RNA–Protein interactions for RNA: ENST00000588337.5

KDM4B-205, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-205ENST00000588337 DDX17Q92841 729 aaKnown RBP39.49■■■■□ 3.91
KDM4B-205ENST00000588337 PLEKHH1Q9ULM0 1364 aa39.48■■■■□ 3.91
KDM4B-205ENST00000588337 CFAP70Q5T0N1 1121 aa39.47■■■■□ 3.91
KDM4B-205ENST00000588337 ORAI2Q96SN7 254 aa39.45■■■■□ 3.91
KDM4B-205ENST00000588337 FMN2Q9NZ56 1722 aa39.43■■■■□ 3.9
KDM4B-205ENST00000588337 POTEAQ6S8J7 498 aa39.41■■■■□ 3.9
KDM4B-205ENST00000588337 DHX57Q6P158 1386 aaKnown RBP39.41■■■■□ 3.9
KDM4B-205ENST00000588337 LRRC59Q96AG4 307 aaKnown RBP39.4■■■■□ 3.9
KDM4B-205ENST00000588337 ADGRB1O14514 1584 aa39.4■■■■□ 3.9
KDM4B-205ENST00000588337 PNPLA6Q8IY17 1366 aa39.37■■■■□ 3.89
KDM4B-205ENST00000588337 SIRT1Q96EB6 747 aa39.37■■■■□ 3.89
KDM4B-205ENST00000588337 MEX3CQ5U5Q3 659 aaKnown RBP39.36■■■■□ 3.89
KDM4B-205ENST00000588337 DLC1Q96QB1 1528 aa39.35■■■■□ 3.89
KDM4B-205ENST00000588337 DCAF11Q8TEB1 546 aa39.35■■■■□ 3.89
KDM4B-205ENST00000588337 KDM2AQ9Y2K7 1162 aa39.34■■■■□ 3.89
KDM4B-205ENST00000588337 SOS2Q07890 1332 aaPredicted RBP39.34■■■■□ 3.89
KDM4B-205ENST00000588337 NUTM2BA6NNL0 878 aaPredicted RBP39.32■■■■□ 3.89
KDM4B-205ENST00000588337 NUTM2EB1AL46 878 aaPredicted RBP39.32■■■■□ 3.89
KDM4B-205ENST00000588337 NUTM2AQ8IVF1 878 aaPredicted RBP39.32■■■■□ 3.89
KDM4B-205ENST00000588337 ESCO1Q5FWF5 840 aa39.3■■■■□ 3.88
KDM4B-205ENST00000588337 NUTM2FA1L443 756 aa39.28■■■■□ 3.88
KDM4B-205ENST00000588337 RGPD8O14715 1765 aaPredicted RBP39.28■■■■□ 3.88
KDM4B-205ENST00000588337 KIF1AQ12756 1690 aa39.27■■■■□ 3.88
KDM4B-205ENST00000588337 STAC3Q96MF2 364 aa39.27■■■■□ 3.88
KDM4B-205ENST00000588337 PXDNQ92626 1479 aa39.26■■■■□ 3.88
KDM4B-205ENST00000588337 PRAM1Q96QH2 718 aa39.26■■■■□ 3.88
KDM4B-205ENST00000588337 NPHP3Q7Z494 1330 aa39.24■■■■□ 3.87
KDM4B-205ENST00000588337 COL22A1Q8NFW1 1626 aaPredicted RBP39.24■■■■□ 3.87
KDM4B-205ENST00000588337 ADGRB2O60241 1585 aa39.23■■■■□ 3.87
KDM4B-205ENST00000588337 SAFB2Q14151 953 aaKnown RBP eCLIP39.2■■■■□ 3.87
KDM4B-205ENST00000588337 ZNF772Q68DY9 489 aaPredicted RBP39.19■■■■□ 3.86
KDM4B-205ENST00000588337 ARHGEF28Q8N1W1 1705 aaKnown RBP39.17■■■■□ 3.86
KDM4B-205ENST00000588337 FOXO3O43524 673 aa39.17■■■■□ 3.86
KDM4B-205ENST00000588337 TRAK1Q9UPV9 953 aa39.17■■■■□ 3.86
KDM4B-205ENST00000588337 POGKQ9P215 609 aa39.16■■■■□ 3.86
KDM4B-205ENST00000588337 USP32Q8NFA0 1604 aa39.15■■■■□ 3.86
KDM4B-205ENST00000588337 KIAA1210Q9ULL0 1709 aa39.15■■■■□ 3.86
KDM4B-205ENST00000588337 XPCQ01831 940 aaPredicted RBP39.13■■■■□ 3.85
KDM4B-205ENST00000588337 AFF2P51816 1311 aa39.13■■■■□ 3.85
KDM4B-205ENST00000588337 C8orf37Q96NL8 207 aa39.09■■■■□ 3.85
KDM4B-205ENST00000588337 ANKARQ7Z5J8 1434 aa39.06■■■■□ 3.84
KDM4B-205ENST00000588337 MARF1Q9Y4F3 1742 aaKnown RBP39.06■■■■□ 3.84
KDM4B-205ENST00000588337 ADAMTS2O95450 1211 aa39.06■■■■□ 3.84
KDM4B-205ENST00000588337 HIRIP3Q9BW71 556 aaPredicted RBP39.03■■■■□ 3.84
KDM4B-205ENST00000588337 PHF8Q9UPP1 1060 aa39.03■■■■□ 3.84
KDM4B-205ENST00000588337 MINK1Q8N4C8 1332 aaPredicted RBP39.03■■■■□ 3.84
KDM4B-205ENST00000588337 TULP4Q9NRJ4 1543 aa39■■■■□ 3.83
KDM4B-205ENST00000588337 SPATA31A3Q5VYP0 1347 aa38.98■■■■□ 3.83
KDM4B-205ENST00000588337 KRT28Q7Z3Y7 464 aa38.97■■■■□ 3.83
KDM4B-205ENST00000588337 EIF3AQ14152 1382 aaKnown RBP38.96■■■■□ 3.83
KDM4B-205ENST00000588337 RXRBP28702 533 aa38.96■■■■□ 3.83
KDM4B-205ENST00000588337 NGLY1Q96IV0 654 aa38.96■■■■□ 3.83
KDM4B-205ENST00000588337 CDK12Q9NYV4 1490 aaPredicted RBP38.94■■■■□ 3.82
KDM4B-205ENST00000588337 TNS3Q68CZ2 1445 aa38.94■■■■□ 3.82
KDM4B-205ENST00000588337 WASLO00401 505 aaPredicted RBP38.92■■■■□ 3.82
KDM4B-205ENST00000588337 ITSN1Q15811 1721 aa38.92■■■■□ 3.82
KDM4B-205ENST00000588337 PRR36Q9H6K5 1346 aa38.91■■■■□ 3.82
KDM4B-205ENST00000588337 TRPM3Q9HCF6 1732 aaPredicted RBP38.9■■■■□ 3.82
KDM4B-205ENST00000588337 PMFBP1Q8TBY8 1022 aa38.9■■■■□ 3.82
KDM4B-205ENST00000588337 ABCA3Q99758 1704 aa38.89■■■■□ 3.82
KDM4B-205ENST00000588337 NBPF1Q3BBV0 1214 aa38.89■■■■□ 3.82
KDM4B-205ENST00000588337 SIN3AQ96ST3 1273 aa38.89■■■■□ 3.82
KDM4B-205ENST00000588337 QTRT2Q9H974 415 aaKnown RBP38.89■■■■□ 3.82
KDM4B-205ENST00000588337 SBNO1A3KN83 1393 aa38.88■■■■□ 3.81
KDM4B-205ENST00000588337 PSME1Q06323 249 aa38.88■■■■□ 3.81
KDM4B-205ENST00000588337 L3MBTL2Q969R5 705 aa38.87■■■■□ 3.81
KDM4B-205ENST00000588337 FNBP4Q8N3X1 1017 aaPredicted RBP38.86■■■■□ 3.81
KDM4B-205ENST00000588337 ATP7BP35670 1465 aa38.86■■■■□ 3.81
KDM4B-205ENST00000588337 USP21Q9UK80 565 aa38.85■■■■□ 3.81
KDM4B-205ENST00000588337 TRPM1Q7Z4N2 1603 aa38.83■■■■□ 3.81
KDM4B-205ENST00000588337 ALS2Q96Q42 1657 aa38.82■■■■□ 3.81
KDM4B-205ENST00000588337 RBM6P78332 1123 aaKnown RBP38.82■■■■□ 3.8
KDM4B-205ENST00000588337 RGS12O14924 1447 aa38.81■■■■□ 3.8
KDM4B-205ENST00000588337 TOPAZ1Q8N9V7 1692 aa38.81■■■■□ 3.8
KDM4B-205ENST00000588337 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.8■■■■□ 3.8
KDM4B-205ENST00000588337 ARHGEF10O15013 1369 aa38.8■■■■□ 3.8
KDM4B-205ENST00000588337 ATRNO75882 1429 aa38.79■■■■□ 3.8
KDM4B-205ENST00000588337 NEUROD1Q13562 356 aa38.78■■■■□ 3.8
KDM4B-205ENST00000588337 BCL9LQ86UU0 1499 aa38.78■■■■□ 3.8
KDM4B-205ENST00000588337 QRICH2Q9H0J4 1663 aa38.78■■■■□ 3.8
KDM4B-205ENST00000588337 TRPC5Q9UL62 973 aaPredicted RBP38.76■■■■□ 3.8
KDM4B-205ENST00000588337 GPRASP1Q5JY77 1395 aa38.75■■■■□ 3.79
KDM4B-205ENST00000588337 LMOD2Q6P5Q4 547 aa38.74■■■■□ 3.79
KDM4B-205ENST00000588337 NUDT16Q96DE0 195 aaKnown RBP38.73■■■■□ 3.79
KDM4B-205ENST00000588337 CABLES1Q8TDN4 633 aa38.72■■■■□ 3.79
KDM4B-205ENST00000588337 CDK19Q9BWU1 502 aa38.72■■■■□ 3.79
KDM4B-205ENST00000588337 SLIT2O94813 1529 aa38.72■■■■□ 3.79
KDM4B-205ENST00000588337 PLCH1Q4KWH8 1693 aa38.71■■■■□ 3.79
KDM4B-205ENST00000588337 CENPJQ9HC77 1338 aaPredicted RBP38.69■■■■□ 3.78
KDM4B-205ENST00000588337 NGDNQ8NEJ9 315 aaKnown RBP38.69■■■■□ 3.78
KDM4B-205ENST00000588337 CRYBG1Q9Y4K1 1723 aa38.69■■■■□ 3.78
KDM4B-205ENST00000588337 PLEKHG5O94827 1062 aa38.68■■■■□ 3.78
KDM4B-205ENST00000588337 HAP1P54257 671 aaPredicted RBP38.68■■■■□ 3.78
KDM4B-205ENST00000588337 NWD2Q9ULI1 1742 aa38.67■■■■□ 3.78
KDM4B-205ENST00000588337 TRIM26Q12899 539 aaPredicted RBP38.67■■■■□ 3.78
KDM4B-205ENST00000588337 UPF1Q92900 1129 aaKnown RBP eCLIP38.63■■■■□ 3.77
KDM4B-205ENST00000588337 POLR3AO14802 1390 aaPredicted RBP38.6■■■■□ 3.77
KDM4B-205ENST00000588337 ROCK2O75116 1388 aaKnown RBP38.6■■■■□ 3.77
KDM4B-205ENST00000588337 UNC5CLQ8IV45 518 aa38.6■■■■□ 3.77
KDM4B-205ENST00000588337 CCDC61Q9Y6R9 512 aa38.6■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms