RNA–Protein interactions for RNA: ENST00000587976.5

ACBD4-209, Transcript of acyl-CoA binding domain containing 4, human

TSL 3

Gene ACBD4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACBD4-209	ENST00000587976	NGLY1	Q96IV0	654 aa		32.84	■■■□□ 2.85
ACBD4-209	ENST00000587976	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.83	■■■□□ 2.85
ACBD4-209	ENST00000587976	CCDC144A	A2RUR9	1427 aa		32.83	■■■□□ 2.85
ACBD4-209	ENST00000587976	TECPR2	O15040	1411 aa		32.82	■■■□□ 2.84
ACBD4-209	ENST00000587976	IFT172	Q9UG01	1749 aa		32.81	■■■□□ 2.84
ACBD4-209	ENST00000587976	PXDN	Q92626	1479 aa		32.78	■■■□□ 2.84
ACBD4-209	ENST00000587976	RGL3	Q3MIN7	710 aa		32.77	■■■□□ 2.84
ACBD4-209	ENST00000587976	ESCO1	Q5FWF5	840 aa		32.77	■■■□□ 2.84
ACBD4-209	ENST00000587976	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.77	■■■□□ 2.84
ACBD4-209	ENST00000587976	MPHOSPH9	Q99550	1183 aa		32.77	■■■□□ 2.84
ACBD4-209	ENST00000587976	ANKRD30B	Q9BXX2	1392 aa		32.77	■■■□□ 2.84
ACBD4-209	ENST00000587976	NPHP3	Q7Z494	1330 aa		32.77	■■■□□ 2.84
ACBD4-209	ENST00000587976	MYOM2	P54296	1465 aa		32.76	■■■□□ 2.84
ACBD4-209	ENST00000587976	LRPPRC	P42704	1394 aa	Known RBP	32.76	■■■□□ 2.83
ACBD4-209	ENST00000587976	WAPL	Q7Z5K2	1190 aa		32.75	■■■□□ 2.83
ACBD4-209	ENST00000587976	USP21	Q9UK80	565 aa		32.75	■■■□□ 2.83
ACBD4-209	ENST00000587976	ABCC11	Q96J66	1382 aa		32.74	■■■□□ 2.83
ACBD4-209	ENST00000587976	STK26	Q9P289	416 aa		32.73	■■■□□ 2.83
ACBD4-209	ENST00000587976	PIK3C2G	O75747	1445 aa		32.73	■■■□□ 2.83
ACBD4-209	ENST00000587976	KNDC1	Q76NI1	1749 aa		32.72	■■■□□ 2.83
ACBD4-209	ENST00000587976	TRPC5	Q9UL62	973 aa	Predicted RBP	32.71	■■■□□ 2.83
ACBD4-209	ENST00000587976	PLEKHH1	Q9ULM0	1364 aa		32.7	■■■□□ 2.83
ACBD4-209	ENST00000587976	ATRN	O75882	1429 aa		32.7	■■■□□ 2.83
ACBD4-209	ENST00000587976	FOXO3	O43524	673 aa		32.7	■■■□□ 2.83
ACBD4-209	ENST00000587976	TMEM132E	Q6IEE7	984 aa		32.7	■■■□□ 2.83
ACBD4-209	ENST00000587976	XPC	Q01831	940 aa	Predicted RBP	32.67	■■■□□ 2.82
ACBD4-209	ENST00000587976	NUTM2F	A1L443	756 aa		32.65	■■■□□ 2.82
ACBD4-209	ENST00000587976	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.65	■■■□□ 2.82
ACBD4-209	ENST00000587976	BCL9L	Q86UU0	1499 aa		32.65	■■■□□ 2.82
ACBD4-209	ENST00000587976	MARF1	Q9Y4F3	1742 aa	Known RBP	32.65	■■■□□ 2.82
ACBD4-209	ENST00000587976	FMN2	Q9NZ56	1722 aa		32.64	■■■□□ 2.82
ACBD4-209	ENST00000587976	ATAD2	Q6PL18	1390 aa		32.61	■■■□□ 2.81
ACBD4-209	ENST00000587976	SIRT1	Q96EB6	747 aa		32.61	■■■□□ 2.81
ACBD4-209	ENST00000587976	NRXN1	Q9ULB1	1477 aa		32.6	■■■□□ 2.81
ACBD4-209	ENST00000587976	C14orf93	Q9H972	538 aa	Known RBP	32.59	■■■□□ 2.81
ACBD4-209	ENST00000587976	EP400	Q96L91	3159 aa		32.58	■■■□□ 2.81
ACBD4-209	ENST00000587976	KIF1A	Q12756	1690 aa		32.57	■■■□□ 2.8
ACBD4-209	ENST00000587976	SPATA31A3	Q5VYP0	1347 aa		32.56	■■■□□ 2.8
ACBD4-209	ENST00000587976	SRCAP	Q6ZRS2	3230 aa		32.53	■■■□□ 2.8
ACBD4-209	ENST00000587976	ACIN1	Q9UKV3	1341 aa	Known RBP	32.52	■■■□□ 2.8
ACBD4-209	ENST00000587976	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.51	■■■□□ 2.8
ACBD4-209	ENST00000587976	CFAP70	Q5T0N1	1121 aa		32.51	■■■□□ 2.79
ACBD4-209	ENST00000587976	GJD4	Q96KN9	370 aa	Predicted RBP	32.51	■■■□□ 2.79
ACBD4-209	ENST00000587976	SLIT2	O94813	1529 aa		32.51	■■■□□ 2.79
ACBD4-209	ENST00000587976	RGPD8	O14715	1765 aa	Predicted RBP	32.5	■■■□□ 2.79
ACBD4-209	ENST00000587976	KRT28	Q7Z3Y7	464 aa		32.49	■■■□□ 2.79
ACBD4-209	ENST00000587976	DHX57	Q6P158	1386 aa	Known RBP	32.47	■■■□□ 2.79
ACBD4-209	ENST00000587976	USP32	Q8NFA0	1604 aa		32.45	■■■□□ 2.79
ACBD4-209	ENST00000587976	UNC5CL	Q8IV45	518 aa		32.45	■■■□□ 2.79
ACBD4-209	ENST00000587976	PHF8	Q9UPP1	1060 aa		32.45	■■■□□ 2.79
ACBD4-209	ENST00000587976	GLI3	P10071	1580 aa		32.44	■■■□□ 2.78
ACBD4-209	ENST00000587976	TNS3	Q68CZ2	1445 aa		32.43	■■■□□ 2.78
ACBD4-209	ENST00000587976	RALGAPB	Q86X10	1494 aa		32.42	■■■□□ 2.78
ACBD4-209	ENST00000587976	PRAM1	Q96QH2	718 aa		32.42	■■■□□ 2.78
ACBD4-209	ENST00000587976	DLC1	Q96QB1	1528 aa		32.41	■■■□□ 2.78
ACBD4-209	ENST00000587976	CCDC125	Q86Z20	511 aa		32.39	■■■□□ 2.78
ACBD4-209	ENST00000587976	SBNO1	A3KN83	1393 aa		32.39	■■■□□ 2.78
ACBD4-209	ENST00000587976	ADGRB1	O14514	1584 aa		32.38	■■■□□ 2.77
ACBD4-209	ENST00000587976	PSME1	Q06323	249 aa		32.38	■■■□□ 2.77
ACBD4-209	ENST00000587976	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.38	■■■□□ 2.77
ACBD4-209	ENST00000587976	RAB3GAP2	Q9H2M9	1393 aa		32.37	■■■□□ 2.77
ACBD4-209	ENST00000587976	CABLES1	Q8TDN4	633 aa		32.36	■■■□□ 2.77
ACBD4-209	ENST00000587976	ADGRB2	O60241	1585 aa		32.35	■■■□□ 2.77
ACBD4-209	ENST00000587976	ANKAR	Q7Z5J8	1434 aa		32.34	■■■□□ 2.77
ACBD4-209	ENST00000587976	ABCA3	Q99758	1704 aa		32.34	■■■□□ 2.77
ACBD4-209	ENST00000587976	POGK	Q9P215	609 aa		32.31	■■■□□ 2.76
ACBD4-209	ENST00000587976	NWD2	Q9ULI1	1742 aa		32.31	■■■□□ 2.76
ACBD4-209	ENST00000587976	ARHGEF10	O15013	1369 aa		32.31	■■■□□ 2.76
ACBD4-209	ENST00000587976	PLCH1	Q4KWH8	1693 aa		32.31	■■■□□ 2.76
ACBD4-209	ENST00000587976	BRWD3	Q6RI45	1802 aa		32.3	■■■□□ 2.76
ACBD4-209	ENST00000587976	VPS72	Q15906	364 aa		32.3	■■■□□ 2.76
ACBD4-209	ENST00000587976	ZRANB1	Q9UGI0	708 aa		32.29	■■■□□ 2.76
ACBD4-209	ENST00000587976	HAP1	P54257	671 aa	Predicted RBP	32.28	■■■□□ 2.76
ACBD4-209	ENST00000587976	PMFBP1	Q8TBY8	1022 aa		32.28	■■■□□ 2.76
ACBD4-209	ENST00000587976	ONECUT3	O60422	494 aa	Predicted RBP	32.27	■■■□□ 2.76
ACBD4-209	ENST00000587976	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.26	■■■□□ 2.76
ACBD4-209	ENST00000587976	TRAK1	Q9UPV9	953 aa		32.26	■■■□□ 2.75
ACBD4-209	ENST00000587976	BLM	P54132	1417 aa	Predicted RBP	32.26	■■■□□ 2.75
ACBD4-209	ENST00000587976	LMOD2	Q6P5Q4	547 aa		32.25	■■■□□ 2.75
ACBD4-209	ENST00000587976	SEPT12	Q8IYM1	358 aa		32.25	■■■□□ 2.75
ACBD4-209	ENST00000587976	FAM83G	A6ND36	823 aa		32.24	■■■□□ 2.75
ACBD4-209	ENST00000587976	PLEKHG5	O94827	1062 aa		32.24	■■■□□ 2.75
ACBD4-209	ENST00000587976	PRR36	Q9H6K5	1346 aa		32.24	■■■□□ 2.75
ACBD4-209	ENST00000587976	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.23	■■■□□ 2.75
ACBD4-209	ENST00000587976	ALS2	Q96Q42	1657 aa		32.21	■■■□□ 2.75
ACBD4-209	ENST00000587976	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.2	■■■□□ 2.74
ACBD4-209	ENST00000587976	TULP4	Q9NRJ4	1543 aa		32.2	■■■□□ 2.74
ACBD4-209	ENST00000587976	DCAF11	Q8TEB1	546 aa		32.19	■■■□□ 2.74
ACBD4-209	ENST00000587976	KDM2A	Q9Y2K7	1162 aa		32.19	■■■□□ 2.74
ACBD4-209	ENST00000587976	EIF3A	Q14152	1382 aa	Known RBP	32.18	■■■□□ 2.74
ACBD4-209	ENST00000587976	NRAP	Q86VF7	1730 aa		32.17	■■■□□ 2.74
ACBD4-209	ENST00000587976	WASL	O00401	505 aa	Predicted RBP	32.17	■■■□□ 2.74
ACBD4-209	ENST00000587976	STAC3	Q96MF2	364 aa		32.16	■■■□□ 2.74
ACBD4-209	ENST00000587976	CCDC9	Q9Y3X0	531 aa	Known RBP	32.15	■■■□□ 2.74
ACBD4-209	ENST00000587976	GPRASP1	Q5JY77	1395 aa		32.15	■■■□□ 2.74
ACBD4-209	ENST00000587976	DEFB132	Q7Z7B7	95 aa		32.14	■■■□□ 2.74
ACBD4-209	ENST00000587976	KRT27	Q7Z3Y8	459 aa		32.13	■■■□□ 2.73
ACBD4-209	ENST00000587976	CRYBG1	Q9Y4K1	1723 aa		32.12	■■■□□ 2.73
ACBD4-209	ENST00000587976	HRC	P23327	699 aa		32.11	■■■□□ 2.73
ACBD4-209	ENST00000587976	COL14A1	Q05707	1796 aa	Known RBP	32.11	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms