RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 PRR20BP86481 221 aa7.36□□□□□ -1.23
DDX42-211ENST00000580108 PRR20AP86496 221 aa7.36□□□□□ -1.23
DDX42-211ENST00000580108 FAM160A2Q8N612 972 aaPredicted RBP7.36□□□□□ -1.23
DDX42-211ENST00000580108 SLC27A5Q9Y2P5 690 aa7.36□□□□□ -1.23
DDX42-211ENST00000580108 FANCD2Q9BXW9 1451 aa7.36□□□□□ -1.23
DDX42-211ENST00000580108 PRDM2Q13029 1718 aa7.35□□□□□ -1.23
DDX42-211ENST00000580108 TNFRSF10AO00220 468 aa7.35□□□□□ -1.23
DDX42-211ENST00000580108 ATP6V1AP38606 617 aa7.35□□□□□ -1.23
DDX42-211ENST00000580108 PRDM9Q9NQV7 894 aa7.35□□□□□ -1.23
DDX42-211ENST00000580108 WDR62O43379 1518 aa7.35□□□□□ -1.23
DDX42-211ENST00000580108 CEP164Q9UPV0 1460 aa7.35□□□□□ -1.23
DDX42-211ENST00000580108 MYT1Q01538 1121 aa7.34□□□□□ -1.23
DDX42-211ENST00000580108 CFTRP13569 1480 aa7.34□□□□□ -1.23
DDX42-211ENST00000580108 RNF19BQ6ZMZ0 732 aa7.33□□□□□ -1.24
DDX42-211ENST00000580108 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
DDX42-211ENST00000580108 PKD2L1Q9P0L9 805 aa7.33□□□□□ -1.24
DDX42-211ENST00000580108 URB2Q14146 1524 aaKnown RBP7.32□□□□□ -1.24
DDX42-211ENST00000580108 FMNL1O95466 1100 aaPredicted RBP7.32□□□□□ -1.24
DDX42-211ENST00000580108 MAP2K5Q13163 448 aa7.32□□□□□ -1.24
DDX42-211ENST00000580108 BRICD5Q6PL45 260 aa7.32□□□□□ -1.24
DDX42-211ENST00000580108 FCF1Q9Y324 198 aaKnown RBP7.32□□□□□ -1.24
DDX42-211ENST00000580108 DGAT1O75907 488 aa7.31□□□□□ -1.24
DDX42-211ENST00000580108 CD46P15529 392 aa7.31□□□□□ -1.24
DDX42-211ENST00000580108 PKDCCQ504Y2 493 aa7.31□□□□□ -1.24
DDX42-211ENST00000580108 ZNF787Q6DD87 383 aa7.31□□□□□ -1.24
DDX42-211ENST00000580108 FAM187AA6NFU0 413 aa7.3□□□□□ -1.24
DDX42-211ENST00000580108 SALL2Q9Y467 1007 aaPredicted RBP7.3□□□□□ -1.24
DDX42-211ENST00000580108 POTECB2RU33 542 aa7.29□□□□□ -1.24
DDX42-211ENST00000580108 IRF6O14896 467 aa7.29□□□□□ -1.24
DDX42-211ENST00000580108 RPIAP49247 311 aa7.29□□□□□ -1.24
DDX42-211ENST00000580108 FOXC1Q12948 553 aa7.29□□□□□ -1.24
DDX42-211ENST00000580108 VSIG10Q8N0Z9 540 aa7.29□□□□□ -1.24
DDX42-211ENST00000580108 MDM2Q00987 491 aaPredicted RBP7.28□□□□□ -1.24
DDX42-211ENST00000580108 MSS51Q4VC12 460 aa7.28□□□□□ -1.24
DDX42-211ENST00000580108 HLA-CQ95604 372 aa7.28□□□□□ -1.24
DDX42-211ENST00000580108 ST8SIA5O15466 376 aa7.27□□□□□ -1.25
DDX42-211ENST00000580108 CCDC102AQ96A19 550 aa7.27□□□□□ -1.25
DDX42-211ENST00000580108 MINK1Q8N4C8 1332 aaPredicted RBP7.26□□□□□ -1.25
DDX42-211ENST00000580108 LMOD2Q6P5Q4 547 aa7.25□□□□□ -1.25
DDX42-211ENST00000580108 ZNF775Q96BV0 537 aaPredicted RBP7.25□□□□□ -1.25
DDX42-211ENST00000580108 TOR4AQ9NXH8 423 aa7.25□□□□□ -1.25
DDX42-211ENST00000580108 TOPBP1Q92547 1522 aa7.24□□□□□ -1.25
DDX42-211ENST00000580108 SUPT5HO00267 1087 aaKnown RBP7.24□□□□□ -1.25
DDX42-211ENST00000580108 KDM4AO75164 1064 aa7.24□□□□□ -1.25
DDX42-211ENST00000580108 MMP16P51512 607 aa7.24□□□□□ -1.25
DDX42-211ENST00000580108 GRIPAP1Q4V328 841 aa7.24□□□□□ -1.25
DDX42-211ENST00000580108 AAASQ9NRG9 546 aa7.24□□□□□ -1.25
DDX42-211ENST00000580108 ZNF608Q9ULD9 1512 aaPredicted RBP7.23□□□□□ -1.25
DDX42-211ENST00000580108 GUCA2AQ02747 115 aa7.23□□□□□ -1.25
DDX42-211ENST00000580108 TULP1O00294 542 aaPredicted RBP7.22□□□□□ -1.25
DDX42-211ENST00000580108 HOXA2O43364 376 aa7.22□□□□□ -1.25
DDX42-211ENST00000580108 DXOO77932 396 aaKnown RBP7.22□□□□□ -1.25
DDX42-211ENST00000580108 CD2BP2O95400 341 aaKnown RBP7.22□□□□□ -1.25
DDX42-211ENST00000580108 Q3C1V9 767 aa7.22□□□□□ -1.25
DDX42-211ENST00000580108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.22□□□□□ -1.25
DDX42-211ENST00000580108 FAM217BQ9NTX9 383 aaPredicted RBP7.22□□□□□ -1.25
DDX42-211ENST00000580108 DACH1Q9UI36 760 aa7.22□□□□□ -1.25
DDX42-211ENST00000580108 DNMBPQ6XZF7 1577 aa7.21□□□□□ -1.25
DDX42-211ENST00000580108 USB1Q9BQ65 265 aaKnown RBP7.21□□□□□ -1.26
DDX42-211ENST00000580108 REPIN1Q9BWE0 567 aaKnown RBP7.21□□□□□ -1.26
DDX42-211ENST00000580108 AVPP01185 164 aa7.2□□□□□ -1.26
DDX42-211ENST00000580108 TRIM32Q13049 653 aa7.2□□□□□ -1.26
DDX42-211ENST00000580108 CYP4X1Q8N118 509 aa7.2□□□□□ -1.26
DDX42-211ENST00000580108 CRIPAKQ8N1N5 446 aa7.2□□□□□ -1.26
DDX42-211ENST00000580108 GPCPD1Q9NPB8 672 aa7.2□□□□□ -1.26
DDX42-211ENST00000580108 EIF4G3O43432 1585 aaKnown RBP7.2□□□□□ -1.26
DDX42-211ENST00000580108 USP46P62068 366 aa7.19□□□□□ -1.26
DDX42-211ENST00000580108 SYMPKQ92797 1274 aaKnown RBP7.19□□□□□ -1.26
DDX42-211ENST00000580108 TARBP1Q13395 1621 aaKnown RBP7.19□□□□□ -1.26
DDX42-211ENST00000580108 RAD54L2Q9Y4B4 1467 aa7.18□□□□□ -1.26
DDX42-211ENST00000580108 WNT7AO00755 349 aa7.18□□□□□ -1.26
DDX42-211ENST00000580108 ZBTB24O43167 697 aaPredicted RBP7.18□□□□□ -1.26
DDX42-211ENST00000580108 CLCN1P35523 988 aa7.18□□□□□ -1.26
DDX42-211ENST00000580108 IFT140Q96RY7 1462 aa7.17□□□□□ -1.26
DDX42-211ENST00000580108 CUX1P39880 1505 aa7.17□□□□□ -1.26
DDX42-211ENST00000580108 SMPD1P17405 629 aa7.17□□□□□ -1.26
DDX42-211ENST00000580108 CHD1O14646 1710 aa7.17□□□□□ -1.26
DDX42-211ENST00000580108 AQRO60306 1485 aaKnown RBP eCLIP7.17□□□□□ -1.261e-32■■■■■ 50.6
DDX42-211ENST00000580108 POLA1P09884 1462 aaPredicted RBP7.17□□□□□ -1.26
DDX42-211ENST00000580108 SKOR1P84550 965 aa7.16□□□□□ -1.26
DDX42-211ENST00000580108 MRGPRX2Q96LB1 330 aa7.16□□□□□ -1.26
DDX42-211ENST00000580108 TTC24A2A3L6 582 aaPredicted RBP7.15□□□□□ -1.26
DDX42-211ENST00000580108 J3QL48 77 aa7.15□□□□□ -1.26
DDX42-211ENST00000580108 JUNDP17535 347 aa7.15□□□□□ -1.26
DDX42-211ENST00000580108 SMCPP49901 116 aaPredicted RBP7.15□□□□□ -1.26
DDX42-211ENST00000580108 PCDHGC3Q9UN70 934 aa7.15□□□□□ -1.26
DDX42-211ENST00000580108 FGD5Q6ZNL6 1462 aa7.15□□□□□ -1.27
DDX42-211ENST00000580108 CCDC24Q8N4L8 307 aa7.14□□□□□ -1.27
DDX42-211ENST00000580108 SNIP1Q8TAD8 396 aaKnown RBP7.14□□□□□ -1.27
DDX42-211ENST00000580108 GMPR2Q9P2T1 348 aaKnown RBP7.14□□□□□ -1.27
DDX42-211ENST00000580108 ABCC8Q09428 1581 aa7.13□□□□□ -1.27
DDX42-211ENST00000580108 AXIN1O15169 862 aa7.13□□□□□ -1.27
DDX42-211ENST00000580108 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
DDX42-211ENST00000580108 PTCRAQ6ISU1 281 aaPredicted RBP7.13□□□□□ -1.27
DDX42-211ENST00000580108 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
DDX42-211ENST00000580108 WDR97A6NE52 1622 aa7.12□□□□□ -1.27
DDX42-211ENST00000580108 TDRD9Q8NDG6 1382 aaKnown RBP7.12□□□□□ -1.27
DDX42-211ENST00000580108 ZMYND10O75800 440 aa7.12□□□□□ -1.27
DDX42-211ENST00000580108 SSTR3P32745 418 aaPredicted RBP7.12□□□□□ -1.27
DDX42-211ENST00000580108 CTC1Q2NKJ3 1217 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms