RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 TECPR2O15040 1411 aa8.46□□□□□ -1.05
RNU4ATAC-201ENST00000580972 SETD1AO15047 1707 aaKnown RBP8.46□□□□□ -1.05
RNU4ATAC-201ENST00000580972 DLC1Q96QB1 1528 aa8.46□□□□□ -1.05
RNU4ATAC-201ENST00000580972 NUTM2FA1L443 756 aa8.46□□□□□ -1.06
RNU4ATAC-201ENST00000580972 PRR36Q9H6K5 1346 aa8.46□□□□□ -1.06
RNU4ATAC-201ENST00000580972 CDCA8Q53HL2 280 aa8.45□□□□□ -1.06
RNU4ATAC-201ENST00000580972 FAM135BQ49AJ0 1406 aa8.45□□□□□ -1.06
RNU4ATAC-201ENST00000580972 KDM5AP29375 1690 aaKnown RBP8.44□□□□□ -1.06
RNU4ATAC-201ENST00000580972 ARHGEF28Q8N1W1 1705 aaKnown RBP8.44□□□□□ -1.06
RNU4ATAC-201ENST00000580972 WASLO00401 505 aaPredicted RBP8.44□□□□□ -1.06
RNU4ATAC-201ENST00000580972 AMER1Q5JTC6 1135 aaPredicted RBP8.44□□□□□ -1.06
RNU4ATAC-201ENST00000580972 NSD3Q9BZ95 1437 aa8.44□□□□□ -1.06
RNU4ATAC-201ENST00000580972 LMTK3Q96Q04 1460 aa8.44□□□□□ -1.06
RNU4ATAC-201ENST00000580972 CPS1P31327 1500 aa8.44□□□□□ -1.06
RNU4ATAC-201ENST00000580972 ZNF142P52746 1687 aaPredicted RBP8.43□□□□□ -1.06
RNU4ATAC-201ENST00000580972 SIRT1Q96EB6 747 aa8.43□□□□□ -1.06
RNU4ATAC-201ENST00000580972 CABP1Q9NZU7 370 aa8.43□□□□□ -1.06
RNU4ATAC-201ENST00000580972 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
RNU4ATAC-201ENST00000580972 CCER2I3L3R5 266 aa8.42□□□□□ -1.06
RNU4ATAC-201ENST00000580972 NUDT16Q96DE0 195 aaKnown RBP8.42□□□□□ -1.06
RNU4ATAC-201ENST00000580972 KNSTRNQ9Y448 316 aa8.42□□□□□ -1.06
RNU4ATAC-201ENST00000580972 A0A1W2PP64 1363 aa8.42□□□□□ -1.06
RNU4ATAC-201ENST00000580972 KTN1Q86UP2 1357 aaKnown RBP8.42□□□□□ -1.06
RNU4ATAC-201ENST00000580972 PTCH1Q13635 1447 aa8.42□□□□□ -1.06
RNU4ATAC-201ENST00000580972 CD163L1Q9NR16 1453 aa8.41□□□□□ -1.06
RNU4ATAC-201ENST00000580972 PARD3Q8TEW0 1356 aa8.41□□□□□ -1.06
RNU4ATAC-201ENST00000580972 SENP3-EIF4A1A0A087X0R7 540 aa8.41□□□□□ -1.06
RNU4ATAC-201ENST00000580972 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
RNU4ATAC-201ENST00000580972 DIP2AQ14689 1571 aa8.4□□□□□ -1.06
RNU4ATAC-201ENST00000580972 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
RNU4ATAC-201ENST00000580972 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.06
RNU4ATAC-201ENST00000580972 MYOM1P52179 1685 aa8.4□□□□□ -1.07
RNU4ATAC-201ENST00000580972 PIK3R4Q99570 1358 aa8.39□□□□□ -1.07
RNU4ATAC-201ENST00000580972 SLC24A1O60721 1099 aa8.39□□□□□ -1.07
RNU4ATAC-201ENST00000580972 TNNT2P45379 298 aaPredicted RBP8.39□□□□□ -1.07
RNU4ATAC-201ENST00000580972 PUS7Q96PZ0 661 aaKnown RBP8.39□□□□□ -1.07
RNU4ATAC-201ENST00000580972 ZRANB1Q9UGI0 708 aa8.39□□□□□ -1.07
RNU4ATAC-201ENST00000580972 ATP7BP35670 1465 aa8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 PPIP5K1Q6PFW1 1433 aa8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 XRN1Q8IZH2 1706 aaKnown RBP8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 MYBBP1AQ9BQG0 1328 aaKnown RBP8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 PPP2R1AP30153 589 aa8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 RALBP1Q15311 655 aa8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 PROSER2Q86WR7 435 aaPredicted RBP8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 GGNBP2Q9H3C7 697 aa8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 NKTRP30414 1462 aaKnown RBP8.38□□□□□ -1.07
RNU4ATAC-201ENST00000580972 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.37□□□□□ -1.07
RNU4ATAC-201ENST00000580972 ZNF335Q9H4Z2 1342 aaPredicted RBP8.37□□□□□ -1.07
RNU4ATAC-201ENST00000580972 FBLN1P23142 703 aa8.37□□□□□ -1.07
RNU4ATAC-201ENST00000580972 FAM9BQ8IZU0 186 aa8.37□□□□□ -1.07
RNU4ATAC-201ENST00000580972 PMFBP1Q8TBY8 1022 aa8.37□□□□□ -1.07
RNU4ATAC-201ENST00000580972 HDGFL2Q7Z4V5 671 aaPredicted RBP8.36□□□□□ -1.07
RNU4ATAC-201ENST00000580972 C14orf37Q86TY3 774 aa8.36□□□□□ -1.07
RNU4ATAC-201ENST00000580972 NME9Q86XW9 330 aa8.36□□□□□ -1.07
RNU4ATAC-201ENST00000580972 CCDC61Q9Y6R9 512 aa8.36□□□□□ -1.07
RNU4ATAC-201ENST00000580972 TMEM94Q12767 1356 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 ACEP12821 1306 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 KNDC1Q76NI1 1749 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 FYB1O15117 783 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 MORC1Q86VD1 984 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 NLRP13Q86W25 1043 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 TERF2IPQ9NYB0 399 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 CPSF1Q10570 1443 aaKnown RBP8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 ADGRL3Q9HAR2 1447 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 ADGRB2O60241 1585 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 NPC1L1Q9UHC9 1359 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
RNU4ATAC-201ENST00000580972 POLR1AO95602 1720 aaPredicted RBP8.34□□□□□ -1.07
RNU4ATAC-201ENST00000580972 CGNL1Q0VF96 1302 aa8.34□□□□□ -1.07
RNU4ATAC-201ENST00000580972 PNISRQ8TF01 805 aaKnown RBP8.34□□□□□ -1.07
RNU4ATAC-201ENST00000580972 BRD4O60885 1362 aaPredicted RBP8.34□□□□□ -1.07
RNU4ATAC-201ENST00000580972 PLEKHG3A1L390 1219 aa8.33□□□□□ -1.08
RNU4ATAC-201ENST00000580972 NWD1Q149M9 1564 aa8.33□□□□□ -1.08
RNU4ATAC-201ENST00000580972 ORAI2Q96SN7 254 aa8.33□□□□□ -1.08
RNU4ATAC-201ENST00000580972 TTC21BQ7Z4L5 1316 aa8.32□□□□□ -1.08
RNU4ATAC-201ENST00000580972 XPCQ01831 940 aaPredicted RBP8.32□□□□□ -1.08
RNU4ATAC-201ENST00000580972 NGDNQ8NEJ9 315 aaKnown RBP8.32□□□□□ -1.08
RNU4ATAC-201ENST00000580972 DDX17Q92841 729 aaKnown RBP8.32□□□□□ -1.08
RNU4ATAC-201ENST00000580972 CDC42BPGQ6DT37 1551 aa8.31□□□□□ -1.08
RNU4ATAC-201ENST00000580972 EDC4Q6P2E9 1401 aaKnown RBP8.31□□□□□ -1.08
RNU4ATAC-201ENST00000580972 ANKARQ7Z5J8 1434 aa8.31□□□□□ -1.08
RNU4ATAC-201ENST00000580972 HNRNPUQ00839 825 aaKnown RBP eCLIP8.31□□□□□ -1.08
RNU4ATAC-201ENST00000580972 ESCO1Q5FWF5 840 aa8.31□□□□□ -1.08
RNU4ATAC-201ENST00000580972 NUTM2GQ5VZR2 741 aa8.31□□□□□ -1.08
RNU4ATAC-201ENST00000580972 PHF8Q9UPP1 1060 aa8.31□□□□□ -1.08
RNU4ATAC-201ENST00000580972 USP32Q8NFA0 1604 aa8.31□□□□□ -1.08
RNU4ATAC-201ENST00000580972 USP6P35125 1406 aa8.3□□□□□ -1.08
RNU4ATAC-201ENST00000580972 SSH2Q76I76 1423 aa8.3□□□□□ -1.08
RNU4ATAC-201ENST00000580972 SOX12O15370 315 aa8.3□□□□□ -1.08
RNU4ATAC-201ENST00000580972 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
RNU4ATAC-201ENST00000580972 MTHFSP49914 203 aa8.3□□□□□ -1.08
RNU4ATAC-201ENST00000580972 POLR3AO14802 1390 aaPredicted RBP8.3□□□□□ -1.08
RNU4ATAC-201ENST00000580972 C19orf44Q9H6X5 657 aa8.29□□□□□ -1.08
RNU4ATAC-201ENST00000580972 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
RNU4ATAC-201ENST00000580972 NSD2O96028 1365 aa8.29□□□□□ -1.08
RNU4ATAC-201ENST00000580972 C1orf167Q5SNV9 1468 aa8.29□□□□□ -1.08
RNU4ATAC-201ENST00000580972 LRRC7Q96NW7 1537 aa8.29□□□□□ -1.08
RNU4ATAC-201ENST00000580972 RRS1Q15050 365 aaKnown RBP8.28□□□□□ -1.08
RNU4ATAC-201ENST00000580972 ADAMTS8Q9UP79 889 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms