RNA–Protein interactions for RNA: ENST00000578649.1

UBB-207, Transcript of ubiquitin B, humanhuman

TSL 5

Gene UBB, Length 477 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-207ENST00000578649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.15■□□□□ 0.982e-65■■■□□ 19
UBB-207ENST00000578649 FTOQ9C0B1 505 aaKnown RBP eCLIP14.85□□□□□ -0.035e-61■□□□□ 8.1
UBB-207ENST00000578649 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.861e-48■■■■■ 211.6
UBB-207ENST00000578649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.87e-45■■■□□ 14.9
UBB-207ENST00000578649 DDX3XO00571 662 aaKnown RBP eCLIP12.98□□□□□ -0.339e-44■■□□□ 13.7
UBB-207ENST00000578649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.15□□□□□ -0.146e-33■□□□□ 8.5
UBB-207ENST00000578649 PABPC4Q13310 644 aaKnown RBP eCLIP15.62■□□□□ 0.091e-23■■□□□ 11.8
UBB-207ENST00000578649 EIF3HO15372 352 aaKnown RBP eCLIP12.31□□□□□ -0.449e-21■■□□□ 12.7
UBB-207ENST00000578649 TRA2AQ13595 282 aaKnown RBP eCLIP12.72□□□□□ -0.371e-20■□□□□ 10.4
UBB-207ENST00000578649 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.292e-19■■□□□ 13.2
UBB-207ENST00000578649 NCBP2P52298 156 aaKnown RBP eCLIP11.65□□□□□ -0.542e-16■■■□□ 14.9
UBB-207ENST00000578649 RPS3P23396 243 aaKnown RBP eCLIP12.33□□□□□ -0.442e-15■■■■□ 20.4
UBB-207ENST00000578649 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.383e-15■■□□□ 13.5
UBB-207ENST00000578649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.98■□□□□ 0.157e-15■■■□□ 15.6
UBB-207ENST00000578649 GTF2F1P35269 517 aaKnown RBP eCLIP14.5□□□□□ -0.091e-13■■■■■ 55.2
UBB-207ENST00000578649 LARP4Q71RC2 724 aaKnown RBP eCLIP11.68□□□□□ -0.544e-13■■■■■ 31.1
UBB-207ENST00000578649 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.08□□□□□ -0.168e-12■■■■■ 37
UBB-207ENST00000578649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.98■□□□□ 0.791e-11■□□□□ 10.5
UBB-207ENST00000578649 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.74□□□□□ -0.054e-11■■□□□ 12.4
UBB-207ENST00000578649 NOLC1Q14978 699 aaKnown RBP eCLIP14.05□□□□□ -0.162e-10■■■■□ 22.8
UBB-207ENST00000578649 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.67□□□□□ -0.541e-9■■■□□ 16.3
UBB-207ENST00000578649 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.323e-9■■□□□ 14.5
UBB-207ENST00000578649 RBM15Q96T37 977 aaKnown RBP eCLIP12.89□□□□□ -0.353e-9■□□□□ 9.5
UBB-207ENST00000578649 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.97□□□□□ -0.655e-9■□□□□ 11
UBB-207ENST00000578649 KHSRPQ92945 711 aaKnown RBP eCLIP14.52□□□□□ -0.091e-8■□□□□ 11.3
UBB-207ENST00000578649 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.02□□□□□ -0.492e-8■□□□□ 9.5
UBB-207ENST00000578649 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.13□□□□□ -0.472e-8■■■■■ 28.3
UBB-207ENST00000578649 G3BP1Q13283 466 aaKnown RBP eCLIP15.88■□□□□ 0.134e-8■■□□□ 14.3
UBB-207ENST00000578649 PRPF4O43172 522 aaKnown RBP eCLIP12.19□□□□□ -0.468e-8■■■■□ 22.7
UBB-207ENST00000578649 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.154e-7■■■■■ 40.1
UBB-207ENST00000578649 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.36□□□□□ -0.278e-7■■■■■ 40.7
UBB-207ENST00000578649 METAP2P50579 478 aaKnown RBP eCLIP14.68□□□□□ -0.061e-6■■□□□ 11.6
UBB-207ENST00000578649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■■■ 52.3
UBB-207ENST00000578649 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.923e-6■□□□□ 11.2
UBB-207ENST00000578649 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.893e-6■■□□□ 13.3
UBB-207ENST00000578649 EFTUD2Q15029 972 aaKnown RBP eCLIP12.07□□□□□ -0.483e-6■■■■■ 41.9
Retrieved 36 of 36 RNA–protein pairs in 12.9 ms