RNA–Protein interactions for RNA: ENST00000579378.1

AC011840.3-201, humanhuman

TSL 3 BASIC

Gene AC011840.3, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.3-201ENST00000579378 ESCO1Q5FWF5 840 aa12.73□□□□□ -0.37
AC011840.3-201ENST00000579378 MARF1Q9Y4F3 1742 aaKnown RBP12.72□□□□□ -0.37
AC011840.3-201ENST00000579378 FOXO3O43524 673 aa12.72□□□□□ -0.37
AC011840.3-201ENST00000579378 FOXD1Q16676 465 aa12.72□□□□□ -0.37
AC011840.3-201ENST00000579378 CCDC125Q86Z20 511 aa12.72□□□□□ -0.37
AC011840.3-201ENST00000579378 BCL9LQ86UU0 1499 aa12.72□□□□□ -0.37
AC011840.3-201ENST00000579378 HFM1A2PYH4 1435 aa12.71□□□□□ -0.37
AC011840.3-201ENST00000579378 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.37
AC011840.3-201ENST00000579378 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
AC011840.3-201ENST00000579378 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
AC011840.3-201ENST00000579378 PPLO60437 1756 aa12.71□□□□□ -0.38
AC011840.3-201ENST00000579378 NAIPQ13075 1403 aa12.71□□□□□ -0.38
AC011840.3-201ENST00000579378 XPCQ01831 940 aaPredicted RBP12.7□□□□□ -0.38
AC011840.3-201ENST00000579378 MYOM2P54296 1465 aa12.7□□□□□ -0.38
AC011840.3-201ENST00000579378 PXDNQ92626 1479 aa12.68□□□□□ -0.38
AC011840.3-201ENST00000579378 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
AC011840.3-201ENST00000579378 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
AC011840.3-201ENST00000579378 NUTM2FA1L443 756 aa12.67□□□□□ -0.38
AC011840.3-201ENST00000579378 STK26Q9P289 416 aa12.67□□□□□ -0.38
AC011840.3-201ENST00000579378 CDC42BPGQ6DT37 1551 aa12.66□□□□□ -0.38
AC011840.3-201ENST00000579378 UNC5CLQ8IV45 518 aa12.66□□□□□ -0.38
AC011840.3-201ENST00000579378 LRPPRCP42704 1394 aaKnown RBP12.66□□□□□ -0.38
AC011840.3-201ENST00000579378 ADGRF5Q8IZF2 1346 aa12.65□□□□□ -0.38
AC011840.3-201ENST00000579378 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
AC011840.3-201ENST00000579378 RRBP1Q9P2E9 1410 aaKnown RBP12.64□□□□□ -0.39
AC011840.3-201ENST00000579378 RGL3Q3MIN7 710 aa12.64□□□□□ -0.39
AC011840.3-201ENST00000579378 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
AC011840.3-201ENST00000579378 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.64□□□□□ -0.39
AC011840.3-201ENST00000579378 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
AC011840.3-201ENST00000579378 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
AC011840.3-201ENST00000579378 RGPD8O14715 1765 aaPredicted RBP12.63□□□□□ -0.39
AC011840.3-201ENST00000579378 SLIT2O94813 1529 aa12.62□□□□□ -0.39
AC011840.3-201ENST00000579378 GLI3P10071 1580 aa12.62□□□□□ -0.39
AC011840.3-201ENST00000579378 RALGAPBQ86X10 1494 aa12.62□□□□□ -0.39
AC011840.3-201ENST00000579378 ABCC11Q96J66 1382 aa12.62□□□□□ -0.39
AC011840.3-201ENST00000579378 TECPR2O15040 1411 aa12.62□□□□□ -0.39
AC011840.3-201ENST00000579378 BLMP54132 1417 aaPredicted RBP12.62□□□□□ -0.39
AC011840.3-201ENST00000579378 PLEKHH1Q9ULM0 1364 aa12.61□□□□□ -0.39
AC011840.3-201ENST00000579378 DEFB132Q7Z7B7 95 aa12.61□□□□□ -0.39
AC011840.3-201ENST00000579378 FMN2Q9NZ56 1722 aa12.6□□□□□ -0.39
AC011840.3-201ENST00000579378 CABLES1Q8TDN4 633 aa12.6□□□□□ -0.39
AC011840.3-201ENST00000579378 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
AC011840.3-201ENST00000579378 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
AC011840.3-201ENST00000579378 SIRT1Q96EB6 747 aa12.59□□□□□ -0.39
AC011840.3-201ENST00000579378 IFT172Q9UG01 1749 aa12.59□□□□□ -0.39
AC011840.3-201ENST00000579378 ANKRD30BQ9BXX2 1392 aa12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 CCDC144AA2RUR9 1427 aa12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 PSME1Q06323 249 aa12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 SF3B2Q13435 895 aaKnown RBP12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 VPS72Q15906 364 aa12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 PHF8Q9UPP1 1060 aa12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 USP32Q8NFA0 1604 aa12.58□□□□□ -0.4
AC011840.3-201ENST00000579378 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
AC011840.3-201ENST00000579378 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
AC011840.3-201ENST00000579378 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
AC011840.3-201ENST00000579378 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
AC011840.3-201ENST00000579378 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
AC011840.3-201ENST00000579378 MPHOSPH9Q99550 1183 aa12.56□□□□□ -0.4
AC011840.3-201ENST00000579378 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
AC011840.3-201ENST00000579378 NWD2Q9ULI1 1742 aa12.55□□□□□ -0.4
AC011840.3-201ENST00000579378 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
AC011840.3-201ENST00000579378 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
AC011840.3-201ENST00000579378 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
AC011840.3-201ENST00000579378 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
AC011840.3-201ENST00000579378 TNS3Q68CZ2 1445 aa12.54□□□□□ -0.4
AC011840.3-201ENST00000579378 PLCH1Q4KWH8 1693 aa12.54□□□□□ -0.4
AC011840.3-201ENST00000579378 SBNO1A3KN83 1393 aa12.54□□□□□ -0.4
AC011840.3-201ENST00000579378 SAFB2Q14151 953 aaKnown RBP eCLIP12.52□□□□□ -0.41
AC011840.3-201ENST00000579378 CFAP70Q5T0N1 1121 aa12.52□□□□□ -0.41
AC011840.3-201ENST00000579378 PMFBP1Q8TBY8 1022 aa12.52□□□□□ -0.41
AC011840.3-201ENST00000579378 DHX57Q6P158 1386 aaKnown RBP12.52□□□□□ -0.41
AC011840.3-201ENST00000579378 NRXN1Q9ULB1 1477 aa12.52□□□□□ -0.41
AC011840.3-201ENST00000579378 ABCA3Q99758 1704 aa12.51□□□□□ -0.41
AC011840.3-201ENST00000579378 PSDA5PKW4 1024 aaPredicted RBP12.51□□□□□ -0.41
AC011840.3-201ENST00000579378 BAG6P46379 1132 aa12.51□□□□□ -0.41
AC011840.3-201ENST00000579378 PRAM1Q96QH2 718 aa12.51□□□□□ -0.41
AC011840.3-201ENST00000579378 ARHGEF10O15013 1369 aa12.51□□□□□ -0.41
AC011840.3-201ENST00000579378 A0A0G2JS52 829 aa12.5□□□□□ -0.41
AC011840.3-201ENST00000579378 MYT1Q01538 1121 aa12.5□□□□□ -0.41
AC011840.3-201ENST00000579378 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
AC011840.3-201ENST00000579378 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
AC011840.3-201ENST00000579378 LRP5O75197 1615 aa12.5□□□□□ -0.41
AC011840.3-201ENST00000579378 HRCP23327 699 aa12.49□□□□□ -0.41
AC011840.3-201ENST00000579378 POGKQ9P215 609 aa12.49□□□□□ -0.41
AC011840.3-201ENST00000579378 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
AC011840.3-201ENST00000579378 NRAPQ86VF7 1730 aa12.48□□□□□ -0.41
AC011840.3-201ENST00000579378 FAM182BQ5T319 152 aa12.47□□□□□ -0.41
AC011840.3-201ENST00000579378 TRPM3Q9HCF6 1732 aaPredicted RBP12.46□□□□□ -0.41
AC011840.3-201ENST00000579378 ANKARQ7Z5J8 1434 aa12.45□□□□□ -0.42
AC011840.3-201ENST00000579378 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
AC011840.3-201ENST00000579378 SPATA31A5Q5VU36 1347 aa12.45□□□□□ -0.42
AC011840.3-201ENST00000579378 SPATA31A7Q8IWB4 1347 aa12.45□□□□□ -0.42
AC011840.3-201ENST00000579378 HIRIP3Q9BW71 556 aaPredicted RBP12.45□□□□□ -0.42
AC011840.3-201ENST00000579378 COL14A1Q05707 1796 aaKnown RBP12.45□□□□□ -0.42
AC011840.3-201ENST00000579378 DLC1Q96QB1 1528 aa12.44□□□□□ -0.42
AC011840.3-201ENST00000579378 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
AC011840.3-201ENST00000579378 RGPD1P0DJD0 1748 aa12.44□□□□□ -0.42
AC011840.3-201ENST00000579378 GPRASP1Q5JY77 1395 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms