RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CT47B1P0C2W7 299 aaPredicted RBP15.94■□□□□ 0.14
PCDHGB3-201ENST00000576222 XRCC6P12956 609 aaKnown RBP eCLIP15.94■□□□□ 0.14
PCDHGB3-201ENST00000576222 LRPPRCP42704 1394 aaKnown RBP15.94■□□□□ 0.14
PCDHGB3-201ENST00000576222 C8orf34Q49A92 452 aa15.94■□□□□ 0.14
PCDHGB3-201ENST00000576222 H3BQV1 296 aa15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 CFAP70Q5T0N1 1121 aa15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 IFFO2Q5TF58 517 aa15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 CHD1LQ86WJ1 897 aa15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 KIF3AQ9Y496 699 aa15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 VPS37CA5D8V6 355 aaPredicted RBP15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 VGFO15240 615 aaPredicted RBP15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 TPM3P06753 285 aa15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
PCDHGB3-201ENST00000576222 SF3A1Q15459 793 aaKnown RBP15.92■□□□□ 0.14
PCDHGB3-201ENST00000576222 TBC1D32Q96NH3 1257 aa15.92■□□□□ 0.14
PCDHGB3-201ENST00000576222 IGHDP01880 384 aa15.92■□□□□ 0.14
PCDHGB3-201ENST00000576222 MCM2P49736 904 aa15.92■□□□□ 0.14
PCDHGB3-201ENST00000576222 HDGFP51858 240 aaKnown RBP15.92■□□□□ 0.14
PCDHGB3-201ENST00000576222 NKTRP30414 1462 aaKnown RBP15.92■□□□□ 0.14
PCDHGB3-201ENST00000576222 MPNDQ8N594 471 aa15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 MINK1Q8N4C8 1332 aaPredicted RBP15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 ZKSCAN1P17029 563 aaPredicted RBP15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 RARSP54136 660 aaKnown RBP15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 RUFY2Q8WXA3 655 aa15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 SCAPERQ9BY12 1400 aa15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 GOLGA6L1Q8N7Z2 621 aa15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 TNPO1Q92973 898 aaKnown RBP15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 PTPRGP23470 1445 aa15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
PCDHGB3-201ENST00000576222 FAM184AQ8NB25 1140 aa15.9■□□□□ 0.14
PCDHGB3-201ENST00000576222 BICD2Q8TD16 824 aa15.9■□□□□ 0.14
PCDHGB3-201ENST00000576222 LETM1O95202 739 aaPredicted RBP15.9■□□□□ 0.14
PCDHGB3-201ENST00000576222 PANK2Q9BZ23 570 aa15.9■□□□□ 0.14
PCDHGB3-201ENST00000576222 HMOX1P09601 288 aa15.89■□□□□ 0.13
PCDHGB3-201ENST00000576222 PTPRKQ15262 1439 aa15.89■□□□□ 0.13
PCDHGB3-201ENST00000576222 SASS6Q6UVJ0 657 aa15.89■□□□□ 0.13
PCDHGB3-201ENST00000576222 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
PCDHGB3-201ENST00000576222 PODXL2Q9NZ53 605 aa15.89■□□□□ 0.13
PCDHGB3-201ENST00000576222 SLC12A5Q9H2X9 1139 aa15.88■□□□□ 0.13
PCDHGB3-201ENST00000576222 COG3Q96JB2 828 aa15.88■□□□□ 0.13
PCDHGB3-201ENST00000576222 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
PCDHGB3-201ENST00000576222 RNF123Q5XPI4 1314 aa15.87■□□□□ 0.13
PCDHGB3-201ENST00000576222 PRG4Q92954 1404 aaPredicted RBP15.86■□□□□ 0.13
PCDHGB3-201ENST00000576222 CCAR2Q8N163 923 aaKnown RBP15.86■□□□□ 0.13
PCDHGB3-201ENST00000576222 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
PCDHGB3-201ENST00000576222 XPCQ01831 940 aaPredicted RBP15.86■□□□□ 0.13
PCDHGB3-201ENST00000576222 HOMER1Q86YM7 354 aa15.86■□□□□ 0.13
PCDHGB3-201ENST00000576222 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
PCDHGB3-201ENST00000576222 ABCC5O15440 1437 aa15.86■□□□□ 0.13
PCDHGB3-201ENST00000576222 TROQ12816 1431 aaPredicted RBP15.86■□□□□ 0.13
PCDHGB3-201ENST00000576222 HECW1Q76N89 1606 aa15.85■□□□□ 0.13
PCDHGB3-201ENST00000576222 EPRSP07814 1512 aaKnown RBP15.85■□□□□ 0.13
PCDHGB3-201ENST00000576222 TMEM132EQ6IEE7 984 aa15.85■□□□□ 0.13
PCDHGB3-201ENST00000576222 TMEM57Q8N5G2 664 aa15.85■□□□□ 0.13
PCDHGB3-201ENST00000576222 SSFA2P28290 1259 aa15.85■□□□□ 0.13
PCDHGB3-201ENST00000576222 TRIM5Q9C035 493 aa15.85■□□□□ 0.13
PCDHGB3-201ENST00000576222 SYCE3A1L190 88 aa15.85■□□□□ 0.13
PCDHGB3-201ENST00000576222 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
PCDHGB3-201ENST00000576222 CCDC27Q2M243 656 aa15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 ERC2O15083 957 aa15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 FIBPO43427 364 aa15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 FKBP5Q13451 457 aaPredicted RBP15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 MLECQ14165 292 aa15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 CCDC66A2RUB6 948 aa15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 AMPHP49418 695 aa15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 TPD52L1Q16890 204 aaPredicted RBP15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 CCDC34Q96HJ3 373 aa15.84■□□□□ 0.13
PCDHGB3-201ENST00000576222 SPC24Q8NBT2 197 aa15.83■□□□□ 0.13
PCDHGB3-201ENST00000576222 GPS2Q13227 327 aa15.83■□□□□ 0.12
PCDHGB3-201ENST00000576222 A0A0G2JS52 829 aa15.83■□□□□ 0.12
PCDHGB3-201ENST00000576222 PRKAR2BP31323 418 aa15.83■□□□□ 0.12
PCDHGB3-201ENST00000576222 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.12
PCDHGB3-201ENST00000576222 CDK13Q14004 1512 aaKnown RBP15.82■□□□□ 0.12
PCDHGB3-201ENST00000576222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.82■□□□□ 0.12
PCDHGB3-201ENST00000576222 ARGLU1Q9NWB6 273 aaPredicted RBP15.82■□□□□ 0.12
PCDHGB3-201ENST00000576222 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
PCDHGB3-201ENST00000576222 RRAGDQ9NQL2 400 aaPredicted RBP15.81■□□□□ 0.12
PCDHGB3-201ENST00000576222 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
PCDHGB3-201ENST00000576222 RNF20Q5VTR2 975 aa15.8■□□□□ 0.12
PCDHGB3-201ENST00000576222 NECTIN2Q92692 538 aa15.8■□□□□ 0.12
PCDHGB3-201ENST00000576222 PRDM10Q9NQV6 1147 aa15.8■□□□□ 0.12
PCDHGB3-201ENST00000576222 SSH1Q8WYL5 1049 aa15.8■□□□□ 0.12
PCDHGB3-201ENST00000576222 CHMP4CQ96CF2 233 aa15.8■□□□□ 0.12
PCDHGB3-201ENST00000576222 MNS1Q8NEH6 495 aa15.79■□□□□ 0.12
PCDHGB3-201ENST00000576222 IFIT2P09913 472 aaKnown RBP15.79■□□□□ 0.12
PCDHGB3-201ENST00000576222 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
PCDHGB3-201ENST00000576222 CCDC73Q6ZRK6 1079 aa15.79■□□□□ 0.12
PCDHGB3-201ENST00000576222 KLHL40Q2TBA0 621 aa15.78■□□□□ 0.12
PCDHGB3-201ENST00000576222 CCDC192P0DO97 292 aa15.78■□□□□ 0.12
PCDHGB3-201ENST00000576222 PDCL2Q8N4E4 241 aa15.78■□□□□ 0.12
PCDHGB3-201ENST00000576222 NUTM2FA1L443 756 aa15.78■□□□□ 0.12
PCDHGB3-201ENST00000576222 GORABQ5T7V8 394 aa15.78■□□□□ 0.12
PCDHGB3-201ENST00000576222 PCDHB15Q9Y5E8 787 aa15.78■□□□□ 0.12
PCDHGB3-201ENST00000576222 BAG4O95429 457 aaKnown RBP15.77■□□□□ 0.12
PCDHGB3-201ENST00000576222 ZNF428Q96B54 188 aa15.77■□□□□ 0.12
PCDHGB3-201ENST00000576222 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms