RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TECPR2O15040 1411 aa22.34■■□□□ 1.17
VAPA-209ENST00000585042 C8orf37Q96NL8 207 aa22.34■■□□□ 1.17
VAPA-209ENST00000585042 ABCC11Q96J66 1382 aa22.34■■□□□ 1.17
VAPA-209ENST00000585042 RBM6P78332 1123 aaKnown RBP22.33■■□□□ 1.17
VAPA-209ENST00000585042 LRPPRCP42704 1394 aaKnown RBP22.33■■□□□ 1.17
VAPA-209ENST00000585042 NGLY1Q96IV0 654 aa22.32■■□□□ 1.16
VAPA-209ENST00000585042 NPHP3Q7Z494 1330 aa22.31■■□□□ 1.16
VAPA-209ENST00000585042 CDC42BPGQ6DT37 1551 aa22.31■■□□□ 1.16
VAPA-209ENST00000585042 ESCO1Q5FWF5 840 aa22.31■■□□□ 1.16
VAPA-209ENST00000585042 SIRT1Q96EB6 747 aa22.31■■□□□ 1.16
VAPA-209ENST00000585042 IFT172Q9UG01 1749 aa22.29■■□□□ 1.16
VAPA-209ENST00000585042 ADAMTS2O95450 1211 aa22.28■■□□□ 1.16
VAPA-209ENST00000585042 STK26Q9P289 416 aa22.28■■□□□ 1.16
VAPA-209ENST00000585042 PIK3C2GO75747 1445 aa22.28■■□□□ 1.16
VAPA-209ENST00000585042 WAPLQ7Z5K2 1190 aa22.27■■□□□ 1.16
VAPA-209ENST00000585042 FNBP4Q8N3X1 1017 aaPredicted RBP22.27■■□□□ 1.16
VAPA-209ENST00000585042 C14orf93Q9H972 538 aaKnown RBP22.26■■□□□ 1.15
VAPA-209ENST00000585042 COL22A1Q8NFW1 1626 aaPredicted RBP22.25■■□□□ 1.15
VAPA-209ENST00000585042 TMEM132EQ6IEE7 984 aa22.25■■□□□ 1.15
VAPA-209ENST00000585042 KNDC1Q76NI1 1749 aa22.24■■□□□ 1.15
VAPA-209ENST00000585042 FOXO3O43524 673 aa22.24■■□□□ 1.15
VAPA-209ENST00000585042 USP21Q9UK80 565 aa22.24■■□□□ 1.15
VAPA-209ENST00000585042 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
VAPA-209ENST00000585042 TRPC5Q9UL62 973 aaPredicted RBP22.23■■□□□ 1.15
VAPA-209ENST00000585042 PXDNQ92626 1479 aa22.22■■□□□ 1.15
VAPA-209ENST00000585042 DHX57Q6P158 1386 aaKnown RBP22.21■■□□□ 1.15
VAPA-209ENST00000585042 RGS12O14924 1447 aa22.2■■□□□ 1.14
VAPA-209ENST00000585042 MYOM2P54296 1465 aa22.2■■□□□ 1.14
VAPA-209ENST00000585042 NRXN1Q9ULB1 1477 aa22.2■■□□□ 1.14
VAPA-209ENST00000585042 PLEKHH1Q9ULM0 1364 aa22.18■■□□□ 1.14
VAPA-209ENST00000585042 NUTM2FA1L443 756 aa22.16■■□□□ 1.14
VAPA-209ENST00000585042 ATRNO75882 1429 aa22.15■■□□□ 1.14
VAPA-209ENST00000585042 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
VAPA-209ENST00000585042 SPATA31A3Q5VYP0 1347 aa22.15■■□□□ 1.14
VAPA-209ENST00000585042 CFAP70Q5T0N1 1121 aa22.15■■□□□ 1.14
VAPA-209ENST00000585042 STAC3Q96MF2 364 aa22.15■■□□□ 1.14
VAPA-209ENST00000585042 XPCQ01831 940 aaPredicted RBP22.14■■□□□ 1.13
VAPA-209ENST00000585042 KIF1AQ12756 1690 aa22.14■■□□□ 1.13
VAPA-209ENST00000585042 RAB3GAP2Q9H2M9 1393 aa22.13■■□□□ 1.13
VAPA-209ENST00000585042 PSME1Q06323 249 aa22.13■■□□□ 1.13
VAPA-209ENST00000585042 KRT28Q7Z3Y7 464 aa22.13■■□□□ 1.13
VAPA-209ENST00000585042 ATAD2Q6PL18 1390 aa22.12■■□□□ 1.13
VAPA-209ENST00000585042 BCL9LQ86UU0 1499 aa22.12■■□□□ 1.13
VAPA-209ENST00000585042 HRCP23327 699 aa22.12■■□□□ 1.13
VAPA-209ENST00000585042 MARF1Q9Y4F3 1742 aaKnown RBP22.11■■□□□ 1.13
VAPA-209ENST00000585042 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
VAPA-209ENST00000585042 PRAM1Q96QH2 718 aa22.09■■□□□ 1.13
VAPA-209ENST00000585042 DLC1Q96QB1 1528 aa22.09■■□□□ 1.13
VAPA-209ENST00000585042 GJD4Q96KN9 370 aaPredicted RBP22.08■■□□□ 1.13
VAPA-209ENST00000585042 CCDC125Q86Z20 511 aa22.07■■□□□ 1.12
VAPA-209ENST00000585042 UNC5CLQ8IV45 518 aa22.07■■□□□ 1.12
VAPA-209ENST00000585042 POGKQ9P215 609 aa22.07■■□□□ 1.12
VAPA-209ENST00000585042 SBNO1A3KN83 1393 aa22.06■■□□□ 1.12
VAPA-209ENST00000585042 ANKARQ7Z5J8 1434 aa22.05■■□□□ 1.12
VAPA-209ENST00000585042 SLIT2O94813 1529 aa22.04■■□□□ 1.12
VAPA-209ENST00000585042 TNS3Q68CZ2 1445 aa22.04■■□□□ 1.12
VAPA-209ENST00000585042 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.03■■□□□ 1.12
VAPA-209ENST00000585042 RGPD8O14715 1765 aaPredicted RBP22.03■■□□□ 1.12
VAPA-209ENST00000585042 ARHGEF10O15013 1369 aa22.02■■□□□ 1.12
VAPA-209ENST00000585042 SAFB2Q14151 953 aaKnown RBP eCLIP22.02■■□□□ 1.12
VAPA-209ENST00000585042 ADGRB1O14514 1584 aa22.01■■□□□ 1.11
VAPA-209ENST00000585042 DCAF11Q8TEB1 546 aa22.01■■□□□ 1.11
VAPA-209ENST00000585042 EIF3AQ14152 1382 aaKnown RBP22■■□□□ 1.11
VAPA-209ENST00000585042 HAP1P54257 671 aaPredicted RBP22■■□□□ 1.11
VAPA-209ENST00000585042 ADGRB2O60241 1585 aa21.99■■□□□ 1.11
VAPA-209ENST00000585042 TRAK1Q9UPV9 953 aa21.99■■□□□ 1.11
VAPA-209ENST00000585042 KDM2AQ9Y2K7 1162 aa21.99■■□□□ 1.11
VAPA-209ENST00000585042 USP32Q8NFA0 1604 aa21.98■■□□□ 1.11
VAPA-209ENST00000585042 VPS72Q15906 364 aa21.96■■□□□ 1.11
VAPA-209ENST00000585042 PMFBP1Q8TBY8 1022 aa21.96■■□□□ 1.11
VAPA-209ENST00000585042 RALGAPBQ86X10 1494 aa21.96■■□□□ 1.11
VAPA-209ENST00000585042 WASLO00401 505 aaPredicted RBP21.95■■□□□ 1.1
VAPA-209ENST00000585042 ONECUT3O60422 494 aaPredicted RBP21.95■■□□□ 1.1
VAPA-209ENST00000585042 LMOD2Q6P5Q4 547 aa21.95■■□□□ 1.1
VAPA-209ENST00000585042 CABLES1Q8TDN4 633 aa21.95■■□□□ 1.1
VAPA-209ENST00000585042 GPRASP1Q5JY77 1395 aa21.95■■□□□ 1.1
VAPA-209ENST00000585042 GLI3P10071 1580 aa21.93■■□□□ 1.1
VAPA-209ENST00000585042 NWD2Q9ULI1 1742 aa21.92■■□□□ 1.1
VAPA-209ENST00000585042 MINK1Q8N4C8 1332 aaPredicted RBP21.92■■□□□ 1.1
VAPA-209ENST00000585042 HIRIP3Q9BW71 556 aaPredicted RBP21.92■■□□□ 1.1
VAPA-209ENST00000585042 FAM83GA6ND36 823 aa21.91■■□□□ 1.1
VAPA-209ENST00000585042 ZRANB1Q9UGI0 708 aa21.91■■□□□ 1.1
VAPA-209ENST00000585042 EP400Q96L91 3159 aa21.91■■□□□ 1.1
VAPA-209ENST00000585042 TULP4Q9NRJ4 1543 aa21.9■■□□□ 1.1
VAPA-209ENST00000585042 PRR36Q9H6K5 1346 aa21.89■■□□□ 1.1
VAPA-209ENST00000585042 SEPT12Q8IYM1 358 aa21.89■■□□□ 1.09
VAPA-209ENST00000585042 BLMP54132 1417 aaPredicted RBP21.88■■□□□ 1.09
VAPA-209ENST00000585042 ABCA3Q99758 1704 aa21.87■■□□□ 1.09
VAPA-209ENST00000585042 TRPM3Q9HCF6 1732 aaPredicted RBP21.87■■□□□ 1.09
VAPA-209ENST00000585042 NGDNQ8NEJ9 315 aaKnown RBP21.87■■□□□ 1.09
VAPA-209ENST00000585042 PLCH1Q4KWH8 1693 aa21.86■■□□□ 1.09
VAPA-209ENST00000585042 CCDC9Q9Y3X0 531 aaKnown RBP21.86■■□□□ 1.09
VAPA-209ENST00000585042 ALS2Q96Q42 1657 aa21.85■■□□□ 1.09
VAPA-209ENST00000585042 NUDT16Q96DE0 195 aaKnown RBP21.84■■□□□ 1.09
VAPA-209ENST00000585042 PLEKHG5O94827 1062 aa21.83■■□□□ 1.09
VAPA-209ENST00000585042 KRT27Q7Z3Y8 459 aa21.83■■□□□ 1.09
VAPA-209ENST00000585042 SF3B2Q13435 895 aaKnown RBP21.82■■□□□ 1.08
VAPA-209ENST00000585042 BTG4Q9NY30 223 aa21.82■■□□□ 1.08
VAPA-209ENST00000585042 BRWD3Q6RI45 1802 aa21.82■■□□□ 1.08
VAPA-209ENST00000585042 ARHGEF28Q8N1W1 1705 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 581 ms