RNA–Protein interactions for RNA: ENST00000578476.5

EIF4A1-208, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-208ENST00000578476 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
EIF4A1-208ENST00000578476 EIF3AQ14152 1382 aaKnown RBP23.53■■□□□ 1.36
EIF4A1-208ENST00000578476 UBAP1LF5GYI3 381 aa23.53■■□□□ 1.36
EIF4A1-208ENST00000578476 TOM1O60784 492 aa23.53■■□□□ 1.36
EIF4A1-208ENST00000578476 CADPS2Q86UW7 1296 aa23.52■■□□□ 1.36
EIF4A1-208ENST00000578476 MINK1Q8N4C8 1332 aaPredicted RBP23.52■■□□□ 1.36
EIF4A1-208ENST00000578476 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.51■■□□□ 1.35
EIF4A1-208ENST00000578476 DCCP43146 1447 aa23.5■■□□□ 1.35
EIF4A1-208ENST00000578476 NALCNQ8IZF0 1738 aa23.5■■□□□ 1.35
EIF4A1-208ENST00000578476 HIRIP3Q9BW71 556 aaPredicted RBP23.5■■□□□ 1.35
EIF4A1-208ENST00000578476 USP47Q96K76 1375 aa23.47■■□□□ 1.35
EIF4A1-208ENST00000578476 SLAIN2Q9P270 581 aa23.46■■□□□ 1.35
EIF4A1-208ENST00000578476 ST20-MTHFSA0A0A6YYL1 179 aa23.45■■□□□ 1.34
EIF4A1-208ENST00000578476 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
EIF4A1-208ENST00000578476 ZEB1P37275 1124 aaPredicted RBP23.44■■□□□ 1.34
EIF4A1-208ENST00000578476 WASLO00401 505 aaPredicted RBP23.43■■□□□ 1.34
EIF4A1-208ENST00000578476 PIP4K2BP78356 416 aa23.43■■□□□ 1.34
EIF4A1-208ENST00000578476 ADGRB2O60241 1585 aa23.42■■□□□ 1.34
EIF4A1-208ENST00000578476 MST1RQ04912 1400 aa23.42■■□□□ 1.34
EIF4A1-208ENST00000578476 SCAF1Q9H7N4 1312 aaKnown RBP23.41■■□□□ 1.34
EIF4A1-208ENST00000578476 NUTM2FA1L443 756 aa23.41■■□□□ 1.34
EIF4A1-208ENST00000578476 FBXO41Q8TF61 875 aa23.41■■□□□ 1.34
EIF4A1-208ENST00000578476 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
EIF4A1-208ENST00000578476 EIF4G2P78344 907 aaKnown RBP eCLIP23.4■■□□□ 1.346e-7■□□□□ 9.9
EIF4A1-208ENST00000578476 CDK19Q9BWU1 502 aa23.4■■□□□ 1.34
EIF4A1-208ENST00000578476 SBNO2Q9Y2G9 1366 aa23.39■■□□□ 1.33
EIF4A1-208ENST00000578476 C1orf167Q5SNV9 1468 aa23.38■■□□□ 1.33
EIF4A1-208ENST00000578476 EVC2Q86UK5 1308 aa23.37■■□□□ 1.33
EIF4A1-208ENST00000578476 TESK2Q96S53 571 aa23.37■■□□□ 1.33
EIF4A1-208ENST00000578476 HSPA5P11021 654 aaKnown RBP23.36■■□□□ 1.33
EIF4A1-208ENST00000578476 SLC24A1O60721 1099 aa23.35■■□□□ 1.33
EIF4A1-208ENST00000578476 SRPK2P78362 688 aaKnown RBP23.35■■□□□ 1.33
EIF4A1-208ENST00000578476 FMN2Q9NZ56 1722 aa23.35■■□□□ 1.33
EIF4A1-208ENST00000578476 ESCO1Q5FWF5 840 aa23.34■■□□□ 1.33
EIF4A1-208ENST00000578476 ORAI2Q96SN7 254 aa23.34■■□□□ 1.33
EIF4A1-208ENST00000578476 CABP2Q9NPB3 220 aa23.34■■□□□ 1.33
EIF4A1-208ENST00000578476 BRINP3Q76B58 766 aa23.33■■□□□ 1.33
EIF4A1-208ENST00000578476 TULP4Q9NRJ4 1543 aa23.33■■□□□ 1.32
EIF4A1-208ENST00000578476 ANKARQ7Z5J8 1434 aa23.33■■□□□ 1.32
EIF4A1-208ENST00000578476 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.32
EIF4A1-208ENST00000578476 NUDT16Q96DE0 195 aaKnown RBP23.32■■□□□ 1.32
EIF4A1-208ENST00000578476 ROBO1Q9Y6N7 1651 aa23.29■■□□□ 1.32
EIF4A1-208ENST00000578476 TMF1P82094 1093 aa23.29■■□□□ 1.32
EIF4A1-208ENST00000578476 CCDC61Q9Y6R9 512 aa23.28■■□□□ 1.32
EIF4A1-208ENST00000578476 USP32Q8NFA0 1604 aa23.27■■□□□ 1.32
EIF4A1-208ENST00000578476 PHF8Q9UPP1 1060 aa23.27■■□□□ 1.32
EIF4A1-208ENST00000578476 ATP7BP35670 1465 aa23.27■■□□□ 1.32
EIF4A1-208ENST00000578476 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
EIF4A1-208ENST00000578476 PUS7Q96PZ0 661 aaKnown RBP23.25■■□□□ 1.31
EIF4A1-208ENST00000578476 DISP3Q9P2K9 1392 aa23.25■■□□□ 1.31
EIF4A1-208ENST00000578476 FOXO3O43524 673 aa23.23■■□□□ 1.31
EIF4A1-208ENST00000578476 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
EIF4A1-208ENST00000578476 DDX17Q92841 729 aaKnown RBP23.23■■□□□ 1.31
EIF4A1-208ENST00000578476 ATAD2Q6PL18 1390 aa23.23■■□□□ 1.31
EIF4A1-208ENST00000578476 RGPD8O14715 1765 aaPredicted RBP23.22■■□□□ 1.31
EIF4A1-208ENST00000578476 HSPA1LP34931 641 aa23.22■■□□□ 1.31
EIF4A1-208ENST00000578476 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
EIF4A1-208ENST00000578476 ILDR1Q86SU0 546 aaPredicted RBP23.21■■□□□ 1.31
EIF4A1-208ENST00000578476 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
EIF4A1-208ENST00000578476 PPIP5K1Q6PFW1 1433 aa23.21■■□□□ 1.31
EIF4A1-208ENST00000578476 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
EIF4A1-208ENST00000578476 NGDNQ8NEJ9 315 aaKnown RBP23.2■■□□□ 1.3
EIF4A1-208ENST00000578476 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
EIF4A1-208ENST00000578476 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
EIF4A1-208ENST00000578476 PSME1Q06323 249 aa23.17■■□□□ 1.3
EIF4A1-208ENST00000578476 TMC1Q8TDI8 760 aa23.17■■□□□ 1.3
EIF4A1-208ENST00000578476 AHDC1Q5TGY3 1603 aaPredicted RBP23.17■■□□□ 1.3
EIF4A1-208ENST00000578476 TOPAZ1Q8N9V7 1692 aa23.16■■□□□ 1.3
EIF4A1-208ENST00000578476 ACEP12821 1306 aa23.16■■□□□ 1.3
EIF4A1-208ENST00000578476 XPCQ01831 940 aaPredicted RBP23.16■■□□□ 1.3
EIF4A1-208ENST00000578476 KRT28Q7Z3Y7 464 aa23.16■■□□□ 1.3
EIF4A1-208ENST00000578476 SOS2Q07890 1332 aaPredicted RBP23.15■■□□□ 1.3
EIF4A1-208ENST00000578476 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
EIF4A1-208ENST00000578476 C11orf95C9JLR9 678 aaPredicted RBP23.14■■□□□ 1.29
EIF4A1-208ENST00000578476 POLR3GLQ9BT43 218 aa23.14■■□□□ 1.29
EIF4A1-208ENST00000578476 SLC12A5Q9H2X9 1139 aa23.14■■□□□ 1.29
EIF4A1-208ENST00000578476 POLR3AO14802 1390 aaPredicted RBP23.14■■□□□ 1.29
EIF4A1-208ENST00000578476 PHLPP1O60346 1717 aa23.13■■□□□ 1.29
EIF4A1-208ENST00000578476 PXDNQ92626 1479 aa23.11■■□□□ 1.29
EIF4A1-208ENST00000578476 LRRC59Q96AG4 307 aaKnown RBP23.11■■□□□ 1.29
EIF4A1-208ENST00000578476 NINLQ9Y2I6 1382 aa23.11■■□□□ 1.29
EIF4A1-208ENST00000578476 COL16A1Q07092 1604 aaPredicted RBP23.09■■□□□ 1.29
EIF4A1-208ENST00000578476 ZNF692Q9BU19 519 aaPredicted RBP23.09■■□□□ 1.29
EIF4A1-208ENST00000578476 HDGFL2Q7Z4V5 671 aaPredicted RBP23.08■■□□□ 1.29
EIF4A1-208ENST00000578476 TERF2IPQ9NYB0 399 aa23.08■■□□□ 1.29
EIF4A1-208ENST00000578476 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.28
EIF4A1-208ENST00000578476 CPSF1Q10570 1443 aaKnown RBP23.07■■□□□ 1.28
EIF4A1-208ENST00000578476 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
EIF4A1-208ENST00000578476 PAK3O75914 559 aaPredicted RBP23.06■■□□□ 1.28
EIF4A1-208ENST00000578476 SPATA31A3Q5VYP0 1347 aa23.05■■□□□ 1.28
EIF4A1-208ENST00000578476 CD163L1Q9NR16 1453 aa23.05■■□□□ 1.28
EIF4A1-208ENST00000578476 KTN1Q86UP2 1357 aaKnown RBP23.04■■□□□ 1.28
EIF4A1-208ENST00000578476 JCADQ9P266 1359 aa23.04■■□□□ 1.28
EIF4A1-208ENST00000578476 USP6P35125 1406 aa23.04■■□□□ 1.28
EIF4A1-208ENST00000578476 LMOD2Q6P5Q4 547 aa23.03■■□□□ 1.28
EIF4A1-208ENST00000578476 A0A1W2PP64 1363 aa23.02■■□□□ 1.28
EIF4A1-208ENST00000578476 BRD4O60885 1362 aaPredicted RBP23.02■■□□□ 1.28
EIF4A1-208ENST00000578476 CCDC7Q96M83 1385 aa23.02■■□□□ 1.28
EIF4A1-208ENST00000578476 TNS3Q68CZ2 1445 aa23.02■■□□□ 1.28
EIF4A1-208ENST00000578476 WASHC2AQ641Q2 1341 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms