RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ADGRL3Q9HAR2 1447 aa17.59■□□□□ 0.41
CCDC84-209ENST00000580556 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
CCDC84-209ENST00000580556 RPGRIP1LQ68CZ1 1315 aa17.57■□□□□ 0.4
CCDC84-209ENST00000580556 SIN3AQ96ST3 1273 aa17.57■□□□□ 0.4
CCDC84-209ENST00000580556 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
CCDC84-209ENST00000580556 EP400Q96L91 3159 aa17.56■□□□□ 0.4
CCDC84-209ENST00000580556 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
CCDC84-209ENST00000580556 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
CCDC84-209ENST00000580556 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
CCDC84-209ENST00000580556 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
CCDC84-209ENST00000580556 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
CCDC84-209ENST00000580556 ATRNO75882 1429 aa17.54■□□□□ 0.4
CCDC84-209ENST00000580556 SOS2Q07890 1332 aaPredicted RBP17.53■□□□□ 0.4
CCDC84-209ENST00000580556 MYOM2P54296 1465 aa17.53■□□□□ 0.4
CCDC84-209ENST00000580556 ZNF326Q5BKZ1 582 aaKnown RBP17.53■□□□□ 0.4
CCDC84-209ENST00000580556 STAC3Q96MF2 364 aa17.53■□□□□ 0.4
CCDC84-209ENST00000580556 TIMELESSQ9UNS1 1208 aa17.53■□□□□ 0.4
CCDC84-209ENST00000580556 PPLO60437 1756 aa17.53■□□□□ 0.4
CCDC84-209ENST00000580556 LAMC1P11047 1609 aa17.52■□□□□ 0.4
CCDC84-209ENST00000580556 NEUROD1Q13562 356 aa17.52■□□□□ 0.4
CCDC84-209ENST00000580556 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
CCDC84-209ENST00000580556 PTCH1Q13635 1447 aa17.5■□□□□ 0.39
CCDC84-209ENST00000580556 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
CCDC84-209ENST00000580556 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
CCDC84-209ENST00000580556 BCL9LQ86UU0 1499 aa17.48■□□□□ 0.39
CCDC84-209ENST00000580556 COL22A1Q8NFW1 1626 aaPredicted RBP17.47■□□□□ 0.39
CCDC84-209ENST00000580556 VGFO15240 615 aaPredicted RBP17.47■□□□□ 0.39
CCDC84-209ENST00000580556 L3MBTL2Q969R5 705 aa17.47■□□□□ 0.39
CCDC84-209ENST00000580556 ROBO2Q9HCK4 1378 aa17.47■□□□□ 0.39
CCDC84-209ENST00000580556 CCDC125Q86Z20 511 aa17.45■□□□□ 0.38
CCDC84-209ENST00000580556 PIK3C2GO75747 1445 aa17.45■□□□□ 0.38
CCDC84-209ENST00000580556 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
CCDC84-209ENST00000580556 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
CCDC84-209ENST00000580556 DCAF11Q8TEB1 546 aa17.44■□□□□ 0.38
CCDC84-209ENST00000580556 GJD4Q96KN9 370 aaPredicted RBP17.44■□□□□ 0.38
CCDC84-209ENST00000580556 MARF1Q9Y4F3 1742 aaKnown RBP17.43■□□□□ 0.38
CCDC84-209ENST00000580556 PRAG1Q86YV5 1406 aa17.42■□□□□ 0.38
CCDC84-209ENST00000580556 ADGRF5Q8IZF2 1346 aa17.41■□□□□ 0.38
CCDC84-209ENST00000580556 PXDNQ92626 1479 aa17.4■□□□□ 0.38
CCDC84-209ENST00000580556 GLI3P10071 1580 aa17.4■□□□□ 0.38
CCDC84-209ENST00000580556 ESCO1Q5FWF5 840 aa17.39■□□□□ 0.37
CCDC84-209ENST00000580556 BRWD3Q6RI45 1802 aa17.39■□□□□ 0.37
CCDC84-209ENST00000580556 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
CCDC84-209ENST00000580556 KIAA1210Q9ULL0 1709 aa17.38■□□□□ 0.37
CCDC84-209ENST00000580556 FOXO3O43524 673 aa17.38■□□□□ 0.37
CCDC84-209ENST00000580556 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
CCDC84-209ENST00000580556 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
CCDC84-209ENST00000580556 NPHP3Q7Z494 1330 aa17.37■□□□□ 0.37
CCDC84-209ENST00000580556 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
CCDC84-209ENST00000580556 NUTM2FA1L443 756 aa17.35■□□□□ 0.37
CCDC84-209ENST00000580556 UNC5CLQ8IV45 518 aa17.35■□□□□ 0.37
CCDC84-209ENST00000580556 SLIT2O94813 1529 aa17.34■□□□□ 0.37
CCDC84-209ENST00000580556 TRPM1Q7Z4N2 1603 aa17.34■□□□□ 0.37
CCDC84-209ENST00000580556 C14orf93Q9H972 538 aaKnown RBP17.34■□□□□ 0.37
CCDC84-209ENST00000580556 LRP5O75197 1615 aa17.33■□□□□ 0.37
CCDC84-209ENST00000580556 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.36
CCDC84-209ENST00000580556 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
CCDC84-209ENST00000580556 ADGRB1O14514 1584 aa17.32■□□□□ 0.36
CCDC84-209ENST00000580556 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
CCDC84-209ENST00000580556 CDC42BPGQ6DT37 1551 aa17.31■□□□□ 0.36
CCDC84-209ENST00000580556 GPRASP1Q5JY77 1395 aa17.3■□□□□ 0.36
CCDC84-209ENST00000580556 NBPF8Q3BBV2 869 aa17.3■□□□□ 0.36
CCDC84-209ENST00000580556 PLEKHG5O94827 1062 aa17.29■□□□□ 0.36
CCDC84-209ENST00000580556 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
CCDC84-209ENST00000580556 CFAP70Q5T0N1 1121 aa17.29■□□□□ 0.36
CCDC84-209ENST00000580556 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
CCDC84-209ENST00000580556 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
CCDC84-209ENST00000580556 CABLES1Q8TDN4 633 aa17.27■□□□□ 0.36
CCDC84-209ENST00000580556 USP32Q8NFA0 1604 aa17.27■□□□□ 0.36
CCDC84-209ENST00000580556 STK26Q9P289 416 aa17.26■□□□□ 0.35
CCDC84-209ENST00000580556 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
CCDC84-209ENST00000580556 PLEKHH1Q9ULM0 1364 aa17.26■□□□□ 0.35
CCDC84-209ENST00000580556 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
CCDC84-209ENST00000580556 TECPR2O15040 1411 aa17.25■□□□□ 0.35
CCDC84-209ENST00000580556 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
CCDC84-209ENST00000580556 LRPPRCP42704 1394 aaKnown RBP17.25■□□□□ 0.35
CCDC84-209ENST00000580556 YTHDC2Q9H6S0 1430 aaKnown RBP17.24■□□□□ 0.35
CCDC84-209ENST00000580556 VPS72Q15906 364 aa17.24■□□□□ 0.35
CCDC84-209ENST00000580556 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
CCDC84-209ENST00000580556 DLC1Q96QB1 1528 aa17.23■□□□□ 0.35
CCDC84-209ENST00000580556 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
CCDC84-209ENST00000580556 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
CCDC84-209ENST00000580556 PLCH1Q4KWH8 1693 aa17.23■□□□□ 0.35
CCDC84-209ENST00000580556 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
CCDC84-209ENST00000580556 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
CCDC84-209ENST00000580556 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
CCDC84-209ENST00000580556 HAP1P54257 671 aaPredicted RBP17.21■□□□□ 0.35
CCDC84-209ENST00000580556 BAG6P46379 1132 aa17.2■□□□□ 0.34
CCDC84-209ENST00000580556 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
CCDC84-209ENST00000580556 TMEM132EQ6IEE7 984 aa17.2■□□□□ 0.34
CCDC84-209ENST00000580556 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
CCDC84-209ENST00000580556 A0A0G2JS52 829 aa17.19■□□□□ 0.34
CCDC84-209ENST00000580556 MYT1Q01538 1121 aa17.19■□□□□ 0.34
CCDC84-209ENST00000580556 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
CCDC84-209ENST00000580556 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
CCDC84-209ENST00000580556 KIF1AQ12756 1690 aa17.18■□□□□ 0.34
CCDC84-209ENST00000580556 R3HDM1Q15032 1099 aaKnown RBP17.18■□□□□ 0.34
CCDC84-209ENST00000580556 CARD11Q9BXL7 1154 aa17.18■□□□□ 0.34
CCDC84-209ENST00000580556 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
CCDC84-209ENST00000580556 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms