RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
ERCC1-205ENST00000587888 NUTM2FA1L443 756 aa21.09■□□□□ 0.97
ERCC1-205ENST00000587888 RBM6P78332 1123 aaKnown RBP21.08■□□□□ 0.97
ERCC1-205ENST00000587888 PRAG1Q86YV5 1406 aa21.06■□□□□ 0.96
ERCC1-205ENST00000587888 XPCQ01831 940 aaPredicted RBP21.06■□□□□ 0.96
ERCC1-205ENST00000587888 ANKRD30BQ9BXX2 1392 aa21.06■□□□□ 0.96
ERCC1-205ENST00000587888 SPATA31E1Q6ZUB1 1445 aa21.05■□□□□ 0.96
ERCC1-205ENST00000587888 FOXO3O43524 673 aa21.05■□□□□ 0.96
ERCC1-205ENST00000587888 USP21Q9UK80 565 aa21.05■□□□□ 0.96
ERCC1-205ENST00000587888 CDK12Q9NYV4 1490 aaPredicted RBP21.05■□□□□ 0.96
ERCC1-205ENST00000587888 LAMC1P11047 1609 aa21.04■□□□□ 0.96
ERCC1-205ENST00000587888 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
ERCC1-205ENST00000587888 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
ERCC1-205ENST00000587888 ABCC11Q96J66 1382 aa21■□□□□ 0.95
ERCC1-205ENST00000587888 PLEKHH1Q9ULM0 1364 aa21■□□□□ 0.95
ERCC1-205ENST00000587888 RGS12O14924 1447 aa21■□□□□ 0.95
ERCC1-205ENST00000587888 TRPC5Q9UL62 973 aaPredicted RBP20.99■□□□□ 0.95
ERCC1-205ENST00000587888 CDC42BPGQ6DT37 1551 aa20.98■□□□□ 0.95
ERCC1-205ENST00000587888 FNBP4Q8N3X1 1017 aaPredicted RBP20.98■□□□□ 0.95
ERCC1-205ENST00000587888 IFT172Q9UG01 1749 aa20.98■□□□□ 0.95
ERCC1-205ENST00000587888 TECPR2O15040 1411 aa20.97■□□□□ 0.95
ERCC1-205ENST00000587888 PIK3C2GO75747 1445 aa20.96■□□□□ 0.95
ERCC1-205ENST00000587888 CFAP70Q5T0N1 1121 aa20.96■□□□□ 0.95
ERCC1-205ENST00000587888 C14orf93Q9H972 538 aaKnown RBP20.96■□□□□ 0.95
ERCC1-205ENST00000587888 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.95
ERCC1-205ENST00000587888 PXDNQ92626 1479 aa20.95■□□□□ 0.94
ERCC1-205ENST00000587888 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
ERCC1-205ENST00000587888 COL22A1Q8NFW1 1626 aaPredicted RBP20.93■□□□□ 0.94
ERCC1-205ENST00000587888 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
ERCC1-205ENST00000587888 KRT28Q7Z3Y7 464 aa20.93■□□□□ 0.94
ERCC1-205ENST00000587888 SIRT1Q96EB6 747 aa20.92■□□□□ 0.94
ERCC1-205ENST00000587888 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
ERCC1-205ENST00000587888 PLEKHG5O94827 1062 aa20.91■□□□□ 0.94
ERCC1-205ENST00000587888 MYOM2P54296 1465 aa20.91■□□□□ 0.94
ERCC1-205ENST00000587888 KNDC1Q76NI1 1749 aa20.9■□□□□ 0.94
ERCC1-205ENST00000587888 ATRNO75882 1429 aa20.89■□□□□ 0.94
ERCC1-205ENST00000587888 SPATA31A3Q5VYP0 1347 aa20.89■□□□□ 0.93
ERCC1-205ENST00000587888 PRAM1Q96QH2 718 aa20.89■□□□□ 0.93
ERCC1-205ENST00000587888 FMN2Q9NZ56 1722 aa20.88■□□□□ 0.93
ERCC1-205ENST00000587888 POGKQ9P215 609 aa20.88■□□□□ 0.93
ERCC1-205ENST00000587888 PHF8Q9UPP1 1060 aa20.88■□□□□ 0.93
ERCC1-205ENST00000587888 BCL9LQ86UU0 1499 aa20.88■□□□□ 0.93
ERCC1-205ENST00000587888 ATAD2Q6PL18 1390 aa20.87■□□□□ 0.93
ERCC1-205ENST00000587888 RAB3GAP2Q9H2M9 1393 aa20.87■□□□□ 0.93
ERCC1-205ENST00000587888 KDM2AQ9Y2K7 1162 aa20.87■□□□□ 0.93
ERCC1-205ENST00000587888 HAP1P54257 671 aaPredicted RBP20.86■□□□□ 0.93
ERCC1-205ENST00000587888 PSME1Q06323 249 aa20.86■□□□□ 0.93
ERCC1-205ENST00000587888 GJD4Q96KN9 370 aaPredicted RBP20.86■□□□□ 0.93
ERCC1-205ENST00000587888 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
ERCC1-205ENST00000587888 NRXN1Q9ULB1 1477 aa20.85■□□□□ 0.93
ERCC1-205ENST00000587888 RGPD8O14715 1765 aaPredicted RBP20.85■□□□□ 0.93
ERCC1-205ENST00000587888 MARF1Q9Y4F3 1742 aaKnown RBP20.84■□□□□ 0.93
ERCC1-205ENST00000587888 CABLES1Q8TDN4 633 aa20.84■□□□□ 0.93
ERCC1-205ENST00000587888 UNC5CLQ8IV45 518 aa20.83■□□□□ 0.93
ERCC1-205ENST00000587888 PMFBP1Q8TBY8 1022 aa20.83■□□□□ 0.93
ERCC1-205ENST00000587888 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.93
ERCC1-205ENST00000587888 KIF1AQ12756 1690 aa20.83■□□□□ 0.92
ERCC1-205ENST00000587888 DCAF11Q8TEB1 546 aa20.82■□□□□ 0.92
ERCC1-205ENST00000587888 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
ERCC1-205ENST00000587888 TNS3Q68CZ2 1445 aa20.78■□□□□ 0.92
ERCC1-205ENST00000587888 MINK1Q8N4C8 1332 aaPredicted RBP20.78■□□□□ 0.92
ERCC1-205ENST00000587888 CCDC9Q9Y3X0 531 aaKnown RBP20.76■□□□□ 0.91
ERCC1-205ENST00000587888 SLIT2O94813 1529 aa20.76■□□□□ 0.91
ERCC1-205ENST00000587888 SBNO1A3KN83 1393 aa20.75■□□□□ 0.91
ERCC1-205ENST00000587888 CCDC125Q86Z20 511 aa20.75■□□□□ 0.91
ERCC1-205ENST00000587888 RALGAPBQ86X10 1494 aa20.75■□□□□ 0.91
ERCC1-205ENST00000587888 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
ERCC1-205ENST00000587888 FAM83GA6ND36 823 aa20.73■□□□□ 0.91
ERCC1-205ENST00000587888 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
ERCC1-205ENST00000587888 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
ERCC1-205ENST00000587888 VPS72Q15906 364 aa20.72■□□□□ 0.91
ERCC1-205ENST00000587888 SEPT12Q8IYM1 358 aa20.72■□□□□ 0.91
ERCC1-205ENST00000587888 ZRANB1Q9UGI0 708 aa20.72■□□□□ 0.91
ERCC1-205ENST00000587888 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.72■□□□□ 0.91
ERCC1-205ENST00000587888 ADGRB1O14514 1584 aa20.72■□□□□ 0.91
ERCC1-205ENST00000587888 GLI3P10071 1580 aa20.72■□□□□ 0.91
ERCC1-205ENST00000587888 ANKARQ7Z5J8 1434 aa20.71■□□□□ 0.91
ERCC1-205ENST00000587888 WASLO00401 505 aaPredicted RBP20.7■□□□□ 0.9
ERCC1-205ENST00000587888 PRR36Q9H6K5 1346 aa20.7■□□□□ 0.9
ERCC1-205ENST00000587888 GPRASP1Q5JY77 1395 aa20.69■□□□□ 0.9
ERCC1-205ENST00000587888 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
ERCC1-205ENST00000587888 HRCP23327 699 aa20.68■□□□□ 0.9
ERCC1-205ENST00000587888 NGDNQ8NEJ9 315 aaKnown RBP20.68■□□□□ 0.9
ERCC1-205ENST00000587888 STAC3Q96MF2 364 aa20.68■□□□□ 0.9
ERCC1-205ENST00000587888 A0A0G2JS52 829 aa20.66■□□□□ 0.9
ERCC1-205ENST00000587888 MYT1Q01538 1121 aa20.66■□□□□ 0.9
ERCC1-205ENST00000587888 BTG4Q9NY30 223 aa20.66■□□□□ 0.9
ERCC1-205ENST00000587888 ADGRB2O60241 1585 aa20.66■□□□□ 0.9
ERCC1-205ENST00000587888 PLCH1Q4KWH8 1693 aa20.65■□□□□ 0.9
ERCC1-205ENST00000587888 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
ERCC1-205ENST00000587888 ONECUT3O60422 494 aaPredicted RBP20.65■□□□□ 0.9
ERCC1-205ENST00000587888 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.9
ERCC1-205ENST00000587888 SF3B2Q13435 895 aaKnown RBP20.64■□□□□ 0.89
ERCC1-205ENST00000587888 KRT27Q7Z3Y8 459 aa20.64■□□□□ 0.89
ERCC1-205ENST00000587888 DEFB132Q7Z7B7 95 aa20.64■□□□□ 0.89
ERCC1-205ENST00000587888 NUDT16Q96DE0 195 aaKnown RBP20.63■□□□□ 0.89
ERCC1-205ENST00000587888 ABCA3Q99758 1704 aa20.63■□□□□ 0.89
ERCC1-205ENST00000587888 TULP4Q9NRJ4 1543 aa20.63■□□□□ 0.89
ERCC1-205ENST00000587888 BLMP54132 1417 aaPredicted RBP20.62■□□□□ 0.89
ERCC1-205ENST00000587888 NWD2Q9ULI1 1742 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms