RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
CRLF3-205ENST00000583805 ASXL1Q8IXJ9 1541 aa13.05□□□□□ -0.32
CRLF3-205ENST00000583805 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
CRLF3-205ENST00000583805 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
CRLF3-205ENST00000583805 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
CRLF3-205ENST00000583805 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
CRLF3-205ENST00000583805 RPGRIP1LQ68CZ1 1315 aa13.03□□□□□ -0.32
CRLF3-205ENST00000583805 ACIN1Q9UKV3 1341 aaKnown RBP13.03□□□□□ -0.32
CRLF3-205ENST00000583805 CAPN15O75808 1086 aa13.02□□□□□ -0.33
CRLF3-205ENST00000583805 TRIM52Q96A61 297 aa13.02□□□□□ -0.33
CRLF3-205ENST00000583805 METP08581 1390 aa13.02□□□□□ -0.33
CRLF3-205ENST00000583805 MST1RQ04912 1400 aa13.02□□□□□ -0.33
CRLF3-205ENST00000583805 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
CRLF3-205ENST00000583805 RGS17Q9UGC6 210 aaPredicted RBP13.01□□□□□ -0.33
CRLF3-205ENST00000583805 MARF1Q9Y4F3 1742 aaKnown RBP13□□□□□ -0.33
CRLF3-205ENST00000583805 LRP6O75581 1613 aa12.99□□□□□ -0.33
CRLF3-205ENST00000583805 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
CRLF3-205ENST00000583805 CCDC144AA2RUR9 1427 aa12.99□□□□□ -0.33
CRLF3-205ENST00000583805 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
CRLF3-205ENST00000583805 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
CRLF3-205ENST00000583805 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
CRLF3-205ENST00000583805 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
CRLF3-205ENST00000583805 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
CRLF3-205ENST00000583805 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
CRLF3-205ENST00000583805 KIF1AQ12756 1690 aa12.95□□□□□ -0.34
CRLF3-205ENST00000583805 SPATA31E1Q6ZUB1 1445 aa12.95□□□□□ -0.34
CRLF3-205ENST00000583805 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
CRLF3-205ENST00000583805 FMN2Q9NZ56 1722 aa12.94□□□□□ -0.34
CRLF3-205ENST00000583805 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
CRLF3-205ENST00000583805 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
CRLF3-205ENST00000583805 ZNF772Q68DY9 489 aaPredicted RBP12.94□□□□□ -0.34
CRLF3-205ENST00000583805 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
CRLF3-205ENST00000583805 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
CRLF3-205ENST00000583805 RGPD8O14715 1765 aaPredicted RBP12.93□□□□□ -0.34
CRLF3-205ENST00000583805 TECPR2O15040 1411 aa12.93□□□□□ -0.34
CRLF3-205ENST00000583805 LRRC59Q96AG4 307 aaKnown RBP12.92□□□□□ -0.34
CRLF3-205ENST00000583805 ROBO2Q9HCK4 1378 aa12.92□□□□□ -0.34
CRLF3-205ENST00000583805 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
CRLF3-205ENST00000583805 PIK3C2GO75747 1445 aa12.91□□□□□ -0.34
CRLF3-205ENST00000583805 MYOM2P54296 1465 aa12.91□□□□□ -0.34
CRLF3-205ENST00000583805 MPHOSPH9Q99550 1183 aa12.89□□□□□ -0.35
CRLF3-205ENST00000583805 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
CRLF3-205ENST00000583805 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.88□□□□□ -0.35
CRLF3-205ENST00000583805 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
CRLF3-205ENST00000583805 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
CRLF3-205ENST00000583805 LRPPRCP42704 1394 aaKnown RBP12.87□□□□□ -0.35
CRLF3-205ENST00000583805 SOS2Q07890 1332 aaPredicted RBP12.87□□□□□ -0.35
CRLF3-205ENST00000583805 ADGRF5Q8IZF2 1346 aa12.86□□□□□ -0.35
CRLF3-205ENST00000583805 ABCC11Q96J66 1382 aa12.85□□□□□ -0.35
CRLF3-205ENST00000583805 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
CRLF3-205ENST00000583805 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
CRLF3-205ENST00000583805 YTHDC2Q9H6S0 1430 aaKnown RBP12.85□□□□□ -0.35
CRLF3-205ENST00000583805 NPHP3Q7Z494 1330 aa12.85□□□□□ -0.35
CRLF3-205ENST00000583805 PXDNQ92626 1479 aa12.85□□□□□ -0.35
CRLF3-205ENST00000583805 DLC1Q96QB1 1528 aa12.84□□□□□ -0.35
CRLF3-205ENST00000583805 NUTM2BA6NNL0 878 aaPredicted RBP12.84□□□□□ -0.35
CRLF3-205ENST00000583805 NUTM2EB1AL46 878 aaPredicted RBP12.84□□□□□ -0.35
CRLF3-205ENST00000583805 NUTM2AQ8IVF1 878 aaPredicted RBP12.84□□□□□ -0.35
CRLF3-205ENST00000583805 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
CRLF3-205ENST00000583805 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
CRLF3-205ENST00000583805 ITSN1Q15811 1721 aa12.84□□□□□ -0.35
CRLF3-205ENST00000583805 ABCA3Q99758 1704 aa12.84□□□□□ -0.35
CRLF3-205ENST00000583805 AFF2P51816 1311 aa12.84□□□□□ -0.35
CRLF3-205ENST00000583805 RXRBP28702 533 aa12.83□□□□□ -0.36
CRLF3-205ENST00000583805 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
CRLF3-205ENST00000583805 RGL3Q3MIN7 710 aa12.83□□□□□ -0.36
CRLF3-205ENST00000583805 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
CRLF3-205ENST00000583805 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
CRLF3-205ENST00000583805 RAB3GAP2Q9H2M9 1393 aa12.82□□□□□ -0.36
CRLF3-205ENST00000583805 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
CRLF3-205ENST00000583805 DDX17Q92841 729 aaKnown RBP12.81□□□□□ -0.36
CRLF3-205ENST00000583805 SIRT1Q96EB6 747 aa12.81□□□□□ -0.36
CRLF3-205ENST00000583805 ORAI2Q96SN7 254 aa12.81□□□□□ -0.36
CRLF3-205ENST00000583805 ARHGEF28Q8N1W1 1705 aaKnown RBP12.81□□□□□ -0.36
CRLF3-205ENST00000583805 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
CRLF3-205ENST00000583805 KIAA1210Q9ULL0 1709 aa12.8□□□□□ -0.36
CRLF3-205ENST00000583805 C8orf37Q96NL8 207 aa12.8□□□□□ -0.36
CRLF3-205ENST00000583805 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
CRLF3-205ENST00000583805 ESCO1Q5FWF5 840 aa12.79□□□□□ -0.36
CRLF3-205ENST00000583805 PLCH1Q4KWH8 1693 aa12.79□□□□□ -0.36
CRLF3-205ENST00000583805 ADGRB1O14514 1584 aa12.78□□□□□ -0.36
CRLF3-205ENST00000583805 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
CRLF3-205ENST00000583805 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
CRLF3-205ENST00000583805 SPRYD3Q8NCJ5 442 aa12.78□□□□□ -0.36
CRLF3-205ENST00000583805 C14orf93Q9H972 538 aaKnown RBP12.78□□□□□ -0.36
CRLF3-205ENST00000583805 STK26Q9P289 416 aa12.78□□□□□ -0.36
CRLF3-205ENST00000583805 RGS12O14924 1447 aa12.78□□□□□ -0.36
CRLF3-205ENST00000583805 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
CRLF3-205ENST00000583805 ABCB7O75027 752 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 MIER1Q8N108 512 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 ANKARQ7Z5J8 1434 aa12.76□□□□□ -0.37
CRLF3-205ENST00000583805 ATRNO75882 1429 aa12.75□□□□□ -0.37
CRLF3-205ENST00000583805 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
CRLF3-205ENST00000583805 HRCP23327 699 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms