RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 MPHOSPH9Q99550 1183 aa19.67■□□□□ 0.74
ATP2A3-215ENST00000576957 SPATA31E1Q6ZUB1 1445 aa19.67■□□□□ 0.74
ATP2A3-215ENST00000576957 ADGRF5Q8IZF2 1346 aa19.66■□□□□ 0.74
ATP2A3-215ENST00000576957 QTRT2Q9H974 415 aaKnown RBP19.65■□□□□ 0.74
ATP2A3-215ENST00000576957 CDC42BPGQ6DT37 1551 aa19.65■□□□□ 0.74
ATP2A3-215ENST00000576957 RBM6P78332 1123 aaKnown RBP19.64■□□□□ 0.73
ATP2A3-215ENST00000576957 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
ATP2A3-215ENST00000576957 TECPR2O15040 1411 aa19.64■□□□□ 0.73
ATP2A3-215ENST00000576957 NGLY1Q96IV0 654 aa19.63■□□□□ 0.73
ATP2A3-215ENST00000576957 IFT172Q9UG01 1749 aa19.62■□□□□ 0.73
ATP2A3-215ENST00000576957 LRPPRCP42704 1394 aaKnown RBP19.62■□□□□ 0.73
ATP2A3-215ENST00000576957 NPHP3Q7Z494 1330 aa19.62■□□□□ 0.73
ATP2A3-215ENST00000576957 ABCC11Q96J66 1382 aa19.61■□□□□ 0.73
ATP2A3-215ENST00000576957 ADAMTS2O95450 1211 aa19.61■□□□□ 0.73
ATP2A3-215ENST00000576957 ESCO1Q5FWF5 840 aa19.61■□□□□ 0.73
ATP2A3-215ENST00000576957 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
ATP2A3-215ENST00000576957 COL22A1Q8NFW1 1626 aaPredicted RBP19.59■□□□□ 0.73
ATP2A3-215ENST00000576957 STK26Q9P289 416 aa19.59■□□□□ 0.73
ATP2A3-215ENST00000576957 WAPLQ7Z5K2 1190 aa19.58■□□□□ 0.72
ATP2A3-215ENST00000576957 KNDC1Q76NI1 1749 aa19.58■□□□□ 0.72
ATP2A3-215ENST00000576957 RGS12O14924 1447 aa19.58■□□□□ 0.72
ATP2A3-215ENST00000576957 FNBP4Q8N3X1 1017 aaPredicted RBP19.57■□□□□ 0.72
ATP2A3-215ENST00000576957 SIRT1Q96EB6 747 aa19.57■□□□□ 0.72
ATP2A3-215ENST00000576957 PXDNQ92626 1479 aa19.56■□□□□ 0.72
ATP2A3-215ENST00000576957 TMEM132EQ6IEE7 984 aa19.56■□□□□ 0.72
ATP2A3-215ENST00000576957 USP21Q9UK80 565 aa19.56■□□□□ 0.72
ATP2A3-215ENST00000576957 FOXO3O43524 673 aa19.55■□□□□ 0.72
ATP2A3-215ENST00000576957 YTHDC2Q9H6S0 1430 aaKnown RBP19.55■□□□□ 0.72
ATP2A3-215ENST00000576957 TRPC5Q9UL62 973 aaPredicted RBP19.55■□□□□ 0.72
ATP2A3-215ENST00000576957 MYOM2P54296 1465 aa19.54■□□□□ 0.72
ATP2A3-215ENST00000576957 C14orf93Q9H972 538 aaKnown RBP19.53■□□□□ 0.72
ATP2A3-215ENST00000576957 PLEKHH1Q9ULM0 1364 aa19.53■□□□□ 0.72
ATP2A3-215ENST00000576957 NRXN1Q9ULB1 1477 aa19.51■□□□□ 0.71
ATP2A3-215ENST00000576957 FMN2Q9NZ56 1722 aa19.51■□□□□ 0.71
ATP2A3-215ENST00000576957 ATRNO75882 1429 aa19.51■□□□□ 0.71
ATP2A3-215ENST00000576957 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
ATP2A3-215ENST00000576957 NUTM2FA1L443 756 aa19.5■□□□□ 0.71
ATP2A3-215ENST00000576957 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
ATP2A3-215ENST00000576957 KIF1AQ12756 1690 aa19.49■□□□□ 0.71
ATP2A3-215ENST00000576957 MARF1Q9Y4F3 1742 aaKnown RBP19.48■□□□□ 0.71
ATP2A3-215ENST00000576957 ATAD2Q6PL18 1390 aa19.47■□□□□ 0.71
ATP2A3-215ENST00000576957 CFAP70Q5T0N1 1121 aa19.47■□□□□ 0.71
ATP2A3-215ENST00000576957 SPATA31A3Q5VYP0 1347 aa19.47■□□□□ 0.71
ATP2A3-215ENST00000576957 BCL9LQ86UU0 1499 aa19.47■□□□□ 0.71
ATP2A3-215ENST00000576957 KRT28Q7Z3Y7 464 aa19.45■□□□□ 0.7
ATP2A3-215ENST00000576957 RAB3GAP2Q9H2M9 1393 aa19.44■□□□□ 0.7
ATP2A3-215ENST00000576957 PSME1Q06323 249 aa19.43■□□□□ 0.7
ATP2A3-215ENST00000576957 PHF8Q9UPP1 1060 aa19.43■□□□□ 0.7
ATP2A3-215ENST00000576957 DLC1Q96QB1 1528 aa19.42■□□□□ 0.7
ATP2A3-215ENST00000576957 GJD4Q96KN9 370 aaPredicted RBP19.42■□□□□ 0.7
ATP2A3-215ENST00000576957 PRAM1Q96QH2 718 aa19.42■□□□□ 0.7
ATP2A3-215ENST00000576957 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.41■□□□□ 0.7
ATP2A3-215ENST00000576957 UNC5CLQ8IV45 518 aa19.4■□□□□ 0.7
ATP2A3-215ENST00000576957 TNS3Q68CZ2 1445 aa19.4■□□□□ 0.7
ATP2A3-215ENST00000576957 SLIT2O94813 1529 aa19.4■□□□□ 0.7
ATP2A3-215ENST00000576957 RGPD8O14715 1765 aaPredicted RBP19.39■□□□□ 0.7
ATP2A3-215ENST00000576957 STAC3Q96MF2 364 aa19.39■□□□□ 0.69
ATP2A3-215ENST00000576957 POGKQ9P215 609 aa19.39■□□□□ 0.69
ATP2A3-215ENST00000576957 SBNO1A3KN83 1393 aa19.39■□□□□ 0.69
ATP2A3-215ENST00000576957 ANKARQ7Z5J8 1434 aa19.38■□□□□ 0.69
ATP2A3-215ENST00000576957 CCDC125Q86Z20 511 aa19.38■□□□□ 0.69
ATP2A3-215ENST00000576957 USP32Q8NFA0 1604 aa19.37■□□□□ 0.69
ATP2A3-215ENST00000576957 SAFB2Q14151 953 aaKnown RBP eCLIP19.37■□□□□ 0.69
ATP2A3-215ENST00000576957 ADGRB1O14514 1584 aa19.36■□□□□ 0.69
ATP2A3-215ENST00000576957 ARHGEF10O15013 1369 aa19.36■□□□□ 0.69
ATP2A3-215ENST00000576957 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
ATP2A3-215ENST00000576957 ADGRB2O60241 1585 aa19.36■□□□□ 0.69
ATP2A3-215ENST00000576957 RALGAPBQ86X10 1494 aa19.34■□□□□ 0.69
ATP2A3-215ENST00000576957 EIF3AQ14152 1382 aaKnown RBP19.33■□□□□ 0.69
ATP2A3-215ENST00000576957 DCAF11Q8TEB1 546 aa19.33■□□□□ 0.68
ATP2A3-215ENST00000576957 TRAK1Q9UPV9 953 aa19.33■□□□□ 0.68
ATP2A3-215ENST00000576957 GLI3P10071 1580 aa19.32■□□□□ 0.68
ATP2A3-215ENST00000576957 EP400Q96L91 3159 aa19.32■□□□□ 0.68
ATP2A3-215ENST00000576957 VPS72Q15906 364 aa19.31■□□□□ 0.68
ATP2A3-215ENST00000576957 LMOD2Q6P5Q4 547 aa19.31■□□□□ 0.68
ATP2A3-215ENST00000576957 PMFBP1Q8TBY8 1022 aa19.31■□□□□ 0.68
ATP2A3-215ENST00000576957 CABLES1Q8TDN4 633 aa19.31■□□□□ 0.68
ATP2A3-215ENST00000576957 KDM2AQ9Y2K7 1162 aa19.31■□□□□ 0.68
ATP2A3-215ENST00000576957 NWD2Q9ULI1 1742 aa19.31■□□□□ 0.68
ATP2A3-215ENST00000576957 WASLO00401 505 aaPredicted RBP19.28■□□□□ 0.68
ATP2A3-215ENST00000576957 HIRIP3Q9BW71 556 aaPredicted RBP19.28■□□□□ 0.68
ATP2A3-215ENST00000576957 ZRANB1Q9UGI0 708 aa19.28■□□□□ 0.68
ATP2A3-215ENST00000576957 TULP4Q9NRJ4 1543 aa19.28■□□□□ 0.68
ATP2A3-215ENST00000576957 GPRASP1Q5JY77 1395 aa19.28■□□□□ 0.68
ATP2A3-215ENST00000576957 ABCA3Q99758 1704 aa19.28■□□□□ 0.68
ATP2A3-215ENST00000576957 MINK1Q8N4C8 1332 aaPredicted RBP19.27■□□□□ 0.68
ATP2A3-215ENST00000576957 PLCH1Q4KWH8 1693 aa19.27■□□□□ 0.68
ATP2A3-215ENST00000576957 ONECUT3O60422 494 aaPredicted RBP19.27■□□□□ 0.68
ATP2A3-215ENST00000576957 TRPM3Q9HCF6 1732 aaPredicted RBP19.26■□□□□ 0.67
ATP2A3-215ENST00000576957 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
ATP2A3-215ENST00000576957 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
ATP2A3-215ENST00000576957 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
ATP2A3-215ENST00000576957 SEPT12Q8IYM1 358 aa19.25■□□□□ 0.67
ATP2A3-215ENST00000576957 PLEKHG5O94827 1062 aa19.24■□□□□ 0.67
ATP2A3-215ENST00000576957 ALS2Q96Q42 1657 aa19.24■□□□□ 0.67
ATP2A3-215ENST00000576957 BRWD3Q6RI45 1802 aa19.23■□□□□ 0.67
ATP2A3-215ENST00000576957 CCDC9Q9Y3X0 531 aaKnown RBP19.23■□□□□ 0.67
ATP2A3-215ENST00000576957 NGDNQ8NEJ9 315 aaKnown RBP19.22■□□□□ 0.67
ATP2A3-215ENST00000576957 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
ATP2A3-215ENST00000576957 SF3B2Q13435 895 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms