RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 UNC5CLQ8IV45 518 aa9.12□□□□□ -0.95
SMG6-219ENST00000575663 LRPPRCP42704 1394 aaKnown RBP9.12□□□□□ -0.95
SMG6-219ENST00000575663 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.11□□□□□ -0.95
SMG6-219ENST00000575663 BAG6P46379 1132 aa9.11□□□□□ -0.95
SMG6-219ENST00000575663 HFM1A2PYH4 1435 aa9.11□□□□□ -0.95
SMG6-219ENST00000575663 NUP155O75694 1391 aa9.11□□□□□ -0.95
SMG6-219ENST00000575663 SLIT2O94813 1529 aa9.1□□□□□ -0.95
SMG6-219ENST00000575663 HRCP23327 699 aa9.1□□□□□ -0.95
SMG6-219ENST00000575663 PRAG1Q86YV5 1406 aa9.1□□□□□ -0.95
SMG6-219ENST00000575663 GLI3P10071 1580 aa9.1□□□□□ -0.95
SMG6-219ENST00000575663 PXDNQ92626 1479 aa9.09□□□□□ -0.95
SMG6-219ENST00000575663 PSDA5PKW4 1024 aaPredicted RBP9.09□□□□□ -0.95
SMG6-219ENST00000575663 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
SMG6-219ENST00000575663 SEPT12Q8IYM1 358 aa9.09□□□□□ -0.95
SMG6-219ENST00000575663 NEXMIFQ5QGS0 1516 aa9.09□□□□□ -0.95
SMG6-219ENST00000575663 ROBO2Q9HCK4 1378 aa9.09□□□□□ -0.95
SMG6-219ENST00000575663 CDC42BPGQ6DT37 1551 aa9.08□□□□□ -0.96
SMG6-219ENST00000575663 A0A0G2JS52 829 aa9.08□□□□□ -0.96
SMG6-219ENST00000575663 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
SMG6-219ENST00000575663 MYT1Q01538 1121 aa9.08□□□□□ -0.96
SMG6-219ENST00000575663 KRT27Q7Z3Y8 459 aa9.08□□□□□ -0.96
SMG6-219ENST00000575663 ROCK1Q13464 1354 aa9.08□□□□□ -0.96
SMG6-219ENST00000575663 YY1P25490 414 aa9.07□□□□□ -0.96
SMG6-219ENST00000575663 VPS72Q15906 364 aa9.07□□□□□ -0.96
SMG6-219ENST00000575663 CCDC9Q9Y3X0 531 aaKnown RBP9.07□□□□□ -0.96
SMG6-219ENST00000575663 MARF1Q9Y4F3 1742 aaKnown RBP9.07□□□□□ -0.96
SMG6-219ENST00000575663 USP32Q8NFA0 1604 aa9.06□□□□□ -0.96
SMG6-219ENST00000575663 FOXO3O43524 673 aa9.06□□□□□ -0.96
SMG6-219ENST00000575663 XPCQ01831 940 aaPredicted RBP9.06□□□□□ -0.96
SMG6-219ENST00000575663 CCDC144AA2RUR9 1427 aa9.05□□□□□ -0.96
SMG6-219ENST00000575663 VGFO15240 615 aaPredicted RBP9.05□□□□□ -0.96
SMG6-219ENST00000575663 R3HDM1Q15032 1099 aaKnown RBP9.04□□□□□ -0.96
SMG6-219ENST00000575663 SPATA31A3Q5VYP0 1347 aa9.04□□□□□ -0.96
SMG6-219ENST00000575663 NAIPQ13075 1403 aa9.03□□□□□ -0.96
SMG6-219ENST00000575663 CLTCL1P53675 1640 aa9.02□□□□□ -0.96
SMG6-219ENST00000575663 DCAF8L1A6NGE4 600 aa9.02□□□□□ -0.97
SMG6-219ENST00000575663 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
SMG6-219ENST00000575663 DISP2A7MBM2 1401 aa9.02□□□□□ -0.97
SMG6-219ENST00000575663 TNS3Q68CZ2 1445 aa9.02□□□□□ -0.97
SMG6-219ENST00000575663 ADGRB2O60241 1585 aa9.02□□□□□ -0.97
SMG6-219ENST00000575663 KIF1AQ12756 1690 aa9.01□□□□□ -0.97
SMG6-219ENST00000575663 NUTM2FA1L443 756 aa9.01□□□□□ -0.97
SMG6-219ENST00000575663 EN1Q05925 392 aaPredicted RBP9.01□□□□□ -0.97
SMG6-219ENST00000575663 RPGRIP1LQ68CZ1 1315 aa9.01□□□□□ -0.97
SMG6-219ENST00000575663 BRWD3Q6RI45 1802 aa9.01□□□□□ -0.97
SMG6-219ENST00000575663 ARHGEF10O15013 1369 aa9□□□□□ -0.97
SMG6-219ENST00000575663 RGPD1P0DJD0 1748 aa9□□□□□ -0.97
SMG6-219ENST00000575663 NWD2Q9ULI1 1742 aa9□□□□□ -0.97
SMG6-219ENST00000575663 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
SMG6-219ENST00000575663 PSME1Q06323 249 aa9□□□□□ -0.97
SMG6-219ENST00000575663 KRT28Q7Z3Y7 464 aa9□□□□□ -0.97
SMG6-219ENST00000575663 PLCH1Q4KWH8 1693 aa9□□□□□ -0.97
SMG6-219ENST00000575663 TECPR2O15040 1411 aa8.99□□□□□ -0.97
SMG6-219ENST00000575663 FAM98CQ17RN3 349 aaKnown RBP8.99□□□□□ -0.97
SMG6-219ENST00000575663 PARD3Q8TEW0 1356 aa8.99□□□□□ -0.97
SMG6-219ENST00000575663 PLEKHG5O94827 1062 aa8.98□□□□□ -0.97
SMG6-219ENST00000575663 LMOD2Q6P5Q4 547 aa8.98□□□□□ -0.97
SMG6-219ENST00000575663 PPP1R1BQ9UD71 204 aaPredicted RBP8.98□□□□□ -0.97
SMG6-219ENST00000575663 SBNO1A3KN83 1393 aa8.98□□□□□ -0.97
SMG6-219ENST00000575663 KIF1BO60333 1816 aa8.97□□□□□ -0.97
SMG6-219ENST00000575663 EZH2Q15910 746 aaKnown RBP8.97□□□□□ -0.97
SMG6-219ENST00000575663 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
SMG6-219ENST00000575663 NINLQ9Y2I6 1382 aa8.97□□□□□ -0.97
SMG6-219ENST00000575663 ITGAEP38570 1179 aa8.96□□□□□ -0.98
SMG6-219ENST00000575663 FMN2Q9NZ56 1722 aa8.95□□□□□ -0.98
SMG6-219ENST00000575663 NBPF8Q3BBV2 869 aa8.95□□□□□ -0.98
SMG6-219ENST00000575663 NBPF14Q5TI25 921 aa8.95□□□□□ -0.98
SMG6-219ENST00000575663 WAPLQ7Z5K2 1190 aa8.95□□□□□ -0.98
SMG6-219ENST00000575663 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
SMG6-219ENST00000575663 STK26Q9P289 416 aa8.95□□□□□ -0.98
SMG6-219ENST00000575663 PHF8Q9UPP1 1060 aa8.95□□□□□ -0.98
SMG6-219ENST00000575663 ABCC11Q96J66 1382 aa8.95□□□□□ -0.98
SMG6-219ENST00000575663 RRBP1Q9P2E9 1410 aaKnown RBP8.95□□□□□ -0.98
SMG6-219ENST00000575663 ABCA3Q99758 1704 aa8.94□□□□□ -0.98
SMG6-219ENST00000575663 FAM83GA6ND36 823 aa8.94□□□□□ -0.98
SMG6-219ENST00000575663 FAM182BQ5T319 152 aa8.94□□□□□ -0.98
SMG6-219ENST00000575663 FAM196AQ6ZSG2 479 aa8.94□□□□□ -0.98
SMG6-219ENST00000575663 CAMKK2Q96RR4 588 aa8.94□□□□□ -0.98
SMG6-219ENST00000575663 NRXN1Q9ULB1 1477 aa8.94□□□□□ -0.98
SMG6-219ENST00000575663 NRAPQ86VF7 1730 aa8.94□□□□□ -0.98
SMG6-219ENST00000575663 TNS1Q9HBL0 1735 aaKnown RBP8.94□□□□□ -0.98
SMG6-219ENST00000575663 APBA3O96018 575 aa8.93□□□□□ -0.98
SMG6-219ENST00000575663 SPON1Q9HCB6 807 aa8.93□□□□□ -0.98
SMG6-219ENST00000575663 SPATA31A5Q5VU36 1347 aa8.93□□□□□ -0.98
SMG6-219ENST00000575663 SPATA31A7Q8IWB4 1347 aa8.93□□□□□ -0.98
SMG6-219ENST00000575663 PLEKHH1Q9ULM0 1364 aa8.93□□□□□ -0.98
SMG6-219ENST00000575663 THSD7AQ9UPZ6 1657 aa8.93□□□□□ -0.98
SMG6-219ENST00000575663 PPLO60437 1756 aa8.92□□□□□ -0.98
SMG6-219ENST00000575663 COL14A1Q05707 1796 aaKnown RBP8.92□□□□□ -0.98
SMG6-219ENST00000575663 KNDC1Q76NI1 1749 aa8.92□□□□□ -0.98
SMG6-219ENST00000575663 SENP3-EIF4A1A0A087X0R7 540 aa8.92□□□□□ -0.98
SMG6-219ENST00000575663 TRIM37O94972 964 aa8.92□□□□□ -0.98
SMG6-219ENST00000575663 ANKRD30BQ9BXX2 1392 aa8.91□□□□□ -0.98
SMG6-219ENST00000575663 ANKARQ7Z5J8 1434 aa8.9□□□□□ -0.98
SMG6-219ENST00000575663 YTHDC2Q9H6S0 1430 aaKnown RBP8.9□□□□□ -0.98
SMG6-219ENST00000575663 GPRASP1Q5JY77 1395 aa8.9□□□□□ -0.98
SMG6-219ENST00000575663 ADGRF5Q8IZF2 1346 aa8.9□□□□□ -0.98
SMG6-219ENST00000575663 KCNQ2O43526 872 aa8.9□□□□□ -0.98
SMG6-219ENST00000575663 IFFO2Q5TF58 517 aa8.9□□□□□ -0.98
SMG6-219ENST00000575663 PRDM11Q9NQV5 511 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 850.8 ms