RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 UNC13BO14795 1591 aa12.71□□□□□ -0.37
PPP4R1-211ENST00000578875 SLIT2O94813 1529 aa12.7□□□□□ -0.38
PPP4R1-211ENST00000578875 A0A0G2JS52 829 aa12.69□□□□□ -0.38
PPP4R1-211ENST00000578875 MYT1Q01538 1121 aa12.69□□□□□ -0.38
PPP4R1-211ENST00000578875 VPS72Q15906 364 aa12.69□□□□□ -0.38
PPP4R1-211ENST00000578875 CAMKK2Q96RR4 588 aa12.69□□□□□ -0.38
PPP4R1-211ENST00000578875 MYOM3Q5VTT5 1437 aa12.69□□□□□ -0.38
PPP4R1-211ENST00000578875 ESCO1Q5FWF5 840 aa12.68□□□□□ -0.38
PPP4R1-211ENST00000578875 COL22A1Q8NFW1 1626 aaPredicted RBP12.68□□□□□ -0.38
PPP4R1-211ENST00000578875 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-211ENST00000578875 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
PPP4R1-211ENST00000578875 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
PPP4R1-211ENST00000578875 LAMC1P11047 1609 aa12.66□□□□□ -0.38
PPP4R1-211ENST00000578875 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
PPP4R1-211ENST00000578875 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
PPP4R1-211ENST00000578875 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
PPP4R1-211ENST00000578875 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
PPP4R1-211ENST00000578875 MARF1Q9Y4F3 1742 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-211ENST00000578875 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
PPP4R1-211ENST00000578875 SPHKAPQ2M3C7 1700 aa12.63□□□□□ -0.39
PPP4R1-211ENST00000578875 TRIM37O94972 964 aa12.63□□□□□ -0.39
PPP4R1-211ENST00000578875 PXDNQ92626 1479 aa12.63□□□□□ -0.39
PPP4R1-211ENST00000578875 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
PPP4R1-211ENST00000578875 NPHP3Q7Z494 1330 aa12.62□□□□□ -0.39
PPP4R1-211ENST00000578875 FAM83GA6ND36 823 aa12.62□□□□□ -0.39
PPP4R1-211ENST00000578875 KCNQ2O43526 872 aa12.62□□□□□ -0.39
PPP4R1-211ENST00000578875 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
PPP4R1-211ENST00000578875 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
PPP4R1-211ENST00000578875 ROBO2Q9HCK4 1378 aa12.61□□□□□ -0.39
PPP4R1-211ENST00000578875 APBA3O96018 575 aa12.61□□□□□ -0.39
PPP4R1-211ENST00000578875 RPRD2Q5VT52 1461 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-211ENST00000578875 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
PPP4R1-211ENST00000578875 DAPK1P53355 1430 aa12.6□□□□□ -0.39
PPP4R1-211ENST00000578875 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
PPP4R1-211ENST00000578875 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-211ENST00000578875 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-211ENST00000578875 KRT28Q7Z3Y7 464 aa12.57□□□□□ -0.4
PPP4R1-211ENST00000578875 PDGFDQ9GZP0 370 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-211ENST00000578875 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
PPP4R1-211ENST00000578875 DISP2A7MBM2 1401 aa12.56□□□□□ -0.4
PPP4R1-211ENST00000578875 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
PPP4R1-211ENST00000578875 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
PPP4R1-211ENST00000578875 ADGRL2O95490 1459 aa12.54□□□□□ -0.4
PPP4R1-211ENST00000578875 BTG4Q9NY30 223 aa12.54□□□□□ -0.4
PPP4R1-211ENST00000578875 CROCC2H7BZ55 1655 aa12.54□□□□□ -0.4
PPP4R1-211ENST00000578875 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
PPP4R1-211ENST00000578875 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
PPP4R1-211ENST00000578875 USP32Q8NFA0 1604 aa12.51□□□□□ -0.41
PPP4R1-211ENST00000578875 TNS1Q9HBL0 1735 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-211ENST00000578875 FAM196AQ6ZSG2 479 aa12.51□□□□□ -0.41
PPP4R1-211ENST00000578875 WAPLQ7Z5K2 1190 aa12.51□□□□□ -0.41
PPP4R1-211ENST00000578875 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
PPP4R1-211ENST00000578875 E9PCH4 1651 aa12.51□□□□□ -0.41
PPP4R1-211ENST00000578875 CEP350Q5VT06 3117 aa12.51□□□□□ -0.41
PPP4R1-211ENST00000578875 SYT17Q9BSW7 474 aa12.5□□□□□ -0.41
PPP4R1-211ENST00000578875 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-211ENST00000578875 LRPPRCP42704 1394 aaKnown RBP12.5□□□□□ -0.41
PPP4R1-211ENST00000578875 PTPN23Q9H3S7 1636 aa12.49□□□□□ -0.41
PPP4R1-211ENST00000578875 SPATA31A5Q5VU36 1347 aa12.49□□□□□ -0.41
PPP4R1-211ENST00000578875 SPATA31A7Q8IWB4 1347 aa12.49□□□□□ -0.41
PPP4R1-211ENST00000578875 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-211ENST00000578875 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
PPP4R1-211ENST00000578875 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
PPP4R1-211ENST00000578875 PTGER2P43116 358 aa12.48□□□□□ -0.41
PPP4R1-211ENST00000578875 FHDC1Q9C0D6 1143 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-211ENST00000578875 ANO8Q9HCE9 1232 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-211ENST00000578875 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
PPP4R1-211ENST00000578875 STK26Q9P289 416 aa12.45□□□□□ -0.42
PPP4R1-211ENST00000578875 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
PPP4R1-211ENST00000578875 NUP188Q5SRE5 1749 aa12.44□□□□□ -0.42
PPP4R1-211ENST00000578875 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
PPP4R1-211ENST00000578875 NAIPQ13075 1403 aa12.44□□□□□ -0.42
PPP4R1-211ENST00000578875 PSME1Q06323 249 aa12.43□□□□□ -0.42
PPP4R1-211ENST00000578875 UTRNP46939 3433 aa12.43□□□□□ -0.42
PPP4R1-211ENST00000578875 NUP155O75694 1391 aa12.43□□□□□ -0.42
PPP4R1-211ENST00000578875 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
PPP4R1-211ENST00000578875 FAM50AQ14320 339 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-211ENST00000578875 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
PPP4R1-211ENST00000578875 USP35Q9P2H5 1018 aa12.42□□□□□ -0.42
PPP4R1-211ENST00000578875 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
PPP4R1-211ENST00000578875 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
PPP4R1-211ENST00000578875 NRKQ7Z2Y5 1582 aa12.42□□□□□ -0.42
PPP4R1-211ENST00000578875 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
PPP4R1-211ENST00000578875 SPATA31A1Q5TZJ5 1347 aa12.41□□□□□ -0.42
PPP4R1-211ENST00000578875 RREB1Q92766 1687 aa12.41□□□□□ -0.42
PPP4R1-211ENST00000578875 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
PPP4R1-211ENST00000578875 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.42
PPP4R1-211ENST00000578875 VGFO15240 615 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-211ENST00000578875 CAPN15O75808 1086 aa12.4□□□□□ -0.42
PPP4R1-211ENST00000578875 PDE3BQ13370 1112 aa12.4□□□□□ -0.42
PPP4R1-211ENST00000578875 PROM2Q8N271 834 aa12.4□□□□□ -0.42
PPP4R1-211ENST00000578875 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
PPP4R1-211ENST00000578875 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
PPP4R1-211ENST00000578875 CHD4Q14839 1912 aa12.39□□□□□ -0.43
PPP4R1-211ENST00000578875 THSD7AQ9UPZ6 1657 aa12.39□□□□□ -0.43
PPP4R1-211ENST00000578875 CHRNA2Q15822 529 aa12.39□□□□□ -0.43
PPP4R1-211ENST00000578875 PMFBP1Q8TBY8 1022 aa12.39□□□□□ -0.43
PPP4R1-211ENST00000578875 CDC42BPGQ6DT37 1551 aa12.39□□□□□ -0.43
PPP4R1-211ENST00000578875 GPR162Q16538 588 aa12.38□□□□□ -0.43
PPP4R1-211ENST00000578875 ADGRB2O60241 1585 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms