL14A1Q05707 1796 aaKnown RBP27.22■■□□□ 1.95
CCDC43-204ENST00000588687 SEPT12Q8IYM1 358 aa27.2■■□□□ 1.94
CCDC43-204ENST00000588687 HIRIP3Q9BW71 556 aaPredicted RBP27.2■■□□□ 1.94
CCDC43-204ENST00000588687 ZRANB1Q9UGI0 708 aa27.2■■□□□ 1.94
CCDC43-204ENST00000588687 TRAK1Q9UPV9 953 aa27.2■■□□□ 1.94
CCDC43-204ENST00000588687 EIF3AQ14152 1382 aaKnown RBP27.2■■□□□ 1.94
CCDC43-204ENST00000588687 HAP1P54257 671 aaPredicted RBP27.19■■□□□ 1.94
CCDC43-204ENST00000588687 ATP7BP35670 1465 aa27.19■■□□□ 1.94
CCDC43-204ENST00000588687 ITSN1Q15811 1721 aa27.19■■□□□ 1.94
CCDC43-204ENST00000588687 FAM83GA6ND36 823 aa27.18■■□□□ 1.94
CCDC43-204ENST00000588687 MINK1Q8N4C8 1332 aaPredicted RBP27.17■■□□□ 1.94
CCDC43-204ENST00000588687 PLEKHG5O94827 1062 aa27.17■■□□□ 1.94
CCDC43-204ENST00000588687 LMOD2Q6P5Q4 547 aa27.16■■□□□ 1.94
CCDC43-204ENST00000588687 TOPAZ1Q8N9V7 1692 aa27.15■■□□□ 1.94
CCDC43-204ENST00000588687 WASLO00401 505 aaPredicted RBP27.14■■□□□ 1.94
CCDC43-204ENST00000588687 DCAF11Q8TEB1 546 aa27.14■■□□□ 1.94
CCDC43-204ENST00000588687 THSD7AQ9UPZ6 1657 aa27.14■■□□□ 1.93
CCDC43-204ENST00000588687 GPRASP1Q5JY77 1395 aa27.13■■□□□ 1.93
CCDC43-204ENST00000588687 PHRF1Q9P1Y6 1649 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms