RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
CTC1-203ENST00000578240 TOPAZ1Q8N9V7 1692 aa18.2■□□□□ 0.5
CTC1-203ENST00000578240 PTCH1Q13635 1447 aa18.2■□□□□ 0.5
CTC1-203ENST00000578240 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
CTC1-203ENST00000578240 NPHP4O75161 1426 aaPredicted RBP18.18■□□□□ 0.5
CTC1-203ENST00000578240 RGPD8O14715 1765 aaPredicted RBP18.18■□□□□ 0.5
CTC1-203ENST00000578240 USP32Q8NFA0 1604 aa18.17■□□□□ 0.5
CTC1-203ENST00000578240 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTC1-203ENST00000578240 TBX22Q9Y458 520 aa18.16■□□□□ 0.5
CTC1-203ENST00000578240 ANKLE2Q86XL3 938 aa18.15■□□□□ 0.5
CTC1-203ENST00000578240 AKAP12Q02952 1782 aa18.15■□□□□ 0.5
CTC1-203ENST00000578240 PIK3R4Q99570 1358 aa18.15■□□□□ 0.5
CTC1-203ENST00000578240 WAPLQ7Z5K2 1190 aa18.15■□□□□ 0.5
CTC1-203ENST00000578240 BCANQ96GW7 911 aa18.15■□□□□ 0.5
CTC1-203ENST00000578240 LTBP4Q8N2S1 1624 aa18.14■□□□□ 0.5
CTC1-203ENST00000578240 ITSN1Q15811 1721 aa18.14■□□□□ 0.49
CTC1-203ENST00000578240 MINK1Q8N4C8 1332 aaPredicted RBP18.14■□□□□ 0.49
CTC1-203ENST00000578240 FMN2Q9NZ56 1722 aa18.13■□□□□ 0.49
CTC1-203ENST00000578240 CDCA8Q53HL2 280 aa18.12■□□□□ 0.49
CTC1-203ENST00000578240 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
CTC1-203ENST00000578240 ANKRD26Q9UPS8 1709 aa18.12■□□□□ 0.49
CTC1-203ENST00000578240 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
CTC1-203ENST00000578240 SIRT1Q96EB6 747 aa18.12■□□□□ 0.49
CTC1-203ENST00000578240 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
CTC1-203ENST00000578240 POGKQ9P215 609 aa18.11■□□□□ 0.49
CTC1-203ENST00000578240 CD163L1Q9NR16 1453 aa18.11■□□□□ 0.49
CTC1-203ENST00000578240 KIF20BQ96Q89 1820 aa18.11■□□□□ 0.49
CTC1-203ENST00000578240 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
CTC1-203ENST00000578240 ATP7BP35670 1465 aa18.1■□□□□ 0.49
CTC1-203ENST00000578240 IQSEC2Q5JU85 1478 aa18.1■□□□□ 0.49
CTC1-203ENST00000578240 ZNF335Q9H4Z2 1342 aaPredicted RBP18.1■□□□□ 0.49
CTC1-203ENST00000578240 XIRP1Q702N8 1843 aaKnown RBP18.1■□□□□ 0.49
CTC1-203ENST00000578240 ANP32CO43423 234 aa18.09■□□□□ 0.49
CTC1-203ENST00000578240 PRKRIP1Q9H875 184 aaPredicted RBP18.09■□□□□ 0.49
CTC1-203ENST00000578240 PANK3Q9H999 370 aa18.09■□□□□ 0.49
CTC1-203ENST00000578240 AMOTL2Q9Y2J4 779 aa18.09■□□□□ 0.49
CTC1-203ENST00000578240 PUS7Q96PZ0 661 aaKnown RBP18.08■□□□□ 0.48
CTC1-203ENST00000578240 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
CTC1-203ENST00000578240 CDC42BPGQ6DT37 1551 aa18.07■□□□□ 0.48
CTC1-203ENST00000578240 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
CTC1-203ENST00000578240 KCNA6P17658 529 aa18.06■□□□□ 0.48
CTC1-203ENST00000578240 ATAD2Q6PL18 1390 aa18.05■□□□□ 0.48
CTC1-203ENST00000578240 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
CTC1-203ENST00000578240 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
CTC1-203ENST00000578240 NKTRP30414 1462 aaKnown RBP18.03■□□□□ 0.48
CTC1-203ENST00000578240 ANKRD36BQ8N2N9 1353 aa18.03■□□□□ 0.48
CTC1-203ENST00000578240 NINLQ9Y2I6 1382 aa18.03■□□□□ 0.48
CTC1-203ENST00000578240 CARD14Q9BXL6 1004 aa18.03■□□□□ 0.48
CTC1-203ENST00000578240 SLC12A5Q9H2X9 1139 aa18.03■□□□□ 0.48
CTC1-203ENST00000578240 A0A1W2PP64 1363 aa18.02■□□□□ 0.48
CTC1-203ENST00000578240 CCER2I3L3R5 266 aa18.02■□□□□ 0.47
CTC1-203ENST00000578240 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
CTC1-203ENST00000578240 PRR36Q9H6K5 1346 aa18.01■□□□□ 0.47
CTC1-203ENST00000578240 WASLO00401 505 aaPredicted RBP18.01■□□□□ 0.47
CTC1-203ENST00000578240 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
CTC1-203ENST00000578240 CCDC184Q52MB2 194 aa18■□□□□ 0.47
CTC1-203ENST00000578240 AMER1Q5JTC6 1135 aaPredicted RBP18■□□□□ 0.47
CTC1-203ENST00000578240 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
CTC1-203ENST00000578240 KTN1Q86UP2 1357 aaKnown RBP17.98■□□□□ 0.47
CTC1-203ENST00000578240 PPIP5K1Q6PFW1 1433 aa17.98■□□□□ 0.47
CTC1-203ENST00000578240 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
CTC1-203ENST00000578240 CPSF1Q10570 1443 aaKnown RBP17.97■□□□□ 0.47
CTC1-203ENST00000578240 TMC1Q8TDI8 760 aa17.96■□□□□ 0.47
CTC1-203ENST00000578240 CNGB1Q14028 1251 aaPredicted RBP17.96■□□□□ 0.47
CTC1-203ENST00000578240 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
CTC1-203ENST00000578240 CC2D1BQ5T0F9 858 aaKnown RBP17.94■□□□□ 0.46
CTC1-203ENST00000578240 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
CTC1-203ENST00000578240 KNSTRNQ9Y448 316 aa17.93■□□□□ 0.46
CTC1-203ENST00000578240 ANKARQ7Z5J8 1434 aa17.93■□□□□ 0.46
CTC1-203ENST00000578240 NUDT16Q96DE0 195 aaKnown RBP17.92■□□□□ 0.46
CTC1-203ENST00000578240 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
CTC1-203ENST00000578240 SHPRHQ149N8 1683 aa17.92■□□□□ 0.46
CTC1-203ENST00000578240 RALBP1Q15311 655 aa17.91■□□□□ 0.46
CTC1-203ENST00000578240 CABP1Q9NZU7 370 aa17.91■□□□□ 0.46
CTC1-203ENST00000578240 USP54Q70EL1 1684 aa17.91■□□□□ 0.46
CTC1-203ENST00000578240 RBM33Q96EV2 1170 aaKnown RBP17.9■□□□□ 0.46
CTC1-203ENST00000578240 MAP2P11137 1827 aaKnown RBP17.9■□□□□ 0.46
CTC1-203ENST00000578240 PIK3C2AO00443 1686 aa17.89■□□□□ 0.45
CTC1-203ENST00000578240 BRD4O60885 1362 aaPredicted RBP17.88■□□□□ 0.45
CTC1-203ENST00000578240 EDC4Q6P2E9 1401 aaKnown RBP17.88■□□□□ 0.45
CTC1-203ENST00000578240 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
CTC1-203ENST00000578240 NSD2O96028 1365 aa17.87■□□□□ 0.45
CTC1-203ENST00000578240 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
CTC1-203ENST00000578240 LRRC7Q96NW7 1537 aa17.86■□□□□ 0.45
CTC1-203ENST00000578240 KIF1AQ12756 1690 aa17.86■□□□□ 0.45
CTC1-203ENST00000578240 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
CTC1-203ENST00000578240 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
CTC1-203ENST00000578240 TRPM3Q9HCF6 1732 aaPredicted RBP17.85■□□□□ 0.45
CTC1-203ENST00000578240 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
CTC1-203ENST00000578240 POLR3AO14802 1390 aaPredicted RBP17.85■□□□□ 0.45
CTC1-203ENST00000578240 CGNL1Q0VF96 1302 aa17.85■□□□□ 0.45
CTC1-203ENST00000578240 TOM1O60784 492 aa17.85■□□□□ 0.45
CTC1-203ENST00000578240 MRS2Q9HD23 443 aa17.85■□□□□ 0.45
CTC1-203ENST00000578240 USP6P35125 1406 aa17.84■□□□□ 0.45
CTC1-203ENST00000578240 TMEM94Q12767 1356 aa17.84■□□□□ 0.45
CTC1-203ENST00000578240 NLRP13Q86W25 1043 aa17.83■□□□□ 0.45
CTC1-203ENST00000578240 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
CTC1-203ENST00000578240 PLEKHG3A1L390 1219 aa17.83■□□□□ 0.44
CTC1-203ENST00000578240 PPP2R1AP30153 589 aa17.83■□□□□ 0.44
CTC1-203ENST00000578240 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms