RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SEPT12Q8IYM1 358 aa20.38■□□□□ 0.85
CDK5RAP3-213ENST00000579605 ROBO2Q9HCK4 1378 aa20.37■□□□□ 0.85
CDK5RAP3-213ENST00000579605 HRCP23327 699 aa20.37■□□□□ 0.85
CDK5RAP3-213ENST00000579605 RALGAPBQ86X10 1494 aa20.37■□□□□ 0.85
CDK5RAP3-213ENST00000579605 NPHP3Q7Z494 1330 aa20.36■□□□□ 0.85
CDK5RAP3-213ENST00000579605 NUTM2FA1L443 756 aa20.34■□□□□ 0.85
CDK5RAP3-213ENST00000579605 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
CDK5RAP3-213ENST00000579605 CCDC9Q9Y3X0 531 aaKnown RBP20.34■□□□□ 0.85
CDK5RAP3-213ENST00000579605 LAMC1P11047 1609 aa20.34■□□□□ 0.85
CDK5RAP3-213ENST00000579605 COL22A1Q8NFW1 1626 aaPredicted RBP20.32■□□□□ 0.84
CDK5RAP3-213ENST00000579605 LRP5O75197 1615 aa20.31■□□□□ 0.84
CDK5RAP3-213ENST00000579605 BAG6P46379 1132 aa20.31■□□□□ 0.84
CDK5RAP3-213ENST00000579605 KRT27Q7Z3Y8 459 aa20.31■□□□□ 0.84
CDK5RAP3-213ENST00000579605 GLI3P10071 1580 aa20.3■□□□□ 0.84
CDK5RAP3-213ENST00000579605 A0A0G2JS52 829 aa20.3■□□□□ 0.84
CDK5RAP3-213ENST00000579605 MYT1Q01538 1121 aa20.3■□□□□ 0.84
CDK5RAP3-213ENST00000579605 ITGAEP38570 1179 aa20.29■□□□□ 0.84
CDK5RAP3-213ENST00000579605 HAP1P54257 671 aaPredicted RBP20.29■□□□□ 0.84
CDK5RAP3-213ENST00000579605 IQGAP3Q86VI3 1631 aa20.28■□□□□ 0.84
CDK5RAP3-213ENST00000579605 R3HDM1Q15032 1099 aaKnown RBP20.28■□□□□ 0.84
CDK5RAP3-213ENST00000579605 PXDNQ92626 1479 aa20.27■□□□□ 0.84
CDK5RAP3-213ENST00000579605 SLIT2O94813 1529 aa20.27■□□□□ 0.83
CDK5RAP3-213ENST00000579605 EN1Q05925 392 aaPredicted RBP20.26■□□□□ 0.83
CDK5RAP3-213ENST00000579605 VPS72Q15906 364 aa20.26■□□□□ 0.83
CDK5RAP3-213ENST00000579605 YY1P25490 414 aa20.25■□□□□ 0.83
CDK5RAP3-213ENST00000579605 LRPPRCP42704 1394 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-213ENST00000579605 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
CDK5RAP3-213ENST00000579605 VGFO15240 615 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-213ENST00000579605 CABLES1Q8TDN4 633 aa20.23■□□□□ 0.83
CDK5RAP3-213ENST00000579605 HFM1A2PYH4 1435 aa20.22■□□□□ 0.83
CDK5RAP3-213ENST00000579605 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
CDK5RAP3-213ENST00000579605 BRWD3Q6RI45 1802 aa20.22■□□□□ 0.83
CDK5RAP3-213ENST00000579605 SPATA31A3Q5VYP0 1347 aa20.22■□□□□ 0.83
CDK5RAP3-213ENST00000579605 KRT28Q7Z3Y7 464 aa20.21■□□□□ 0.83
CDK5RAP3-213ENST00000579605 MARF1Q9Y4F3 1742 aaKnown RBP20.21■□□□□ 0.83
CDK5RAP3-213ENST00000579605 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
CDK5RAP3-213ENST00000579605 FAM182BQ5T319 152 aa20.2■□□□□ 0.82
CDK5RAP3-213ENST00000579605 STK26Q9P289 416 aa20.2■□□□□ 0.82
CDK5RAP3-213ENST00000579605 FAM98CQ17RN3 349 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-213ENST00000579605 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
CDK5RAP3-213ENST00000579605 WAPLQ7Z5K2 1190 aa20.19■□□□□ 0.82
CDK5RAP3-213ENST00000579605 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-213ENST00000579605 SPHKAPQ2M3C7 1700 aa20.16■□□□□ 0.82
CDK5RAP3-213ENST00000579605 NAIPQ13075 1403 aa20.16■□□□□ 0.82
CDK5RAP3-213ENST00000579605 CLTCL1P53675 1640 aa20.15■□□□□ 0.82
CDK5RAP3-213ENST00000579605 EZH2Q15910 746 aaKnown RBP20.14■□□□□ 0.81
CDK5RAP3-213ENST00000579605 FAM83GA6ND36 823 aa20.13■□□□□ 0.81
CDK5RAP3-213ENST00000579605 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
CDK5RAP3-213ENST00000579605 PRAG1Q86YV5 1406 aa20.11■□□□□ 0.81
CDK5RAP3-213ENST00000579605 PSME1Q06323 249 aa20.11■□□□□ 0.81
CDK5RAP3-213ENST00000579605 USP32Q8NFA0 1604 aa20.11■□□□□ 0.81
CDK5RAP3-213ENST00000579605 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
CDK5RAP3-213ENST00000579605 RPGRIP1LQ68CZ1 1315 aa20.09■□□□□ 0.81
CDK5RAP3-213ENST00000579605 BTG4Q9NY30 223 aa20.08■□□□□ 0.81
CDK5RAP3-213ENST00000579605 PLEKHH1Q9ULM0 1364 aa20.08■□□□□ 0.8
CDK5RAP3-213ENST00000579605 TMEM132EQ6IEE7 984 aa20.07■□□□□ 0.8
CDK5RAP3-213ENST00000579605 PHF8Q9UPP1 1060 aa20.07■□□□□ 0.8
CDK5RAP3-213ENST00000579605 TNS3Q68CZ2 1445 aa20.06■□□□□ 0.8
CDK5RAP3-213ENST00000579605 DCAF8L1A6NGE4 600 aa20.04■□□□□ 0.8
CDK5RAP3-213ENST00000579605 TRIM37O94972 964 aa20.04■□□□□ 0.8
CDK5RAP3-213ENST00000579605 CAMKK2Q96RR4 588 aa20.04■□□□□ 0.8
CDK5RAP3-213ENST00000579605 PPP1R1BQ9UD71 204 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP3-213ENST00000579605 ADGRF5Q8IZF2 1346 aa20.03■□□□□ 0.8
CDK5RAP3-213ENST00000579605 APBA3O96018 575 aa20.03■□□□□ 0.8
CDK5RAP3-213ENST00000579605 KIF1BO60333 1816 aa20.03■□□□□ 0.8
CDK5RAP3-213ENST00000579605 PLCH1Q4KWH8 1693 aa20.02■□□□□ 0.8
CDK5RAP3-213ENST00000579605 RGL3Q3MIN7 710 aa20■□□□□ 0.79
CDK5RAP3-213ENST00000579605 PMFBP1Q8TBY8 1022 aa20■□□□□ 0.79
CDK5RAP3-213ENST00000579605 ARHGEF10O15013 1369 aa19.99■□□□□ 0.79
CDK5RAP3-213ENST00000579605 SPATA31A5Q5VU36 1347 aa19.99■□□□□ 0.79
CDK5RAP3-213ENST00000579605 SPATA31A7Q8IWB4 1347 aa19.99■□□□□ 0.79
CDK5RAP3-213ENST00000579605 NWD2Q9ULI1 1742 aa19.99■□□□□ 0.79
CDK5RAP3-213ENST00000579605 SBNO1A3KN83 1393 aa19.98■□□□□ 0.79
CDK5RAP3-213ENST00000579605 DISP2A7MBM2 1401 aa19.98■□□□□ 0.79
CDK5RAP3-213ENST00000579605 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 RGPD1P0DJD0 1748 aa19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 NBPF14Q5TI25 921 aa19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-213ENST00000579605 SAFB2Q14151 953 aaKnown RBP eCLIP19.96■□□□□ 0.79
CDK5RAP3-213ENST00000579605 FAM196AQ6ZSG2 479 aa19.96■□□□□ 0.79
CDK5RAP3-213ENST00000579605 KIF1AQ12756 1690 aa19.96■□□□□ 0.79
CDK5RAP3-213ENST00000579605 TECPR2O15040 1411 aa19.95■□□□□ 0.78
CDK5RAP3-213ENST00000579605 SPON1Q9HCB6 807 aa19.95■□□□□ 0.78
CDK5RAP3-213ENST00000579605 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP3-213ENST00000579605 FMN2Q9NZ56 1722 aa19.93■□□□□ 0.78
CDK5RAP3-213ENST00000579605 KCNQ2O43526 872 aa19.92■□□□□ 0.78
CDK5RAP3-213ENST00000579605 STRN4Q9NRL3 753 aa19.91■□□□□ 0.78
CDK5RAP3-213ENST00000579605 RRBP1Q9P2E9 1410 aaKnown RBP19.91■□□□□ 0.78
CDK5RAP3-213ENST00000579605 PPLO60437 1756 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 SENP3-EIF4A1A0A087X0R7 540 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 PRDM11Q9NQV5 511 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 USP35Q9P2H5 1018 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 NRXN1Q9ULB1 1477 aa19.9■□□□□ 0.78
CDK5RAP3-213ENST00000579605 TNS1Q9HBL0 1735 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-213ENST00000579605 NRAPQ86VF7 1730 aa19.88■□□□□ 0.77
CDK5RAP3-213ENST00000579605 PARD3Q8TEW0 1356 aa19.88■□□□□ 0.77
CDK5RAP3-213ENST00000579605 PDE3BQ13370 1112 aa19.88■□□□□ 0.77
CDK5RAP3-213ENST00000579605 ABCA3Q99758 1704 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms