RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-211ENST00000575397 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
RFWD3-211ENST00000575397 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
RFWD3-211ENST00000575397 SOS2Q07890 1332 aaPredicted RBP13.84□□□□□ -0.19
RFWD3-211ENST00000575397 LAMC1P11047 1609 aa13.83□□□□□ -0.2
RFWD3-211ENST00000575397 ATRNO75882 1429 aa13.83□□□□□ -0.2
RFWD3-211ENST00000575397 EP400Q96L91 3159 aa13.83□□□□□ -0.2
RFWD3-211ENST00000575397 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.2
RFWD3-211ENST00000575397 CLTCL1P53675 1640 aa13.82□□□□□ -0.2
RFWD3-211ENST00000575397 FNBP4Q8N3X1 1017 aaPredicted RBP13.82□□□□□ -0.2
RFWD3-211ENST00000575397 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
RFWD3-211ENST00000575397 PTCH1Q13635 1447 aa13.81□□□□□ -0.2
RFWD3-211ENST00000575397 COL22A1Q8NFW1 1626 aaPredicted RBP13.8□□□□□ -0.2
RFWD3-211ENST00000575397 BCL9LQ86UU0 1499 aa13.79□□□□□ -0.2
RFWD3-211ENST00000575397 XPCQ01831 940 aaPredicted RBP13.78□□□□□ -0.2
RFWD3-211ENST00000575397 MYOM2P54296 1465 aa13.78□□□□□ -0.2
RFWD3-211ENST00000575397 CENPBP07199 599 aaPredicted RBP13.77□□□□□ -0.21
RFWD3-211ENST00000575397 ESCO1Q5FWF5 840 aa13.76□□□□□ -0.21
RFWD3-211ENST00000575397 KIF1BO60333 1816 aa13.76□□□□□ -0.21
RFWD3-211ENST00000575397 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
RFWD3-211ENST00000575397 GJD4Q96KN9 370 aaPredicted RBP13.75□□□□□ -0.21
RFWD3-211ENST00000575397 PXDNQ92626 1479 aa13.74□□□□□ -0.21
RFWD3-211ENST00000575397 NUTM2FA1L443 756 aa13.74□□□□□ -0.21
RFWD3-211ENST00000575397 FOXO3O43524 673 aa13.74□□□□□ -0.21
RFWD3-211ENST00000575397 CCDC125Q86Z20 511 aa13.74□□□□□ -0.21
RFWD3-211ENST00000575397 NPHP3Q7Z494 1330 aa13.73□□□□□ -0.21
RFWD3-211ENST00000575397 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
RFWD3-211ENST00000575397 GLI3P10071 1580 aa13.73□□□□□ -0.21
RFWD3-211ENST00000575397 VGFO15240 615 aaPredicted RBP13.72□□□□□ -0.21
RFWD3-211ENST00000575397 HFM1A2PYH4 1435 aa13.72□□□□□ -0.21
RFWD3-211ENST00000575397 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.21
RFWD3-211ENST00000575397 RALGAPBQ86X10 1494 aa13.71□□□□□ -0.21
RFWD3-211ENST00000575397 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.22
RFWD3-211ENST00000575397 PRAG1Q86YV5 1406 aa13.71□□□□□ -0.22
RFWD3-211ENST00000575397 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
RFWD3-211ENST00000575397 BRWD3Q6RI45 1802 aa13.69□□□□□ -0.22
RFWD3-211ENST00000575397 UNC5CLQ8IV45 518 aa13.69□□□□□ -0.22
RFWD3-211ENST00000575397 SLIT2O94813 1529 aa13.69□□□□□ -0.22
RFWD3-211ENST00000575397 NAIPQ13075 1403 aa13.68□□□□□ -0.22
RFWD3-211ENST00000575397 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
RFWD3-211ENST00000575397 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
RFWD3-211ENST00000575397 TIMELESSQ9UNS1 1208 aa13.68□□□□□ -0.22
RFWD3-211ENST00000575397 RAB3GAP2Q9H2M9 1393 aa13.68□□□□□ -0.22
RFWD3-211ENST00000575397 PPLO60437 1756 aa13.68□□□□□ -0.22
RFWD3-211ENST00000575397 ACIN1Q9UKV3 1341 aaKnown RBP13.67□□□□□ -0.22
RFWD3-211ENST00000575397 STK26Q9P289 416 aa13.67□□□□□ -0.22
RFWD3-211ENST00000575397 USP32Q8NFA0 1604 aa13.66□□□□□ -0.22
RFWD3-211ENST00000575397 SEPT12Q8IYM1 358 aa13.66□□□□□ -0.22
RFWD3-211ENST00000575397 PSDA5PKW4 1024 aaPredicted RBP13.65□□□□□ -0.22
RFWD3-211ENST00000575397 SF3B2Q13435 895 aaKnown RBP13.65□□□□□ -0.22
RFWD3-211ENST00000575397 LRPPRCP42704 1394 aaKnown RBP13.65□□□□□ -0.22
RFWD3-211ENST00000575397 PLEKHH1Q9ULM0 1364 aa13.65□□□□□ -0.22
RFWD3-211ENST00000575397 SPATA31A3Q5VYP0 1347 aa13.64□□□□□ -0.23
RFWD3-211ENST00000575397 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
RFWD3-211ENST00000575397 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
RFWD3-211ENST00000575397 CABLES1Q8TDN4 633 aa13.64□□□□□ -0.23
RFWD3-211ENST00000575397 HAP1P54257 671 aaPredicted RBP13.63□□□□□ -0.23
RFWD3-211ENST00000575397 CCDC9Q9Y3X0 531 aaKnown RBP13.63□□□□□ -0.23
RFWD3-211ENST00000575397 LRP5O75197 1615 aa13.63□□□□□ -0.23
RFWD3-211ENST00000575397 FMN2Q9NZ56 1722 aa13.62□□□□□ -0.23
RFWD3-211ENST00000575397 TMEM132EQ6IEE7 984 aa13.62□□□□□ -0.23
RFWD3-211ENST00000575397 KRT28Q7Z3Y7 464 aa13.62□□□□□ -0.23
RFWD3-211ENST00000575397 PLCH1Q4KWH8 1693 aa13.62□□□□□ -0.23
RFWD3-211ENST00000575397 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
RFWD3-211ENST00000575397 CCDC144AA2RUR9 1427 aa13.61□□□□□ -0.23
RFWD3-211ENST00000575397 KIF1AQ12756 1690 aa13.6□□□□□ -0.23
RFWD3-211ENST00000575397 A0A0G2JS52 829 aa13.6□□□□□ -0.23
RFWD3-211ENST00000575397 TECPR2O15040 1411 aa13.6□□□□□ -0.23
RFWD3-211ENST00000575397 MYT1Q01538 1121 aa13.6□□□□□ -0.23
RFWD3-211ENST00000575397 VPS72Q15906 364 aa13.6□□□□□ -0.23
RFWD3-211ENST00000575397 RGL3Q3MIN7 710 aa13.6□□□□□ -0.23
RFWD3-211ENST00000575397 KRT27Q7Z3Y8 459 aa13.6□□□□□ -0.23
RFWD3-211ENST00000575397 TNS3Q68CZ2 1445 aa13.59□□□□□ -0.23
RFWD3-211ENST00000575397 LMOD2Q6P5Q4 547 aa13.59□□□□□ -0.23
RFWD3-211ENST00000575397 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
RFWD3-211ENST00000575397 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.23
RFWD3-211ENST00000575397 ABCA3Q99758 1704 aa13.58□□□□□ -0.24
RFWD3-211ENST00000575397 NWD2Q9ULI1 1742 aa13.57□□□□□ -0.24
RFWD3-211ENST00000575397 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
RFWD3-211ENST00000575397 BAG6P46379 1132 aa13.57□□□□□ -0.24
RFWD3-211ENST00000575397 FAM182BQ5T319 152 aa13.57□□□□□ -0.24
RFWD3-211ENST00000575397 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
RFWD3-211ENST00000575397 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
RFWD3-211ENST00000575397 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
RFWD3-211ENST00000575397 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
RFWD3-211ENST00000575397 FAM98CQ17RN3 349 aaKnown RBP13.56□□□□□ -0.24
RFWD3-211ENST00000575397 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
RFWD3-211ENST00000575397 FAM83GA6ND36 823 aa13.55□□□□□ -0.24
RFWD3-211ENST00000575397 EN1Q05925 392 aaPredicted RBP13.55□□□□□ -0.24
RFWD3-211ENST00000575397 PSME1Q06323 249 aa13.54□□□□□ -0.24
RFWD3-211ENST00000575397 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
RFWD3-211ENST00000575397 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
RFWD3-211ENST00000575397 NRAPQ86VF7 1730 aa13.53□□□□□ -0.24
RFWD3-211ENST00000575397 R3HDM1Q15032 1099 aaKnown RBP13.53□□□□□ -0.24
RFWD3-211ENST00000575397 PMFBP1Q8TBY8 1022 aa13.53□□□□□ -0.24
RFWD3-211ENST00000575397 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
RFWD3-211ENST00000575397 NRXN1Q9ULB1 1477 aa13.53□□□□□ -0.24
RFWD3-211ENST00000575397 NEUROD1Q13562 356 aa13.52□□□□□ -0.25
RFWD3-211ENST00000575397 BTG4Q9NY30 223 aa13.52□□□□□ -0.25
RFWD3-211ENST00000575397 SBNO1A3KN83 1393 aa13.52□□□□□ -0.25
RFWD3-211ENST00000575397 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms