RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 SPATA31E1Q6ZUB1 1445 aa18.11■□□□□ 0.49
PRPF8-215ENST00000576958 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
PRPF8-215ENST00000576958 SOS2Q07890 1332 aaPredicted RBP18.09■□□□□ 0.49
PRPF8-215ENST00000576958 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
PRPF8-215ENST00000576958 MPHOSPH9Q99550 1183 aa18.08■□□□□ 0.48
PRPF8-215ENST00000576958 QTRT2Q9H974 415 aaKnown RBP18.07■□□□□ 0.48
PRPF8-215ENST00000576958 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
PRPF8-215ENST00000576958 CDC42BPGQ6DT37 1551 aa18.06■□□□□ 0.48
PRPF8-215ENST00000576958 PXDNQ92626 1479 aa18.06■□□□□ 0.48
PRPF8-215ENST00000576958 ESCO1Q5FWF5 840 aa18.05■□□□□ 0.48
PRPF8-215ENST00000576958 NGLY1Q96IV0 654 aa18.04■□□□□ 0.48
PRPF8-215ENST00000576958 CDK12Q9NYV4 1490 aaPredicted RBP18.03■□□□□ 0.48
PRPF8-215ENST00000576958 COL22A1Q8NFW1 1626 aaPredicted RBP18.03■□□□□ 0.48
PRPF8-215ENST00000576958 PIK3C2GO75747 1445 aa18.03■□□□□ 0.48
PRPF8-215ENST00000576958 FOXO3O43524 673 aa18.02■□□□□ 0.48
PRPF8-215ENST00000576958 LRPPRCP42704 1394 aaKnown RBP18.02■□□□□ 0.47
PRPF8-215ENST00000576958 MYOM2P54296 1465 aa18.01■□□□□ 0.47
PRPF8-215ENST00000576958 TECPR2O15040 1411 aa18.01■□□□□ 0.47
PRPF8-215ENST00000576958 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
PRPF8-215ENST00000576958 RGPD8O14715 1765 aaPredicted RBP18■□□□□ 0.47
PRPF8-215ENST00000576958 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
PRPF8-215ENST00000576958 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
PRPF8-215ENST00000576958 USP21Q9UK80 565 aa17.99■□□□□ 0.47
PRPF8-215ENST00000576958 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
PRPF8-215ENST00000576958 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
PRPF8-215ENST00000576958 CFAP70Q5T0N1 1121 aa17.98■□□□□ 0.47
PRPF8-215ENST00000576958 ABCC11Q96J66 1382 aa17.97■□□□□ 0.47
PRPF8-215ENST00000576958 ATRNO75882 1429 aa17.97■□□□□ 0.47
PRPF8-215ENST00000576958 BCL9LQ86UU0 1499 aa17.96■□□□□ 0.47
PRPF8-215ENST00000576958 ANKRD30BQ9BXX2 1392 aa17.96■□□□□ 0.47
PRPF8-215ENST00000576958 SAFB2Q14151 953 aaKnown RBP eCLIP17.96■□□□□ 0.47
PRPF8-215ENST00000576958 NPHP3Q7Z494 1330 aa17.96■□□□□ 0.46
PRPF8-215ENST00000576958 EP400Q96L91 3159 aa17.95■□□□□ 0.46
PRPF8-215ENST00000576958 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
PRPF8-215ENST00000576958 FNBP4Q8N3X1 1017 aaPredicted RBP17.95■□□□□ 0.46
PRPF8-215ENST00000576958 NRXN1Q9ULB1 1477 aa17.94■□□□□ 0.46
PRPF8-215ENST00000576958 SRCAPQ6ZRS2 3230 aa17.93■□□□□ 0.46
PRPF8-215ENST00000576958 RAB3GAP2Q9H2M9 1393 aa17.92■□□□□ 0.46
PRPF8-215ENST00000576958 CABLES1Q8TDN4 633 aa17.92■□□□□ 0.46
PRPF8-215ENST00000576958 C14orf93Q9H972 538 aaKnown RBP17.92■□□□□ 0.46
PRPF8-215ENST00000576958 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
PRPF8-215ENST00000576958 TRPC5Q9UL62 973 aaPredicted RBP17.91■□□□□ 0.46
PRPF8-215ENST00000576958 PRAM1Q96QH2 718 aa17.9■□□□□ 0.46
PRPF8-215ENST00000576958 SPATA31A3Q5VYP0 1347 aa17.9■□□□□ 0.46
PRPF8-215ENST00000576958 GLI3P10071 1580 aa17.89■□□□□ 0.45
PRPF8-215ENST00000576958 KRT28Q7Z3Y7 464 aa17.89■□□□□ 0.45
PRPF8-215ENST00000576958 KIF1AQ12756 1690 aa17.88■□□□□ 0.45
PRPF8-215ENST00000576958 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
PRPF8-215ENST00000576958 HIRIP3Q9BW71 556 aaPredicted RBP17.87■□□□□ 0.45
PRPF8-215ENST00000576958 ABCA3Q99758 1704 aa17.86■□□□□ 0.45
PRPF8-215ENST00000576958 PMFBP1Q8TBY8 1022 aa17.86■□□□□ 0.45
PRPF8-215ENST00000576958 SLIT2O94813 1529 aa17.86■□□□□ 0.45
PRPF8-215ENST00000576958 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
PRPF8-215ENST00000576958 PHF8Q9UPP1 1060 aa17.85■□□□□ 0.45
PRPF8-215ENST00000576958 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
PRPF8-215ENST00000576958 ATAD2Q6PL18 1390 aa17.84■□□□□ 0.45
PRPF8-215ENST00000576958 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
PRPF8-215ENST00000576958 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
PRPF8-215ENST00000576958 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.84■□□□□ 0.45
PRPF8-215ENST00000576958 TNS3Q68CZ2 1445 aa17.83■□□□□ 0.45
PRPF8-215ENST00000576958 DHX57Q6P158 1386 aaKnown RBP17.83■□□□□ 0.45
PRPF8-215ENST00000576958 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
PRPF8-215ENST00000576958 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
PRPF8-215ENST00000576958 PLCH1Q4KWH8 1693 aa17.83■□□□□ 0.44
PRPF8-215ENST00000576958 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
PRPF8-215ENST00000576958 LMOD2Q6P5Q4 547 aa17.81■□□□□ 0.44
PRPF8-215ENST00000576958 UNC5CLQ8IV45 518 aa17.81■□□□□ 0.44
PRPF8-215ENST00000576958 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
PRPF8-215ENST00000576958 DLC1Q96QB1 1528 aa17.81■□□□□ 0.44
PRPF8-215ENST00000576958 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
PRPF8-215ENST00000576958 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
PRPF8-215ENST00000576958 DCAF11Q8TEB1 546 aa17.79■□□□□ 0.44
PRPF8-215ENST00000576958 POGKQ9P215 609 aa17.79■□□□□ 0.44
PRPF8-215ENST00000576958 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
PRPF8-215ENST00000576958 HAP1P54257 671 aaPredicted RBP17.76■□□□□ 0.43
PRPF8-215ENST00000576958 PSME1Q06323 249 aa17.76■□□□□ 0.43
PRPF8-215ENST00000576958 ALS2Q96Q42 1657 aa17.75■□□□□ 0.43
PRPF8-215ENST00000576958 DEFB132Q7Z7B7 95 aa17.75■□□□□ 0.43
PRPF8-215ENST00000576958 SBNO1A3KN83 1393 aa17.75■□□□□ 0.43
PRPF8-215ENST00000576958 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
PRPF8-215ENST00000576958 SEPT12Q8IYM1 358 aa17.74■□□□□ 0.43
PRPF8-215ENST00000576958 ARHGEF28Q8N1W1 1705 aaKnown RBP17.74■□□□□ 0.43
PRPF8-215ENST00000576958 ANKARQ7Z5J8 1434 aa17.73■□□□□ 0.43
PRPF8-215ENST00000576958 CRYBG1Q9Y4K1 1723 aa17.73■□□□□ 0.43
PRPF8-215ENST00000576958 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
PRPF8-215ENST00000576958 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
PRPF8-215ENST00000576958 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
PRPF8-215ENST00000576958 VPS72Q15906 364 aa17.71■□□□□ 0.43
PRPF8-215ENST00000576958 ACIN1Q9UKV3 1341 aaKnown RBP17.71■□□□□ 0.42
PRPF8-215ENST00000576958 WASLO00401 505 aaPredicted RBP17.7■□□□□ 0.42
PRPF8-215ENST00000576958 FAM182BQ5T319 152 aa17.7■□□□□ 0.42
PRPF8-215ENST00000576958 ARHGEF10O15013 1369 aa17.69■□□□□ 0.42
PRPF8-215ENST00000576958 ATP7BP35670 1465 aa17.69■□□□□ 0.42
PRPF8-215ENST00000576958 BTG4Q9NY30 223 aa17.68■□□□□ 0.42
PRPF8-215ENST00000576958 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
PRPF8-215ENST00000576958 NUTM2GQ5VZR2 741 aa17.67■□□□□ 0.42
PRPF8-215ENST00000576958 BLMP54132 1417 aaPredicted RBP17.66■□□□□ 0.42
PRPF8-215ENST00000576958 PAK3O75914 559 aaPredicted RBP17.66■□□□□ 0.42
PRPF8-215ENST00000576958 ONECUT3O60422 494 aaPredicted RBP17.65■□□□□ 0.42
PRPF8-215ENST00000576958 NBPF1Q3BBV0 1214 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms