RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PPP6R1Q9UPN7 881 aa12.3□□□□□ -0.44
CDK5RAP3-208ENST00000578525 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
CDK5RAP3-208ENST00000578525 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
CDK5RAP3-208ENST00000578525 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
CDK5RAP3-208ENST00000578525 CCDC146Q8IYE0 955 aa12.29□□□□□ -0.44
CDK5RAP3-208ENST00000578525 SLC12A5Q9H2X9 1139 aa12.29□□□□□ -0.44
CDK5RAP3-208ENST00000578525 PTPRMP28827 1452 aa12.28□□□□□ -0.44
CDK5RAP3-208ENST00000578525 TSPOAP1O95153 1857 aa12.28□□□□□ -0.44
CDK5RAP3-208ENST00000578525 MSH5O43196 834 aa12.28□□□□□ -0.44
CDK5RAP3-208ENST00000578525 TRMT2AQ8IZ69 625 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-208ENST00000578525 CRBNQ96SW2 442 aa12.28□□□□□ -0.44
CDK5RAP3-208ENST00000578525 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
CDK5RAP3-208ENST00000578525 SPATA31D1Q6ZQQ2 1576 aa12.27□□□□□ -0.44
CDK5RAP3-208ENST00000578525 APAF1O14727 1248 aa12.27□□□□□ -0.45
CDK5RAP3-208ENST00000578525 ALKQ9UM73 1620 aa12.26□□□□□ -0.45
CDK5RAP3-208ENST00000578525 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-208ENST00000578525 PLIN1O60240 522 aa12.26□□□□□ -0.45
CDK5RAP3-208ENST00000578525 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-208ENST00000578525 YTHDC2Q9H6S0 1430 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-208ENST00000578525 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-208ENST00000578525 IQSEC2Q5JU85 1478 aa12.26□□□□□ -0.45
CDK5RAP3-208ENST00000578525 ARHGEF40Q8TER5 1519 aa12.26□□□□□ -0.45
CDK5RAP3-208ENST00000578525 E9PSI1 815 aa12.25□□□□□ -0.45
CDK5RAP3-208ENST00000578525 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
CDK5RAP3-208ENST00000578525 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
CDK5RAP3-208ENST00000578525 DLC1Q96QB1 1528 aa12.25□□□□□ -0.45
CDK5RAP3-208ENST00000578525 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
CDK5RAP3-208ENST00000578525 FBXO31Q5XUX0 539 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-208ENST00000578525 A2ML1A8K2U0 1454 aa12.23□□□□□ -0.45
CDK5RAP3-208ENST00000578525 ABCC11Q96J66 1382 aa12.23□□□□□ -0.45
CDK5RAP3-208ENST00000578525 RUNDC1Q96C34 613 aa12.23□□□□□ -0.45
CDK5RAP3-208ENST00000578525 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
CDK5RAP3-208ENST00000578525 STK26Q9P289 416 aa12.23□□□□□ -0.45
CDK5RAP3-208ENST00000578525 MED14O60244 1454 aa12.22□□□□□ -0.45
CDK5RAP3-208ENST00000578525 MS4A1P11836 297 aa12.22□□□□□ -0.45
CDK5RAP3-208ENST00000578525 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
CDK5RAP3-208ENST00000578525 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
CDK5RAP3-208ENST00000578525 A0A1W2PP64 1363 aa12.21□□□□□ -0.45
CDK5RAP3-208ENST00000578525 SETD1AO15047 1707 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-208ENST00000578525 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-208ENST00000578525 C20orf194Q5TEA3 1177 aa12.21□□□□□ -0.45
CDK5RAP3-208ENST00000578525 STAG3Q9UJ98 1225 aa12.21□□□□□ -0.45
CDK5RAP3-208ENST00000578525 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 MTHFSP49914 203 aa12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 SRPK2P78362 688 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 SAFB2Q14151 953 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 POGKQ9P215 609 aa12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 ADGRB2O60241 1585 aa12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 KIF13AQ9H1H9 1805 aa12.2□□□□□ -0.46
CDK5RAP3-208ENST00000578525 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-208ENST00000578525 WWC1Q8IX03 1113 aa12.19□□□□□ -0.46
CDK5RAP3-208ENST00000578525 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
CDK5RAP3-208ENST00000578525 CD163L1Q9NR16 1453 aa12.19□□□□□ -0.46
CDK5RAP3-208ENST00000578525 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
CDK5RAP3-208ENST00000578525 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
CDK5RAP3-208ENST00000578525 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-208ENST00000578525 COL3A1P02461 1466 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-208ENST00000578525 NLRP1Q9C000 1473 aa12.17□□□□□ -0.46
CDK5RAP3-208ENST00000578525 ANP32AP39687 249 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-208ENST00000578525 CCDC27Q2M243 656 aa12.17□□□□□ -0.46
CDK5RAP3-208ENST00000578525 CENPQQ7L2Z9 268 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-208ENST00000578525 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
CDK5RAP3-208ENST00000578525 TCP11L2Q8N4U5 519 aa12.17□□□□□ -0.46
CDK5RAP3-208ENST00000578525 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
CDK5RAP3-208ENST00000578525 NRXN3Q9Y4C0 1643 aa12.16□□□□□ -0.46
CDK5RAP3-208ENST00000578525 HDGFL2Q7Z4V5 671 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-208ENST00000578525 KNDC1Q76NI1 1749 aa12.16□□□□□ -0.46
CDK5RAP3-208ENST00000578525 ATP7BP35670 1465 aa12.15□□□□□ -0.46
CDK5RAP3-208ENST00000578525 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDK5RAP3-208ENST00000578525 CDK19Q9BWU1 502 aa12.15□□□□□ -0.46
CDK5RAP3-208ENST00000578525 SENP3Q9H4L4 574 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-208ENST00000578525 PDE4AP27815 886 aa12.14□□□□□ -0.47
CDK5RAP3-208ENST00000578525 NOP58Q9Y2X3 529 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-208ENST00000578525 BCAR3O75815 825 aa12.13□□□□□ -0.47
CDK5RAP3-208ENST00000578525 U2AF1L5P0DN76 240 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-208ENST00000578525 U2AF1Q01081 240 aaKnown RBP eCLIP12.13□□□□□ -0.477e-10■□□□□ 10.2
CDK5RAP3-208ENST00000578525 MLECQ14165 292 aa12.13□□□□□ -0.47
CDK5RAP3-208ENST00000578525 PDE3AQ14432 1141 aa12.13□□□□□ -0.47
CDK5RAP3-208ENST00000578525 BACH2Q9BYV9 841 aa12.13□□□□□ -0.47
CDK5RAP3-208ENST00000578525 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
CDK5RAP3-208ENST00000578525 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-208ENST00000578525 FYB1O15117 783 aa12.12□□□□□ -0.47
CDK5RAP3-208ENST00000578525 IPO9Q96P70 1041 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-208ENST00000578525 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
CDK5RAP3-208ENST00000578525 CDC42BPGQ6DT37 1551 aa12.12□□□□□ -0.47
CDK5RAP3-208ENST00000578525 TNRQ92752 1358 aa12.11□□□□□ -0.47
CDK5RAP3-208ENST00000578525 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
CDK5RAP3-208ENST00000578525 ESF1Q9H501 851 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-208ENST00000578525 MYH16Q9H6N6 1097 aa12.11□□□□□ -0.47
CDK5RAP3-208ENST00000578525 CPS1P31327 1500 aa12.11□□□□□ -0.47
CDK5RAP3-208ENST00000578525 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
CDK5RAP3-208ENST00000578525 TECPR2O15040 1411 aa12.1□□□□□ -0.47
CDK5RAP3-208ENST00000578525 FAM135BQ49AJ0 1406 aa12.1□□□□□ -0.47
CDK5RAP3-208ENST00000578525 PNPLA6Q8IY17 1366 aa12.09□□□□□ -0.47
CDK5RAP3-208ENST00000578525 CANXP27824 592 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-208ENST00000578525 HDGFP51858 240 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-208ENST00000578525 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-208ENST00000578525 SIRT1Q96EB6 747 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms