RNA–Protein interactions for RNA: ENST00000578649.1

UBB-207, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 477 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-207ENST00000578649 PNPLA6Q8IY17 1366 aa19.02■□□□□ 0.64
UBB-207ENST00000578649 TECPR2O15040 1411 aa19.01■□□□□ 0.63
UBB-207ENST00000578649 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
UBB-207ENST00000578649 ABCC11Q96J66 1382 aa19■□□□□ 0.63
UBB-207ENST00000578649 LAMC1P11047 1609 aa19■□□□□ 0.63
UBB-207ENST00000578649 SOS2Q07890 1332 aaPredicted RBP19■□□□□ 0.63
UBB-207ENST00000578649 CDC42BPGQ6DT37 1551 aa18.99■□□□□ 0.63
UBB-207ENST00000578649 PLEKHH1Q9ULM0 1364 aa18.99■□□□□ 0.63
UBB-207ENST00000578649 C14orf93Q9H972 538 aaKnown RBP18.98■□□□□ 0.63
UBB-207ENST00000578649 YTHDC2Q9H6S0 1430 aaKnown RBP18.98■□□□□ 0.63
UBB-207ENST00000578649 NRXN1Q9ULB1 1477 aa18.97■□□□□ 0.63
UBB-207ENST00000578649 ESCO1Q5FWF5 840 aa18.97■□□□□ 0.63
UBB-207ENST00000578649 CFAP70Q5T0N1 1121 aa18.97■□□□□ 0.63
UBB-207ENST00000578649 AFF2P51816 1311 aa18.97■□□□□ 0.63
UBB-207ENST00000578649 NUTM2FA1L443 756 aa18.96■□□□□ 0.63
UBB-207ENST00000578649 MYOM2P54296 1465 aa18.96■□□□□ 0.63
UBB-207ENST00000578649 KNDC1Q76NI1 1749 aa18.95■□□□□ 0.62
UBB-207ENST00000578649 C8orf37Q96NL8 207 aa18.95■□□□□ 0.62
UBB-207ENST00000578649 FOXO3O43524 673 aa18.92■□□□□ 0.62
UBB-207ENST00000578649 ADAMTS2O95450 1211 aa18.92■□□□□ 0.62
UBB-207ENST00000578649 RXRBP28702 533 aa18.92■□□□□ 0.62
UBB-207ENST00000578649 SIRT1Q96EB6 747 aa18.92■□□□□ 0.62
UBB-207ENST00000578649 NPHP3Q7Z494 1330 aa18.92■□□□□ 0.62
UBB-207ENST00000578649 DHX57Q6P158 1386 aaKnown RBP18.92■□□□□ 0.62
UBB-207ENST00000578649 HRCP23327 699 aa18.91■□□□□ 0.62
UBB-207ENST00000578649 XPCQ01831 940 aaPredicted RBP18.91■□□□□ 0.62
UBB-207ENST00000578649 PXDNQ92626 1479 aa18.9■□□□□ 0.62
UBB-207ENST00000578649 NGLY1Q96IV0 654 aa18.88■□□□□ 0.61
UBB-207ENST00000578649 PRAM1Q96QH2 718 aa18.88■□□□□ 0.61
UBB-207ENST00000578649 QTRT2Q9H974 415 aaKnown RBP18.88■□□□□ 0.61
UBB-207ENST00000578649 KDM2AQ9Y2K7 1162 aa18.88■□□□□ 0.61
UBB-207ENST00000578649 FMN2Q9NZ56 1722 aa18.88■□□□□ 0.61
UBB-207ENST00000578649 SAFB2Q14151 953 aaKnown RBP eCLIP18.87■□□□□ 0.61
UBB-207ENST00000578649 DCAF11Q8TEB1 546 aa18.87■□□□□ 0.61
UBB-207ENST00000578649 COL22A1Q8NFW1 1626 aaPredicted RBP18.86■□□□□ 0.61
UBB-207ENST00000578649 ADGRB1O14514 1584 aa18.85■□□□□ 0.61
UBB-207ENST00000578649 CDK12Q9NYV4 1490 aaPredicted RBP18.84■□□□□ 0.61
UBB-207ENST00000578649 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.6
UBB-207ENST00000578649 FNBP4Q8N3X1 1017 aaPredicted RBP18.82■□□□□ 0.6
UBB-207ENST00000578649 UPF1Q92900 1129 aaKnown RBP eCLIP18.82■□□□□ 0.6
UBB-207ENST00000578649 POGKQ9P215 609 aa18.82■□□□□ 0.6
UBB-207ENST00000578649 USP21Q9UK80 565 aa18.82■□□□□ 0.6
UBB-207ENST00000578649 TRAK1Q9UPV9 953 aa18.82■□□□□ 0.6
UBB-207ENST00000578649 DLC1Q96QB1 1528 aa18.82■□□□□ 0.6
UBB-207ENST00000578649 KRT28Q7Z3Y7 464 aa18.81■□□□□ 0.6
UBB-207ENST00000578649 PHF8Q9UPP1 1060 aa18.81■□□□□ 0.6
UBB-207ENST00000578649 RGS12O14924 1447 aa18.81■□□□□ 0.6
UBB-207ENST00000578649 RGPD8O14715 1765 aaPredicted RBP18.81■□□□□ 0.6
UBB-207ENST00000578649 SPATA31A3Q5VYP0 1347 aa18.8■□□□□ 0.6
UBB-207ENST00000578649 KIF1AQ12756 1690 aa18.8■□□□□ 0.6
UBB-207ENST00000578649 STAC3Q96MF2 364 aa18.79■□□□□ 0.6
UBB-207ENST00000578649 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
UBB-207ENST00000578649 TRPC5Q9UL62 973 aaPredicted RBP18.77■□□□□ 0.6
UBB-207ENST00000578649 MINK1Q8N4C8 1332 aaPredicted RBP18.76■□□□□ 0.59
UBB-207ENST00000578649 USP32Q8NFA0 1604 aa18.76■□□□□ 0.59
UBB-207ENST00000578649 BCL9LQ86UU0 1499 aa18.76■□□□□ 0.59
UBB-207ENST00000578649 ADGRB2O60241 1585 aa18.76■□□□□ 0.59
UBB-207ENST00000578649 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
UBB-207ENST00000578649 ATRNO75882 1429 aa18.74■□□□□ 0.59
UBB-207ENST00000578649 ANKARQ7Z5J8 1434 aa18.74■□□□□ 0.59
UBB-207ENST00000578649 PSME1Q06323 249 aa18.74■□□□□ 0.59
UBB-207ENST00000578649 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
UBB-207ENST00000578649 TNS3Q68CZ2 1445 aa18.74■□□□□ 0.59
UBB-207ENST00000578649 PRR36Q9H6K5 1346 aa18.73■□□□□ 0.59
UBB-207ENST00000578649 CABLES1Q8TDN4 633 aa18.72■□□□□ 0.59
UBB-207ENST00000578649 SBNO1A3KN83 1393 aa18.71■□□□□ 0.59
UBB-207ENST00000578649 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.59
UBB-207ENST00000578649 PLEKHG5O94827 1062 aa18.71■□□□□ 0.59
UBB-207ENST00000578649 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
UBB-207ENST00000578649 SLIT2O94813 1529 aa18.69■□□□□ 0.58
UBB-207ENST00000578649 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
UBB-207ENST00000578649 HAP1P54257 671 aaPredicted RBP18.68■□□□□ 0.58
UBB-207ENST00000578649 UNC5CLQ8IV45 518 aa18.68■□□□□ 0.58
UBB-207ENST00000578649 GJD4Q96KN9 370 aaPredicted RBP18.68■□□□□ 0.58
UBB-207ENST00000578649 ARHGEF28Q8N1W1 1705 aaKnown RBP18.68■□□□□ 0.58
UBB-207ENST00000578649 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
UBB-207ENST00000578649 ARHGEF10O15013 1369 aa18.67■□□□□ 0.58
UBB-207ENST00000578649 NBPF1Q3BBV0 1214 aa18.65■□□□□ 0.58
UBB-207ENST00000578649 GPRASP1Q5JY77 1395 aa18.65■□□□□ 0.58
UBB-207ENST00000578649 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.64■□□□□ 0.57
UBB-207ENST00000578649 TRPM3Q9HCF6 1732 aaPredicted RBP18.64■□□□□ 0.57
UBB-207ENST00000578649 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
UBB-207ENST00000578649 NGDNQ8NEJ9 315 aaKnown RBP18.63■□□□□ 0.57
UBB-207ENST00000578649 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
UBB-207ENST00000578649 RALGAPBQ86X10 1494 aa18.63■□□□□ 0.57
UBB-207ENST00000578649 ABCA3Q99758 1704 aa18.63■□□□□ 0.57
UBB-207ENST00000578649 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
UBB-207ENST00000578649 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
UBB-207ENST00000578649 ATP7BP35670 1465 aa18.62■□□□□ 0.57
UBB-207ENST00000578649 KIAA1210Q9ULL0 1709 aa18.62■□□□□ 0.57
UBB-207ENST00000578649 GLI3P10071 1580 aa18.61■□□□□ 0.57
UBB-207ENST00000578649 EP400Q96L91 3159 aa18.61■□□□□ 0.57
UBB-207ENST00000578649 ALS2Q96Q42 1657 aa18.6■□□□□ 0.57
UBB-207ENST00000578649 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
UBB-207ENST00000578649 VPS72Q15906 364 aa18.59■□□□□ 0.57
UBB-207ENST00000578649 PLCH1Q4KWH8 1693 aa18.59■□□□□ 0.57
UBB-207ENST00000578649 L3MBTL2Q969R5 705 aa18.58■□□□□ 0.56
UBB-207ENST00000578649 SIN3AQ96ST3 1273 aa18.58■□□□□ 0.56
UBB-207ENST00000578649 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
UBB-207ENST00000578649 NWD2Q9ULI1 1742 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms