RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 ADAMTS2O95450 1211 aa16.45■□□□□ 0.22
PPP4R1-218ENST00000580745 XPCQ01831 940 aaPredicted RBP16.45■□□□□ 0.22
PPP4R1-218ENST00000580745 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
PPP4R1-218ENST00000580745 AFF2P51816 1311 aa16.45■□□□□ 0.22
PPP4R1-218ENST00000580745 SOS2Q07890 1332 aaPredicted RBP16.45■□□□□ 0.22
PPP4R1-218ENST00000580745 ABCC11Q96J66 1382 aa16.44■□□□□ 0.22
PPP4R1-218ENST00000580745 C14orf93Q9H972 538 aaKnown RBP16.44■□□□□ 0.22
PPP4R1-218ENST00000580745 SHPRHQ149N8 1683 aa16.43■□□□□ 0.22
PPP4R1-218ENST00000580745 NHSL1Q5SYE7 1610 aa16.43■□□□□ 0.22
PPP4R1-218ENST00000580745 TECPR2O15040 1411 aa16.43■□□□□ 0.22
PPP4R1-218ENST00000580745 YTHDC2Q9H6S0 1430 aaKnown RBP16.43■□□□□ 0.22
PPP4R1-218ENST00000580745 FOXO3O43524 673 aa16.42■□□□□ 0.22
PPP4R1-218ENST00000580745 SAFB2Q14151 953 aaKnown RBP eCLIP16.41■□□□□ 0.22
PPP4R1-218ENST00000580745 ACIN1Q9UKV3 1341 aaKnown RBP16.41■□□□□ 0.22
PPP4R1-218ENST00000580745 RXRBP28702 533 aa16.4■□□□□ 0.22
PPP4R1-218ENST00000580745 KDM2AQ9Y2K7 1162 aa16.4■□□□□ 0.22
PPP4R1-218ENST00000580745 NRXN1Q9ULB1 1477 aa16.39■□□□□ 0.21
PPP4R1-218ENST00000580745 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
PPP4R1-218ENST00000580745 PRAM1Q96QH2 718 aa16.38■□□□□ 0.21
PPP4R1-218ENST00000580745 CDC42BPGQ6DT37 1551 aa16.38■□□□□ 0.21
PPP4R1-218ENST00000580745 QTRT2Q9H974 415 aaKnown RBP16.37■□□□□ 0.21
PPP4R1-218ENST00000580745 NPHP3Q7Z494 1330 aa16.37■□□□□ 0.21
PPP4R1-218ENST00000580745 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
PPP4R1-218ENST00000580745 MYOM2P54296 1465 aa16.36■□□□□ 0.21
PPP4R1-218ENST00000580745 DCAF11Q8TEB1 546 aa16.36■□□□□ 0.21
PPP4R1-218ENST00000580745 SIRT1Q96EB6 747 aa16.36■□□□□ 0.21
PPP4R1-218ENST00000580745 DHX57Q6P158 1386 aaKnown RBP16.36■□□□□ 0.21
PPP4R1-218ENST00000580745 PXDNQ92626 1479 aa16.35■□□□□ 0.21
PPP4R1-218ENST00000580745 TRAK1Q9UPV9 953 aa16.34■□□□□ 0.21
PPP4R1-218ENST00000580745 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.2
PPP4R1-218ENST00000580745 POGKQ9P215 609 aa16.33■□□□□ 0.2
PPP4R1-218ENST00000580745 LAMC1P11047 1609 aa16.33■□□□□ 0.2
PPP4R1-218ENST00000580745 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
PPP4R1-218ENST00000580745 HRCP23327 699 aa16.32■□□□□ 0.2
PPP4R1-218ENST00000580745 HIRIP3Q9BW71 556 aaPredicted RBP16.32■□□□□ 0.2
PPP4R1-218ENST00000580745 USP21Q9UK80 565 aa16.32■□□□□ 0.2
PPP4R1-218ENST00000580745 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
PPP4R1-218ENST00000580745 KRT28Q7Z3Y7 464 aa16.31■□□□□ 0.2
PPP4R1-218ENST00000580745 PHF8Q9UPP1 1060 aa16.31■□□□□ 0.2
PPP4R1-218ENST00000580745 RGS12O14924 1447 aa16.3■□□□□ 0.2
PPP4R1-218ENST00000580745 SPATA31A3Q5VYP0 1347 aa16.29■□□□□ 0.2
PPP4R1-218ENST00000580745 MINK1Q8N4C8 1332 aaPredicted RBP16.29■□□□□ 0.2
PPP4R1-218ENST00000580745 FNBP4Q8N3X1 1017 aaPredicted RBP16.29■□□□□ 0.2
PPP4R1-218ENST00000580745 PMFBP1Q8TBY8 1022 aa16.29■□□□□ 0.2
PPP4R1-218ENST00000580745 ADGRB1O14514 1584 aa16.29■□□□□ 0.2
PPP4R1-218ENST00000580745 KNDC1Q76NI1 1749 aa16.28■□□□□ 0.2
PPP4R1-218ENST00000580745 CABLES1Q8TDN4 633 aa16.27■□□□□ 0.2
PPP4R1-218ENST00000580745 TRPC5Q9UL62 973 aaPredicted RBP16.26■□□□□ 0.19
PPP4R1-218ENST00000580745 CDK12Q9NYV4 1490 aaPredicted RBP16.26■□□□□ 0.19
PPP4R1-218ENST00000580745 PRR36Q9H6K5 1346 aa16.25■□□□□ 0.19
PPP4R1-218ENST00000580745 LMOD2Q6P5Q4 547 aa16.25■□□□□ 0.19
PPP4R1-218ENST00000580745 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
PPP4R1-218ENST00000580745 DLC1Q96QB1 1528 aa16.24■□□□□ 0.19
PPP4R1-218ENST00000580745 BCL9LQ86UU0 1499 aa16.24■□□□□ 0.19
PPP4R1-218ENST00000580745 COL22A1Q8NFW1 1626 aaPredicted RBP16.23■□□□□ 0.19
PPP4R1-218ENST00000580745 ATRNO75882 1429 aa16.23■□□□□ 0.19
PPP4R1-218ENST00000580745 PSME1Q06323 249 aa16.23■□□□□ 0.19
PPP4R1-218ENST00000580745 WASLO00401 505 aaPredicted RBP16.22■□□□□ 0.19
PPP4R1-218ENST00000580745 TNS3Q68CZ2 1445 aa16.21■□□□□ 0.19
PPP4R1-218ENST00000580745 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
PPP4R1-218ENST00000580745 NBPF1Q3BBV0 1214 aa16.2■□□□□ 0.18
PPP4R1-218ENST00000580745 STAC3Q96MF2 364 aa16.2■□□□□ 0.18
PPP4R1-218ENST00000580745 ANKARQ7Z5J8 1434 aa16.19■□□□□ 0.18
PPP4R1-218ENST00000580745 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
PPP4R1-218ENST00000580745 UNC5CLQ8IV45 518 aa16.18■□□□□ 0.18
PPP4R1-218ENST00000580745 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
PPP4R1-218ENST00000580745 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
PPP4R1-218ENST00000580745 USP32Q8NFA0 1604 aa16.17■□□□□ 0.18
PPP4R1-218ENST00000580745 SLIT2O94813 1529 aa16.16■□□□□ 0.18
PPP4R1-218ENST00000580745 NGDNQ8NEJ9 315 aaKnown RBP16.16■□□□□ 0.18
PPP4R1-218ENST00000580745 SIN3AQ96ST3 1273 aa16.16■□□□□ 0.18
PPP4R1-218ENST00000580745 ADGRB2O60241 1585 aa16.16■□□□□ 0.18
PPP4R1-218ENST00000580745 FAM83GA6ND36 823 aa16.15■□□□□ 0.18
PPP4R1-218ENST00000580745 NUDT16Q96DE0 195 aaKnown RBP16.15■□□□□ 0.18
PPP4R1-218ENST00000580745 CDK19Q9BWU1 502 aa16.15■□□□□ 0.18
PPP4R1-218ENST00000580745 TULP4Q9NRJ4 1543 aa16.14■□□□□ 0.17
PPP4R1-218ENST00000580745 ARHGEF10O15013 1369 aa16.13■□□□□ 0.17
PPP4R1-218ENST00000580745 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
PPP4R1-218ENST00000580745 PAK3O75914 559 aaPredicted RBP16.13■□□□□ 0.17
PPP4R1-218ENST00000580745 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
PPP4R1-218ENST00000580745 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
PPP4R1-218ENST00000580745 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
PPP4R1-218ENST00000580745 RGPD8O14715 1765 aaPredicted RBP16.12■□□□□ 0.17
PPP4R1-218ENST00000580745 EIF3AQ14152 1382 aaKnown RBP16.12■□□□□ 0.17
PPP4R1-218ENST00000580745 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
PPP4R1-218ENST00000580745 CCDC9Q9Y3X0 531 aaKnown RBP16.11■□□□□ 0.17
PPP4R1-218ENST00000580745 ATP7BP35670 1465 aa16.1■□□□□ 0.17
PPP4R1-218ENST00000580745 VPS72Q15906 364 aa16.1■□□□□ 0.17
PPP4R1-218ENST00000580745 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
PPP4R1-218ENST00000580745 SEPT12Q8IYM1 358 aa16.09■□□□□ 0.17
PPP4R1-218ENST00000580745 GLI3P10071 1580 aa16.09■□□□□ 0.17
PPP4R1-218ENST00000580745 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
PPP4R1-218ENST00000580745 CABP2Q9NPB3 220 aa16.07■□□□□ 0.16
PPP4R1-218ENST00000580745 ACEP12821 1306 aa16.07■□□□□ 0.16
PPP4R1-218ENST00000580745 ARHGEF28Q8N1W1 1705 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-218ENST00000580745 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
PPP4R1-218ENST00000580745 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
PPP4R1-218ENST00000580745 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
PPP4R1-218ENST00000580745 SRPK2P78362 688 aaKnown RBP16.05■□□□□ 0.16
PPP4R1-218ENST00000580745 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms