RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MARF1Q9Y4F3 1742 aaKnown RBP20.41■□□□□ 0.86
HDAC5-208ENST00000588419 NUTM2FA1L443 756 aa20.41■□□□□ 0.86
HDAC5-208ENST00000588419 RGPD8O14715 1765 aaPredicted RBP20.4■□□□□ 0.86
HDAC5-208ENST00000588419 COL22A1Q8NFW1 1626 aaPredicted RBP20.4■□□□□ 0.86
HDAC5-208ENST00000588419 FMN2Q9NZ56 1722 aa20.4■□□□□ 0.86
HDAC5-208ENST00000588419 ANKRD30BQ9BXX2 1392 aa20.39■□□□□ 0.85
HDAC5-208ENST00000588419 ESCO1Q5FWF5 840 aa20.39■□□□□ 0.85
HDAC5-208ENST00000588419 NGLY1Q96IV0 654 aa20.39■□□□□ 0.85
HDAC5-208ENST00000588419 CDK12Q9NYV4 1490 aaPredicted RBP20.38■□□□□ 0.85
HDAC5-208ENST00000588419 RGS12O14924 1447 aa20.38■□□□□ 0.85
HDAC5-208ENST00000588419 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
HDAC5-208ENST00000588419 TMEM132EQ6IEE7 984 aa20.38■□□□□ 0.85
HDAC5-208ENST00000588419 WAPLQ7Z5K2 1190 aa20.38■□□□□ 0.85
HDAC5-208ENST00000588419 XPCQ01831 940 aaPredicted RBP20.37■□□□□ 0.85
HDAC5-208ENST00000588419 UPF1Q92900 1129 aaKnown RBP eCLIP20.37■□□□□ 0.85
HDAC5-208ENST00000588419 QTRT2Q9H974 415 aaKnown RBP20.37■□□□□ 0.85
HDAC5-208ENST00000588419 PIK3C2GO75747 1445 aa20.36■□□□□ 0.85
HDAC5-208ENST00000588419 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
HDAC5-208ENST00000588419 KIF1AQ12756 1690 aa20.35■□□□□ 0.85
HDAC5-208ENST00000588419 LRPPRCP42704 1394 aaKnown RBP20.35■□□□□ 0.85
HDAC5-208ENST00000588419 TECPR2O15040 1411 aa20.35■□□□□ 0.85
HDAC5-208ENST00000588419 NPHP3Q7Z494 1330 aa20.34■□□□□ 0.85
HDAC5-208ENST00000588419 PXDNQ92626 1479 aa20.34■□□□□ 0.85
HDAC5-208ENST00000588419 RBM6P78332 1123 aaKnown RBP20.33■□□□□ 0.85
HDAC5-208ENST00000588419 YTHDC2Q9H6S0 1430 aaKnown RBP20.33■□□□□ 0.84
HDAC5-208ENST00000588419 USP21Q9UK80 565 aa20.32■□□□□ 0.84
HDAC5-208ENST00000588419 FOXO3O43524 673 aa20.31■□□□□ 0.84
HDAC5-208ENST00000588419 ABCC11Q96J66 1382 aa20.29■□□□□ 0.84
HDAC5-208ENST00000588419 MYOM2P54296 1465 aa20.29■□□□□ 0.84
HDAC5-208ENST00000588419 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
HDAC5-208ENST00000588419 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.84
HDAC5-208ENST00000588419 PLEKHG5O94827 1062 aa20.26■□□□□ 0.83
HDAC5-208ENST00000588419 TRPC5Q9UL62 973 aaPredicted RBP20.26■□□□□ 0.83
HDAC5-208ENST00000588419 CFAP70Q5T0N1 1121 aa20.25■□□□□ 0.83
HDAC5-208ENST00000588419 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.24■□□□□ 0.83
HDAC5-208ENST00000588419 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
HDAC5-208ENST00000588419 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
HDAC5-208ENST00000588419 ABCA3Q99758 1704 aa20.24■□□□□ 0.83
HDAC5-208ENST00000588419 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
HDAC5-208ENST00000588419 ATRNO75882 1429 aa20.23■□□□□ 0.83
HDAC5-208ENST00000588419 C14orf93Q9H972 538 aaKnown RBP20.22■□□□□ 0.83
HDAC5-208ENST00000588419 ACIN1Q9UKV3 1341 aaKnown RBP20.22■□□□□ 0.83
HDAC5-208ENST00000588419 FNBP4Q8N3X1 1017 aaPredicted RBP20.21■□□□□ 0.83
HDAC5-208ENST00000588419 PLCH1Q4KWH8 1693 aa20.21■□□□□ 0.83
HDAC5-208ENST00000588419 ATAD2Q6PL18 1390 aa20.21■□□□□ 0.83
HDAC5-208ENST00000588419 HAP1P54257 671 aaPredicted RBP20.2■□□□□ 0.82
HDAC5-208ENST00000588419 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
HDAC5-208ENST00000588419 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
HDAC5-208ENST00000588419 POGKQ9P215 609 aa20.19■□□□□ 0.82
HDAC5-208ENST00000588419 LMOD2Q6P5Q4 547 aa20.18■□□□□ 0.82
HDAC5-208ENST00000588419 PHF8Q9UPP1 1060 aa20.18■□□□□ 0.82
HDAC5-208ENST00000588419 SPATA31A3Q5VYP0 1347 aa20.18■□□□□ 0.82
HDAC5-208ENST00000588419 BRWD3Q6RI45 1802 aa20.18■□□□□ 0.82
HDAC5-208ENST00000588419 TNS3Q68CZ2 1445 aa20.18■□□□□ 0.82
HDAC5-208ENST00000588419 BCL9LQ86UU0 1499 aa20.18■□□□□ 0.82
HDAC5-208ENST00000588419 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
HDAC5-208ENST00000588419 KDM2AQ9Y2K7 1162 aa20.17■□□□□ 0.82
HDAC5-208ENST00000588419 ADGRB2O60241 1585 aa20.17■□□□□ 0.82
HDAC5-208ENST00000588419 ADGRB1O14514 1584 aa20.16■□□□□ 0.82
HDAC5-208ENST00000588419 TRAK1Q9UPV9 953 aa20.15■□□□□ 0.82
HDAC5-208ENST00000588419 GLI3P10071 1580 aa20.15■□□□□ 0.82
HDAC5-208ENST00000588419 ARHGEF28Q8N1W1 1705 aaKnown RBP20.14■□□□□ 0.81
HDAC5-208ENST00000588419 PMFBP1Q8TBY8 1022 aa20.14■□□□□ 0.81
HDAC5-208ENST00000588419 SIRT1Q96EB6 747 aa20.14■□□□□ 0.81
HDAC5-208ENST00000588419 HIRIP3Q9BW71 556 aaPredicted RBP20.14■□□□□ 0.81
HDAC5-208ENST00000588419 NWD2Q9ULI1 1742 aa20.13■□□□□ 0.81
HDAC5-208ENST00000588419 PSME1Q06323 249 aa20.13■□□□□ 0.81
HDAC5-208ENST00000588419 CABLES1Q8TDN4 633 aa20.13■□□□□ 0.81
HDAC5-208ENST00000588419 TRPM3Q9HCF6 1732 aaPredicted RBP20.13■□□□□ 0.81
HDAC5-208ENST00000588419 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
HDAC5-208ENST00000588419 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
HDAC5-208ENST00000588419 SLIT2O94813 1529 aa20.12■□□□□ 0.81
HDAC5-208ENST00000588419 RALGAPBQ86X10 1494 aa20.11■□□□□ 0.81
HDAC5-208ENST00000588419 ITSN1Q15811 1721 aa20.11■□□□□ 0.81
HDAC5-208ENST00000588419 GJD4Q96KN9 370 aaPredicted RBP20.11■□□□□ 0.81
HDAC5-208ENST00000588419 ANKARQ7Z5J8 1434 aa20.1■□□□□ 0.81
HDAC5-208ENST00000588419 UNC5CLQ8IV45 518 aa20.1■□□□□ 0.81
HDAC5-208ENST00000588419 CCDC9Q9Y3X0 531 aaKnown RBP20.09■□□□□ 0.81
HDAC5-208ENST00000588419 ALS2Q96Q42 1657 aa20.09■□□□□ 0.81
HDAC5-208ENST00000588419 TULP4Q9NRJ4 1543 aa20.08■□□□□ 0.81
HDAC5-208ENST00000588419 SBNO1A3KN83 1393 aa20.08■□□□□ 0.8
HDAC5-208ENST00000588419 ARHGEF10O15013 1369 aa20.08■□□□□ 0.8
HDAC5-208ENST00000588419 NRAPQ86VF7 1730 aa20.07■□□□□ 0.8
HDAC5-208ENST00000588419 EIF3AQ14152 1382 aaKnown RBP20.06■□□□□ 0.8
HDAC5-208ENST00000588419 CRYBG1Q9Y4K1 1723 aa20.04■□□□□ 0.8
HDAC5-208ENST00000588419 EP400Q96L91 3159 aa20.03■□□□□ 0.8
HDAC5-208ENST00000588419 A0A0G2JS52 829 aa20.03■□□□□ 0.8
HDAC5-208ENST00000588419 MYT1Q01538 1121 aa20.03■□□□□ 0.8
HDAC5-208ENST00000588419 GPRASP1Q5JY77 1395 aa20.03■□□□□ 0.8
HDAC5-208ENST00000588419 COL14A1Q05707 1796 aaKnown RBP20.03■□□□□ 0.8
HDAC5-208ENST00000588419 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
HDAC5-208ENST00000588419 WASLO00401 505 aaPredicted RBP20■□□□□ 0.79
HDAC5-208ENST00000588419 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
HDAC5-208ENST00000588419 NGDNQ8NEJ9 315 aaKnown RBP20■□□□□ 0.79
HDAC5-208ENST00000588419 KIAA1210Q9ULL0 1709 aa19.99■□□□□ 0.79
HDAC5-208ENST00000588419 PHRF1Q9P1Y6 1649 aaKnown RBP19.99■□□□□ 0.79
HDAC5-208ENST00000588419 VPS72Q15906 364 aa19.99■□□□□ 0.79
HDAC5-208ENST00000588419 SEPT12Q8IYM1 358 aa19.99■□□□□ 0.79
HDAC5-208ENST00000588419 TOPAZ1Q8N9V7 1692 aa19.98■□□□□ 0.79
HDAC5-208ENST00000588419 ATP7BP35670 1465 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms