RNA–Protein interactions for RNA: ENST00000576677.5

TBCD-222, Transcript of tubulin folding cofactor D, human

TSL 1 (best)

Gene TBCD, Length 1,926 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TBCD-222	ENST00000576677	ANKRD36B	Q8N2N9	1353 aa		29.5	■■■□□ 2.31
TBCD-222	ENST00000576677	USP32	Q8NFA0	1604 aa		29.5	■■■□□ 2.31
TBCD-222	ENST00000576677	CEBPA	P49715	358 aa	Predicted RBP	29.49	■■■□□ 2.31
TBCD-222	ENST00000576677	ABCC11	Q96J66	1382 aa		29.49	■■■□□ 2.31
TBCD-222	ENST00000576677	BLM	P54132	1417 aa	Predicted RBP	29.49	■■■□□ 2.31
TBCD-222	ENST00000576677	SMG6	Q86US8	1419 aa	Known RBP	29.49	■■■□□ 2.31
TBCD-222	ENST00000576677	MINK1	Q8N4C8	1332 aa	Predicted RBP	29.48	■■■□□ 2.31
TBCD-222	ENST00000576677	ATAD2	Q6PL18	1390 aa		29.47	■■■□□ 2.31
TBCD-222	ENST00000576677	SRPK2	P78362	688 aa	Known RBP	29.47	■■■□□ 2.31
TBCD-222	ENST00000576677	MET	P08581	1390 aa		29.45	■■■□□ 2.3
TBCD-222	ENST00000576677	CGNL1	Q0VF96	1302 aa		29.43	■■■□□ 2.3
TBCD-222	ENST00000576677	NUDC	Q9Y266	331 aa		29.42	■■■□□ 2.3
TBCD-222	ENST00000576677	SENP3-EIF4A1	A0A087X0R7	540 aa		29.41	■■■□□ 2.3
TBCD-222	ENST00000576677	ADAMTS8	Q9UP79	889 aa		29.39	■■■□□ 2.3
TBCD-222	ENST00000576677	TECPR2	O15040	1411 aa		29.39	■■■□□ 2.3
TBCD-222	ENST00000576677	WDR43	Q15061	677 aa	Known RBP eCLIP	29.39	■■■□□ 2.3
TBCD-222	ENST00000576677	PLEKHH1	Q9ULM0	1364 aa		29.39	■■■□□ 2.3
TBCD-222	ENST00000576677	NSD2	O96028	1365 aa		29.38	■■■□□ 2.29
TBCD-222	ENST00000576677	WAPL	Q7Z5K2	1190 aa		29.38	■■■□□ 2.29
TBCD-222	ENST00000576677	KNDC1	Q76NI1	1749 aa		29.38	■■■□□ 2.29
TBCD-222	ENST00000576677		A0A1W2PP64	1363 aa		29.38	■■■□□ 2.29
TBCD-222	ENST00000576677	PLEKHG1	Q9ULL1	1385 aa		29.38	■■■□□ 2.29
TBCD-222	ENST00000576677	CDK19	Q9BWU1	502 aa		29.37	■■■□□ 2.29
TBCD-222	ENST00000576677	DNAJC5	Q9H3Z4	198 aa		29.37	■■■□□ 2.29
TBCD-222	ENST00000576677	MORC1	Q86VD1	984 aa		29.37	■■■□□ 2.29
TBCD-222	ENST00000576677	ADAMTS13	Q76LX8	1427 aa		29.36	■■■□□ 2.29
TBCD-222	ENST00000576677	BCAN	Q96GW7	911 aa		29.35	■■■□□ 2.29
TBCD-222	ENST00000576677	FAM135B	Q49AJ0	1406 aa		29.35	■■■□□ 2.29
TBCD-222	ENST00000576677	SLIT1	O75093	1534 aa		29.35	■■■□□ 2.29
TBCD-222	ENST00000576677	LTK	P29376	864 aa		29.35	■■■□□ 2.29
TBCD-222	ENST00000576677	SIRT1	Q96EB6	747 aa		29.35	■■■□□ 2.29
TBCD-222	ENST00000576677	CPS1	P31327	1500 aa		29.34	■■■□□ 2.29
TBCD-222	ENST00000576677	ARHGAP23	Q9P227	1491 aa		29.34	■■■□□ 2.29
TBCD-222	ENST00000576677	TERF2IP	Q9NYB0	399 aa		29.33	■■■□□ 2.29
TBCD-222	ENST00000576677	CD163L1	Q9NR16	1453 aa		29.32	■■■□□ 2.28
TBCD-222	ENST00000576677	PDE3B	Q13370	1112 aa		29.32	■■■□□ 2.28
TBCD-222	ENST00000576677	TXNDC2	Q86VQ3	553 aa		29.32	■■■□□ 2.28
TBCD-222	ENST00000576677	POLR3A	O14802	1390 aa	Predicted RBP	29.31	■■■□□ 2.28
TBCD-222	ENST00000576677	PLPPR3	Q6T4P5	718 aa		29.3	■■■□□ 2.28
TBCD-222	ENST00000576677	EID1	Q9Y6B2	187 aa		29.3	■■■□□ 2.28
TBCD-222	ENST00000576677	SALL2	Q9Y467	1007 aa	Predicted RBP	29.29	■■■□□ 2.28
TBCD-222	ENST00000576677	MED14	O60244	1454 aa		29.28	■■■□□ 2.28
TBCD-222	ENST00000576677	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.26	■■■□□ 2.27
TBCD-222	ENST00000576677	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	29.25	■■■□□ 2.27
TBCD-222	ENST00000576677	CABP1	Q9NZU7	370 aa		29.25	■■■□□ 2.27
TBCD-222	ENST00000576677	WASL	O00401	505 aa	Predicted RBP	29.24	■■■□□ 2.27
TBCD-222	ENST00000576677	TNNT2	P45379	298 aa	Predicted RBP	29.24	■■■□□ 2.27
TBCD-222	ENST00000576677	ERICH6B	Q5W0A0	696 aa		29.24	■■■□□ 2.27
TBCD-222	ENST00000576677	ATP7B	P35670	1465 aa		29.23	■■■□□ 2.27
TBCD-222	ENST00000576677	IRX6	P78412	446 aa	Predicted RBP	29.23	■■■□□ 2.27
TBCD-222	ENST00000576677	ROBO2	Q9HCK4	1378 aa		29.22	■■■□□ 2.27
TBCD-222	ENST00000576677	RIMS1	Q86UR5	1692 aa	Known RBP	29.21	■■■□□ 2.27
TBCD-222	ENST00000576677	RNF123	Q5XPI4	1314 aa		29.2	■■■□□ 2.27
TBCD-222	ENST00000576677	PELP1	Q8IZL8	1130 aa	Known RBP	29.18	■■■□□ 2.26
TBCD-222	ENST00000576677	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	29.18	■■■□□ 2.26
TBCD-222	ENST00000576677	MTHFS	P49914	203 aa		29.18	■■■□□ 2.26
TBCD-222	ENST00000576677	FYB1	O15117	783 aa		29.17	■■■□□ 2.26
TBCD-222	ENST00000576677	SLC26A8	Q96RN1	970 aa		29.17	■■■□□ 2.26
TBCD-222	ENST00000576677	ANKRD26	Q9UPS8	1709 aa		29.17	■■■□□ 2.26
TBCD-222	ENST00000576677	SHPRH	Q149N8	1683 aa		29.17	■■■□□ 2.26
TBCD-222	ENST00000576677	TBX22	Q9Y458	520 aa		29.16	■■■□□ 2.26
TBCD-222	ENST00000576677	GGNBP2	Q9H3C7	697 aa		29.16	■■■□□ 2.26
TBCD-222	ENST00000576677	DIP2A	Q14689	1571 aa		29.15	■■■□□ 2.26
TBCD-222	ENST00000576677	PTPRU	Q92729	1446 aa		29.15	■■■□□ 2.26
TBCD-222	ENST00000576677	CDCA7L	Q96GN5	454 aa		29.15	■■■□□ 2.26
TBCD-222	ENST00000576677	ADGRB2	O60241	1585 aa		29.15	■■■□□ 2.26
TBCD-222	ENST00000576677	ADAMTSL3	P82987	1691 aa		29.15	■■■□□ 2.26
TBCD-222	ENST00000576677	PPIP5K1	Q6PFW1	1433 aa		29.14	■■■□□ 2.26
TBCD-222	ENST00000576677	CFAP53	Q96M91	514 aa		29.14	■■■□□ 2.26
TBCD-222	ENST00000576677	CCDC146	Q8IYE0	955 aa		29.13	■■■□□ 2.25
TBCD-222	ENST00000576677	CPSF1	Q10570	1443 aa	Known RBP	29.13	■■■□□ 2.25
TBCD-222	ENST00000576677	ZNF521	Q96K83	1311 aa		29.12	■■■□□ 2.25
TBCD-222	ENST00000576677	NUDT16	Q96DE0	195 aa	Known RBP	29.12	■■■□□ 2.25
TBCD-222	ENST00000576677	CCDC61	Q9Y6R9	512 aa		29.1	■■■□□ 2.25
TBCD-222	ENST00000576677	KIF20B	Q96Q89	1820 aa		29.1	■■■□□ 2.25
TBCD-222	ENST00000576677	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.09	■■■□□ 2.25
TBCD-222	ENST00000576677	PTCH1	Q13635	1447 aa		29.09	■■■□□ 2.25
TBCD-222	ENST00000576677	CDC42BPG	Q6DT37	1551 aa		29.08	■■■□□ 2.25
TBCD-222	ENST00000576677	EDC4	Q6P2E9	1401 aa	Known RBP	29.07	■■■□□ 2.24
TBCD-222	ENST00000576677	APAF1	O14727	1248 aa		29.07	■■■□□ 2.24
TBCD-222	ENST00000576677	NGEF	Q8N5V2	710 aa		29.07	■■■□□ 2.24
TBCD-222	ENST00000576677	AMOTL2	Q9Y2J4	779 aa		29.07	■■■□□ 2.24
TBCD-222	ENST00000576677	RCAN3	Q9UKA8	241 aa		29.06	■■■□□ 2.24
TBCD-222	ENST00000576677	ZNF142	P52746	1687 aa	Predicted RBP	29.06	■■■□□ 2.24
TBCD-222	ENST00000576677	PRR36	Q9H6K5	1346 aa		29.04	■■■□□ 2.24
TBCD-222	ENST00000576677	PPP4R2	Q9NY27	417 aa		29.04	■■■□□ 2.24
TBCD-222	ENST00000576677	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	29.03	■■■□□ 2.24	5e-7	■□□□□ 8.1
TBCD-222	ENST00000576677	GOLGA2	Q08379	1002 aa		29.02	■■■□□ 2.24
TBCD-222	ENST00000576677	NCKAP5L	Q9HCH0	1330 aa		29.02	■■■□□ 2.24
TBCD-222	ENST00000576677	MON2	Q7Z3U7	1717 aa		29	■■■□□ 2.23
TBCD-222	ENST00000576677	XRN1	Q8IZH2	1706 aa	Known RBP	29	■■■□□ 2.23
TBCD-222	ENST00000576677	PIK3R4	Q99570	1358 aa		28.99	■■■□□ 2.23
TBCD-222	ENST00000576677	COL3A1	P02461	1466 aa	Predicted RBP	28.99	■■■□□ 2.23
TBCD-222	ENST00000576677	RUNDC1	Q96C34	613 aa		28.99	■■■□□ 2.23
TBCD-222	ENST00000576677	TOPAZ1	Q8N9V7	1692 aa		28.98	■■■□□ 2.23
TBCD-222	ENST00000576677	AKAP12	Q02952	1782 aa		28.98	■■■□□ 2.23
TBCD-222	ENST00000576677	RRP1	P56182	461 aa	Known RBP	28.98	■■■□□ 2.23
TBCD-222	ENST00000576677	DUSP27	Q5VZP5	1158 aa		28.98	■■■□□ 2.23
TBCD-222	ENST00000576677	ZNF692	Q9BU19	519 aa	Predicted RBP	28.98	■■■□□ 2.23
TBCD-222	ENST00000576677	IQSEC2	Q5JU85	1478 aa		28.97	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms