RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SBNO2Q9Y2G9 1366 aa19.96■□□□□ 0.79
SKA2-205ENST00000580541 EVC2Q86UK5 1308 aa19.96■□□□□ 0.79
SKA2-205ENST00000580541 TMEM94Q12767 1356 aa19.95■□□□□ 0.79
SKA2-205ENST00000580541 MINK1Q8N4C8 1332 aaPredicted RBP19.95■□□□□ 0.78
SKA2-205ENST00000580541 PLEKHH1Q9ULM0 1364 aa19.94■□□□□ 0.78
SKA2-205ENST00000580541 STRCP1A6NGW2 1772 aa19.93■□□□□ 0.78
SKA2-205ENST00000580541 ATF3P18847 181 aa19.93■□□□□ 0.78
SKA2-205ENST00000580541 MSH6P52701 1360 aa19.93■□□□□ 0.78
SKA2-205ENST00000580541 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
SKA2-205ENST00000580541 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
SKA2-205ENST00000580541 TESK2Q96S53 571 aa19.92■□□□□ 0.78
SKA2-205ENST00000580541 WASLO00401 505 aaPredicted RBP19.91■□□□□ 0.78
SKA2-205ENST00000580541 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
SKA2-205ENST00000580541 RBM33Q96EV2 1170 aaKnown RBP19.91■□□□□ 0.78
SKA2-205ENST00000580541 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
SKA2-205ENST00000580541 ADGRL3Q9HAR2 1447 aa19.9■□□□□ 0.78
SKA2-205ENST00000580541 LTBP4Q8N2S1 1624 aa19.9■□□□□ 0.78
SKA2-205ENST00000580541 QRICH2Q9H0J4 1663 aa19.9■□□□□ 0.78
SKA2-205ENST00000580541 SRPK2P78362 688 aaKnown RBP19.89■□□□□ 0.77
SKA2-205ENST00000580541 CDK19Q9BWU1 502 aa19.89■□□□□ 0.77
SKA2-205ENST00000580541 DCCP43146 1447 aa19.87■□□□□ 0.77
SKA2-205ENST00000580541 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.85■□□□□ 0.77
SKA2-205ENST00000580541 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
SKA2-205ENST00000580541 IQSEC2Q5JU85 1478 aa19.84■□□□□ 0.77
SKA2-205ENST00000580541 ADGRB2O60241 1585 aa19.83■□□□□ 0.77
SKA2-205ENST00000580541 MSH5O43196 834 aa19.83■□□□□ 0.77
SKA2-205ENST00000580541 TOM1O60784 492 aa19.83■□□□□ 0.77
SKA2-205ENST00000580541 ATAD2Q6PL18 1390 aa19.83■□□□□ 0.76
SKA2-205ENST00000580541 ZNF316A6NFI3 1004 aaPredicted RBP19.82■□□□□ 0.76
SKA2-205ENST00000580541 CCDC61Q9Y6R9 512 aa19.82■□□□□ 0.76
SKA2-205ENST00000580541 NUDT16Q96DE0 195 aaKnown RBP19.81■□□□□ 0.76
SKA2-205ENST00000580541 CABP2Q9NPB3 220 aa19.81■□□□□ 0.76
SKA2-205ENST00000580541 CDC42BPGQ6DT37 1551 aa19.81■□□□□ 0.76
SKA2-205ENST00000580541 NALCNQ8IZF0 1738 aa19.8■□□□□ 0.76
SKA2-205ENST00000580541 POLR3GLQ9BT43 218 aa19.8■□□□□ 0.76
SKA2-205ENST00000580541 SLAIN2Q9P270 581 aa19.8■□□□□ 0.76
SKA2-205ENST00000580541 XIRP1Q702N8 1843 aaKnown RBP19.8■□□□□ 0.76
SKA2-205ENST00000580541 ANKARQ7Z5J8 1434 aa19.79■□□□□ 0.76
SKA2-205ENST00000580541 DISP3Q9P2K9 1392 aa19.78■□□□□ 0.76
SKA2-205ENST00000580541 NINLQ9Y2I6 1382 aa19.78■□□□□ 0.76
SKA2-205ENST00000580541 NUTM2FA1L443 756 aa19.77■□□□□ 0.76
SKA2-205ENST00000580541 TULP4Q9NRJ4 1543 aa19.76■□□□□ 0.75
SKA2-205ENST00000580541 ESCO1Q5FWF5 840 aa19.76■□□□□ 0.75
SKA2-205ENST00000580541 TMC1Q8TDI8 760 aa19.76■□□□□ 0.75
SKA2-205ENST00000580541 KIF7Q2M1P5 1343 aa19.75■□□□□ 0.75
SKA2-205ENST00000580541 FMN2Q9NZ56 1722 aa19.74■□□□□ 0.75
SKA2-205ENST00000580541 C11orf95C9JLR9 678 aaPredicted RBP19.74■□□□□ 0.75
SKA2-205ENST00000580541 TERF2IPQ9NYB0 399 aa19.74■□□□□ 0.75
SKA2-205ENST00000580541 CCDC7Q96M83 1385 aa19.73■□□□□ 0.75
SKA2-205ENST00000580541 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
SKA2-205ENST00000580541 UBAP1LF5GYI3 381 aa19.73■□□□□ 0.75
SKA2-205ENST00000580541 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
SKA2-205ENST00000580541 CABP1Q9NZU7 370 aa19.73■□□□□ 0.75
SKA2-205ENST00000580541 PHF8Q9UPP1 1060 aa19.73■□□□□ 0.75
SKA2-205ENST00000580541 MST1RQ04912 1400 aa19.72■□□□□ 0.75
SKA2-205ENST00000580541 HDGFL2Q7Z4V5 671 aaPredicted RBP19.72■□□□□ 0.75
SKA2-205ENST00000580541 NGDNQ8NEJ9 315 aaKnown RBP19.72■□□□□ 0.75
SKA2-205ENST00000580541 C1orf167Q5SNV9 1468 aa19.72■□□□□ 0.75
SKA2-205ENST00000580541 WASHC2AQ641Q2 1341 aa19.72■□□□□ 0.75
SKA2-205ENST00000580541 PRR36Q9H6K5 1346 aa19.71■□□□□ 0.75
SKA2-205ENST00000580541 PPIP5K1Q6PFW1 1433 aa19.7■□□□□ 0.74
SKA2-205ENST00000580541 ATP7BP35670 1465 aa19.69■□□□□ 0.74
SKA2-205ENST00000580541 ITSN1Q15811 1721 aa19.69■□□□□ 0.74
SKA2-205ENST00000580541 SLC12A5Q9H2X9 1139 aa19.69■□□□□ 0.74
SKA2-205ENST00000580541 PSME1Q06323 249 aa19.68■□□□□ 0.74
SKA2-205ENST00000580541 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
SKA2-205ENST00000580541 PMFBP1Q8TBY8 1022 aa19.67■□□□□ 0.74
SKA2-205ENST00000580541 RGPD8O14715 1765 aaPredicted RBP19.65■□□□□ 0.74
SKA2-205ENST00000580541 BRINP3Q76B58 766 aa19.65■□□□□ 0.74
SKA2-205ENST00000580541 ACEP12821 1306 aa19.65■□□□□ 0.74
SKA2-205ENST00000580541 NPHP3Q7Z494 1330 aa19.65■□□□□ 0.74
SKA2-205ENST00000580541 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
SKA2-205ENST00000580541 FOXO3O43524 673 aa19.64■□□□□ 0.73
SKA2-205ENST00000580541 PIP4K2BP78356 416 aa19.64■□□□□ 0.73
SKA2-205ENST00000580541 BRD4O60885 1362 aaPredicted RBP19.64■□□□□ 0.73
SKA2-205ENST00000580541 KIF1AQ12756 1690 aa19.63■□□□□ 0.73
SKA2-205ENST00000580541 USP32Q8NFA0 1604 aa19.63■□□□□ 0.73
SKA2-205ENST00000580541 POLR3AO14802 1390 aaPredicted RBP19.63■□□□□ 0.73
SKA2-205ENST00000580541 ANKRD36BQ8N2N9 1353 aa19.63■□□□□ 0.73
SKA2-205ENST00000580541 ADRA2BP18089 450 aa19.63■□□□□ 0.73
SKA2-205ENST00000580541 PANK3Q9H999 370 aa19.63■□□□□ 0.73
SKA2-205ENST00000580541 KTN1Q86UP2 1357 aaKnown RBP19.61■□□□□ 0.73
SKA2-205ENST00000580541 DDX10Q13206 875 aaKnown RBP19.61■□□□□ 0.73
SKA2-205ENST00000580541 TOPAZ1Q8N9V7 1692 aa19.6■□□□□ 0.73
SKA2-205ENST00000580541 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
SKA2-205ENST00000580541 KNSTRNQ9Y448 316 aa19.6■□□□□ 0.73
SKA2-205ENST00000580541 CPSF1Q10570 1443 aaKnown RBP19.59■□□□□ 0.73
SKA2-205ENST00000580541 A0A1W2PP64 1363 aa19.57■□□□□ 0.72
SKA2-205ENST00000580541 TTC21AQ8NDW8 1320 aa19.56■□□□□ 0.72
SKA2-205ENST00000580541 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
SKA2-205ENST00000580541 USP6P35125 1406 aa19.55■□□□□ 0.72
SKA2-205ENST00000580541 EDC4Q6P2E9 1401 aaKnown RBP19.55■□□□□ 0.72
SKA2-205ENST00000580541 LRRC59Q96AG4 307 aaKnown RBP19.55■□□□□ 0.72
SKA2-205ENST00000580541 ROBO1Q9Y6N7 1651 aa19.55■□□□□ 0.72
SKA2-205ENST00000580541 CGNL1Q0VF96 1302 aa19.54■□□□□ 0.72
SKA2-205ENST00000580541 SOS2Q07890 1332 aaPredicted RBP19.53■□□□□ 0.72
SKA2-205ENST00000580541 MYOM1P52179 1685 aa19.53■□□□□ 0.72
SKA2-205ENST00000580541 CARD14Q9BXL6 1004 aa19.53■□□□□ 0.72
SKA2-205ENST00000580541 SBNO1A3KN83 1393 aa19.53■□□□□ 0.72
SKA2-205ENST00000580541 CD163L1Q9NR16 1453 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms