RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 YTHDC2Q9H6S0 1430 aaKnown RBP14.18□□□□□ -0.14
NPLOC4-216ENST00000574344 POTEAQ6S8J7 498 aa14.18□□□□□ -0.14
NPLOC4-216ENST00000574344 RGPD8O14715 1765 aaPredicted RBP14.17□□□□□ -0.14
NPLOC4-216ENST00000574344 LRRC59Q96AG4 307 aaKnown RBP14.17□□□□□ -0.14
NPLOC4-216ENST00000574344 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
NPLOC4-216ENST00000574344 WAPLQ7Z5K2 1190 aa14.16□□□□□ -0.14
NPLOC4-216ENST00000574344 ORAI2Q96SN7 254 aa14.16□□□□□ -0.14
NPLOC4-216ENST00000574344 KIF1AQ12756 1690 aa14.15□□□□□ -0.14
NPLOC4-216ENST00000574344 DHX57Q6P158 1386 aaKnown RBP14.15□□□□□ -0.14
NPLOC4-216ENST00000574344 ABCC11Q96J66 1382 aa14.15□□□□□ -0.14
NPLOC4-216ENST00000574344 PNPLA6Q8IY17 1366 aa14.14□□□□□ -0.15
NPLOC4-216ENST00000574344 PLEKHH1Q9ULM0 1364 aa14.14□□□□□ -0.15
NPLOC4-216ENST00000574344 NUTM2FA1L443 756 aa14.14□□□□□ -0.15
NPLOC4-216ENST00000574344 ESCO1Q5FWF5 840 aa14.14□□□□□ -0.15
NPLOC4-216ENST00000574344 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
NPLOC4-216ENST00000574344 ZNF772Q68DY9 489 aaPredicted RBP14.13□□□□□ -0.15
NPLOC4-216ENST00000574344 C14orf93Q9H972 538 aaKnown RBP14.13□□□□□ -0.15
NPLOC4-216ENST00000574344 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
NPLOC4-216ENST00000574344 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
NPLOC4-216ENST00000574344 COL22A1Q8NFW1 1626 aaPredicted RBP14.12□□□□□ -0.15
NPLOC4-216ENST00000574344 HRCP23327 699 aa14.11□□□□□ -0.15
NPLOC4-216ENST00000574344 DCAF11Q8TEB1 546 aa14.11□□□□□ -0.15
NPLOC4-216ENST00000574344 NPHP3Q7Z494 1330 aa14.11□□□□□ -0.15
NPLOC4-216ENST00000574344 SAFB2Q14151 953 aaKnown RBP eCLIP14.1□□□□□ -0.15
NPLOC4-216ENST00000574344 C8orf37Q96NL8 207 aa14.1□□□□□ -0.15
NPLOC4-216ENST00000574344 AFF2P51816 1311 aa14.1□□□□□ -0.15
NPLOC4-216ENST00000574344 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
NPLOC4-216ENST00000574344 DLC1Q96QB1 1528 aa14.1□□□□□ -0.15
NPLOC4-216ENST00000574344 ADGRB1O14514 1584 aa14.09□□□□□ -0.15
NPLOC4-216ENST00000574344 POGKQ9P215 609 aa14.09□□□□□ -0.15
NPLOC4-216ENST00000574344 ARHGEF28Q8N1W1 1705 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-216ENST00000574344 PXDNQ92626 1479 aa14.08□□□□□ -0.16
NPLOC4-216ENST00000574344 ADAMTS2O95450 1211 aa14.08□□□□□ -0.16
NPLOC4-216ENST00000574344 XPCQ01831 940 aaPredicted RBP14.08□□□□□ -0.16
NPLOC4-216ENST00000574344 PRAM1Q96QH2 718 aa14.08□□□□□ -0.16
NPLOC4-216ENST00000574344 FOXO3O43524 673 aa14.07□□□□□ -0.16
NPLOC4-216ENST00000574344 ADGRB2O60241 1585 aa14.07□□□□□ -0.16
NPLOC4-216ENST00000574344 SIRT1Q96EB6 747 aa14.06□□□□□ -0.16
NPLOC4-216ENST00000574344 TRAK1Q9UPV9 953 aa14.06□□□□□ -0.16
NPLOC4-216ENST00000574344 USP32Q8NFA0 1604 aa14.05□□□□□ -0.16
NPLOC4-216ENST00000574344 ITSN1Q15811 1721 aa14.05□□□□□ -0.16
NPLOC4-216ENST00000574344 KIAA1210Q9ULL0 1709 aa14.05□□□□□ -0.16
NPLOC4-216ENST00000574344 TRIM26Q12899 539 aaPredicted RBP14.05□□□□□ -0.16
NPLOC4-216ENST00000574344 RXRBP28702 533 aa14.04□□□□□ -0.16
NPLOC4-216ENST00000574344 NGLY1Q96IV0 654 aa14.04□□□□□ -0.16
NPLOC4-216ENST00000574344 STAC3Q96MF2 364 aa14.03□□□□□ -0.16
NPLOC4-216ENST00000574344 PCGF6Q9BYE7 350 aa14.03□□□□□ -0.16
NPLOC4-216ENST00000574344 ABCA3Q99758 1704 aa14.02□□□□□ -0.16
NPLOC4-216ENST00000574344 MINK1Q8N4C8 1332 aaPredicted RBP14.02□□□□□ -0.17
NPLOC4-216ENST00000574344 HIRIP3Q9BW71 556 aaPredicted RBP14.02□□□□□ -0.17
NPLOC4-216ENST00000574344 PHF8Q9UPP1 1060 aa14.02□□□□□ -0.17
NPLOC4-216ENST00000574344 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
NPLOC4-216ENST00000574344 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
NPLOC4-216ENST00000574344 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
NPLOC4-216ENST00000574344 ANKARQ7Z5J8 1434 aa14□□□□□ -0.17
NPLOC4-216ENST00000574344 EIF3AQ14152 1382 aaKnown RBP14□□□□□ -0.17
NPLOC4-216ENST00000574344 KRT28Q7Z3Y7 464 aa14□□□□□ -0.17
NPLOC4-216ENST00000574344 QTRT2Q9H974 415 aaKnown RBP14□□□□□ -0.17
NPLOC4-216ENST00000574344 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.99□□□□□ -0.17
NPLOC4-216ENST00000574344 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
NPLOC4-216ENST00000574344 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
NPLOC4-216ENST00000574344 PSME1Q06323 249 aa13.99□□□□□ -0.17
NPLOC4-216ENST00000574344 USP21Q9UK80 565 aa13.99□□□□□ -0.17
NPLOC4-216ENST00000574344 TRPM3Q9HCF6 1732 aaPredicted RBP13.98□□□□□ -0.17
NPLOC4-216ENST00000574344 PLCH1Q4KWH8 1693 aa13.98□□□□□ -0.17
NPLOC4-216ENST00000574344 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
NPLOC4-216ENST00000574344 RBM6P78332 1123 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-216ENST00000574344 LMOD2Q6P5Q4 547 aa13.98□□□□□ -0.17
NPLOC4-216ENST00000574344 PMFBP1Q8TBY8 1022 aa13.98□□□□□ -0.17
NPLOC4-216ENST00000574344 RGS12O14924 1447 aa13.98□□□□□ -0.17
NPLOC4-216ENST00000574344 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.17
NPLOC4-216ENST00000574344 TRPC5Q9UL62 973 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-216ENST00000574344 ALS2Q96Q42 1657 aa13.95□□□□□ -0.18
NPLOC4-216ENST00000574344 WASLO00401 505 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-216ENST00000574344 SBNO1A3KN83 1393 aa13.95□□□□□ -0.18
NPLOC4-216ENST00000574344 ARHGEF10O15013 1369 aa13.95□□□□□ -0.18
NPLOC4-216ENST00000574344 GPRASP1Q5JY77 1395 aa13.95□□□□□ -0.18
NPLOC4-216ENST00000574344 TOPAZ1Q8N9V7 1692 aa13.95□□□□□ -0.18
NPLOC4-216ENST00000574344 ATRNO75882 1429 aa13.94□□□□□ -0.18
NPLOC4-216ENST00000574344 NWD2Q9ULI1 1742 aa13.94□□□□□ -0.18
NPLOC4-216ENST00000574344 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
NPLOC4-216ENST00000574344 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
NPLOC4-216ENST00000574344 ATP7BP35670 1465 aa13.93□□□□□ -0.18
NPLOC4-216ENST00000574344 PRR36Q9H6K5 1346 aa13.92□□□□□ -0.18
NPLOC4-216ENST00000574344 NGDNQ8NEJ9 315 aaKnown RBP13.92□□□□□ -0.18
NPLOC4-216ENST00000574344 BCL9LQ86UU0 1499 aa13.92□□□□□ -0.18
NPLOC4-216ENST00000574344 CRYBG1Q9Y4K1 1723 aa13.91□□□□□ -0.18
NPLOC4-216ENST00000574344 CABLES1Q8TDN4 633 aa13.91□□□□□ -0.18
NPLOC4-216ENST00000574344 UPF1Q92900 1129 aaKnown RBP eCLIP13.91□□□□□ -0.18
NPLOC4-216ENST00000574344 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
NPLOC4-216ENST00000574344 NEUROD1Q13562 356 aa13.9□□□□□ -0.18
NPLOC4-216ENST00000574344 NBPF1Q3BBV0 1214 aa13.9□□□□□ -0.18
NPLOC4-216ENST00000574344 SLIT2O94813 1529 aa13.9□□□□□ -0.19
NPLOC4-216ENST00000574344 SIN3AQ96ST3 1273 aa13.89□□□□□ -0.19
NPLOC4-216ENST00000574344 BRWD3Q6RI45 1802 aa13.89□□□□□ -0.19
NPLOC4-216ENST00000574344 PHRF1Q9P1Y6 1649 aaKnown RBP13.89□□□□□ -0.19
NPLOC4-216ENST00000574344 COL14A1Q05707 1796 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-216ENST00000574344 GLI3P10071 1580 aa13.88□□□□□ -0.19
NPLOC4-216ENST00000574344 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
NPLOC4-216ENST00000574344 NRAPQ86VF7 1730 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms