RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 RRBP1Q9P2E9 1410 aaKnown RBP5.77□□□□□ -1.49
NUP85-209ENST00000578987 PLEKHG5O94827 1062 aa5.77□□□□□ -1.49
NUP85-209ENST00000578987 ESCO1Q5FWF5 840 aa5.77□□□□□ -1.49
NUP85-209ENST00000578987 PNPLA6Q8IY17 1366 aa5.77□□□□□ -1.49
NUP85-209ENST00000578987 C1orf167Q5SNV9 1468 aa5.77□□□□□ -1.49
NUP85-209ENST00000578987 DCCP43146 1447 aa5.76□□□□□ -1.49
NUP85-209ENST00000578987 FOXO3O43524 673 aa5.76□□□□□ -1.49
NUP85-209ENST00000578987 RBM6P78332 1123 aaKnown RBP5.76□□□□□ -1.49
NUP85-209ENST00000578987 MPHOSPH9Q99550 1183 aa5.76□□□□□ -1.49
NUP85-209ENST00000578987 USP21Q9UK80 565 aa5.76□□□□□ -1.49
NUP85-209ENST00000578987 IFT172Q9UG01 1749 aa5.76□□□□□ -1.49
NUP85-209ENST00000578987 BRWD3Q6RI45 1802 aa5.76□□□□□ -1.49
NUP85-209ENST00000578987 RPGRIP1LQ68CZ1 1315 aa5.75□□□□□ -1.49
NUP85-209ENST00000578987 SOS2Q07890 1332 aaPredicted RBP5.74□□□□□ -1.49
NUP85-209ENST00000578987 RGS12O14924 1447 aa5.74□□□□□ -1.49
NUP85-209ENST00000578987 SAFB2Q14151 953 aaKnown RBP eCLIP5.74□□□□□ -1.49
NUP85-209ENST00000578987 PLEKHH1Q9ULM0 1364 aa5.74□□□□□ -1.49
NUP85-209ENST00000578987 LAMC1P11047 1609 aa5.74□□□□□ -1.49
NUP85-209ENST00000578987 HFM1A2PYH4 1435 aa5.74□□□□□ -1.49
NUP85-209ENST00000578987 CABLES1Q8TDN4 633 aa5.73□□□□□ -1.49
NUP85-209ENST00000578987 FMN2Q9NZ56 1722 aa5.73□□□□□ -1.49
NUP85-209ENST00000578987 CDK12Q9NYV4 1490 aaPredicted RBP5.72□□□□□ -1.49
NUP85-209ENST00000578987 CFAP70Q5T0N1 1121 aa5.72□□□□□ -1.49
NUP85-209ENST00000578987 KRT28Q7Z3Y7 464 aa5.72□□□□□ -1.49
NUP85-209ENST00000578987 FNBP4Q8N3X1 1017 aaPredicted RBP5.72□□□□□ -1.49
NUP85-209ENST00000578987 TRPC5Q9UL62 973 aaPredicted RBP5.72□□□□□ -1.49
NUP85-209ENST00000578987 KDM2AQ9Y2K7 1162 aa5.72□□□□□ -1.49
NUP85-209ENST00000578987 COL22A1Q8NFW1 1626 aaPredicted RBP5.72□□□□□ -1.49
NUP85-209ENST00000578987 CCDC144AA2RUR9 1427 aa5.72□□□□□ -1.49
NUP85-209ENST00000578987 PTCH1Q13635 1447 aa5.72□□□□□ -1.49
NUP85-209ENST00000578987 KNDC1Q76NI1 1749 aa5.71□□□□□ -1.49
NUP85-209ENST00000578987 LMOD2Q6P5Q4 547 aa5.71□□□□□ -1.5
NUP85-209ENST00000578987 PMFBP1Q8TBY8 1022 aa5.71□□□□□ -1.5
NUP85-209ENST00000578987 NPHP3Q7Z494 1330 aa5.71□□□□□ -1.5
NUP85-209ENST00000578987 PXDNQ92626 1479 aa5.71□□□□□ -1.5
NUP85-209ENST00000578987 LRPPRCP42704 1394 aaKnown RBP5.7□□□□□ -1.5
NUP85-209ENST00000578987 NCBP3Q53F19 620 aaKnown RBP5.7□□□□□ -1.5
NUP85-209ENST00000578987 GJD4Q96KN9 370 aaPredicted RBP5.7□□□□□ -1.5
NUP85-209ENST00000578987 C14orf93Q9H972 538 aaKnown RBP5.7□□□□□ -1.5
NUP85-209ENST00000578987 ATRNO75882 1429 aa5.7□□□□□ -1.5
NUP85-209ENST00000578987 SPATA31E1Q6ZUB1 1445 aa5.7□□□□□ -1.5
NUP85-209ENST00000578987 YTHDC2Q9H6S0 1430 aaKnown RBP5.7□□□□□ -1.5
NUP85-209ENST00000578987 BCL9LQ86UU0 1499 aa5.7□□□□□ -1.5
NUP85-209ENST00000578987 ABCC11Q96J66 1382 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 CDC42BPGQ6DT37 1551 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 HAP1P54257 671 aaPredicted RBP5.69□□□□□ -1.5
NUP85-209ENST00000578987 PSME1Q06323 249 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 UNC5CLQ8IV45 518 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 PRAM1Q96QH2 718 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 HIRIP3Q9BW71 556 aaPredicted RBP5.69□□□□□ -1.5
NUP85-209ENST00000578987 POGKQ9P215 609 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 PHF8Q9UPP1 1060 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 TRAK1Q9UPV9 953 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 CCDC9Q9Y3X0 531 aaKnown RBP5.69□□□□□ -1.5
NUP85-209ENST00000578987 SPATA31A3Q5VYP0 1347 aa5.69□□□□□ -1.5
NUP85-209ENST00000578987 DHX57Q6P158 1386 aaKnown RBP5.68□□□□□ -1.5
NUP85-209ENST00000578987 ATAD2Q6PL18 1390 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 ANKRD30BQ9BXX2 1392 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.68□□□□□ -1.5
NUP85-209ENST00000578987 GLI3P10071 1580 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 USP32Q8NFA0 1604 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 FAM83GA6ND36 823 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 DCAF11Q8TEB1 546 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 MYOM2P54296 1465 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 KIF1AQ12756 1690 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 PLCH1Q4KWH8 1693 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 MINK1Q8N4C8 1332 aaPredicted RBP5.68□□□□□ -1.5
NUP85-209ENST00000578987 ABCA3Q99758 1704 aa5.68□□□□□ -1.5
NUP85-209ENST00000578987 PIK3C2GO75747 1445 aa5.67□□□□□ -1.5
NUP85-209ENST00000578987 PRAG1Q86YV5 1406 aa5.67□□□□□ -1.5
NUP85-209ENST00000578987 FAM182BQ5T319 152 aa5.67□□□□□ -1.5
NUP85-209ENST00000578987 DEFB132Q7Z7B7 95 aa5.67□□□□□ -1.5
NUP85-209ENST00000578987 SIRT1Q96EB6 747 aa5.67□□□□□ -1.5
NUP85-209ENST00000578987 ZRANB1Q9UGI0 708 aa5.67□□□□□ -1.5
NUP85-209ENST00000578987 TECPR2O15040 1411 aa5.66□□□□□ -1.5
NUP85-209ENST00000578987 RALGAPBQ86X10 1494 aa5.66□□□□□ -1.5
NUP85-209ENST00000578987 PAK3O75914 559 aaPredicted RBP5.66□□□□□ -1.5
NUP85-209ENST00000578987 SEPT12Q8IYM1 358 aa5.66□□□□□ -1.5
NUP85-209ENST00000578987 RAB3GAP2Q9H2M9 1393 aa5.66□□□□□ -1.5
NUP85-209ENST00000578987 TRPM3Q9HCF6 1732 aaPredicted RBP5.65□□□□□ -1.5
NUP85-209ENST00000578987 NWD2Q9ULI1 1742 aa5.65□□□□□ -1.5
NUP85-209ENST00000578987 SLIT2O94813 1529 aa5.65□□□□□ -1.5
NUP85-209ENST00000578987 A0A0G2JS52 829 aa5.65□□□□□ -1.5
NUP85-209ENST00000578987 MYT1Q01538 1121 aa5.65□□□□□ -1.5
NUP85-209ENST00000578987 VPS72Q15906 364 aa5.65□□□□□ -1.5
NUP85-209ENST00000578987 FAM98CQ17RN3 349 aaKnown RBP5.65□□□□□ -1.5
NUP85-209ENST00000578987 NUTM2GQ5VZR2 741 aa5.65□□□□□ -1.5
NUP85-209ENST00000578987 BTG4Q9NY30 223 aa5.65□□□□□ -1.5
NUP85-209ENST00000578987 PRR36Q9H6K5 1346 aa5.65□□□□□ -1.51
NUP85-209ENST00000578987 NRXN1Q9ULB1 1477 aa5.64□□□□□ -1.51
NUP85-209ENST00000578987 ALS2Q96Q42 1657 aa5.64□□□□□ -1.51
NUP85-209ENST00000578987 SF3B2Q13435 895 aaKnown RBP5.64□□□□□ -1.51
NUP85-209ENST00000578987 KRT27Q7Z3Y8 459 aa5.64□□□□□ -1.51
NUP85-209ENST00000578987 CCDC125Q86Z20 511 aa5.64□□□□□ -1.51
NUP85-209ENST00000578987 NGDNQ8NEJ9 315 aaKnown RBP5.64□□□□□ -1.51
NUP85-209ENST00000578987 NRAPQ86VF7 1730 aa5.64□□□□□ -1.51
NUP85-209ENST00000578987 TNS3Q68CZ2 1445 aa5.64□□□□□ -1.51
NUP85-209ENST00000578987 ARHGEF28Q8N1W1 1705 aaKnown RBP5.63□□□□□ -1.51
NUP85-209ENST00000578987 EP400Q96L91 3159 aa5.63□□□□□ -1.51
NUP85-209ENST00000578987 PSDA5PKW4 1024 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms