RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
RPA1-206ENST00000573994 C19orf44Q9H6X5 657 aa14.78□□□□□ -0.04
RPA1-206ENST00000573994 PTCH1Q13635 1447 aa14.76□□□□□ -0.05
RPA1-206ENST00000573994 ADGRL3Q9HAR2 1447 aa14.76□□□□□ -0.05
RPA1-206ENST00000573994 ROBO2Q9HCK4 1378 aa14.76□□□□□ -0.05
RPA1-206ENST00000573994 DCCP43146 1447 aa14.75□□□□□ -0.05
RPA1-206ENST00000573994 ANKRD30BQ9BXX2 1392 aa14.74□□□□□ -0.05
RPA1-206ENST00000573994 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
RPA1-206ENST00000573994 NALCNQ8IZF0 1738 aa14.74□□□□□ -0.05
RPA1-206ENST00000573994 MST1RQ04912 1400 aa14.74□□□□□ -0.05
RPA1-206ENST00000573994 ASXL1Q8IXJ9 1541 aa14.73□□□□□ -0.05
RPA1-206ENST00000573994 PHLPP1O60346 1717 aa14.73□□□□□ -0.05
RPA1-206ENST00000573994 IFT172Q9UG01 1749 aa14.73□□□□□ -0.05
RPA1-206ENST00000573994 PIK3C2GO75747 1445 aa14.73□□□□□ -0.05
RPA1-206ENST00000573994 BRINP3Q76B58 766 aa14.72□□□□□ -0.05
RPA1-206ENST00000573994 COL16A1Q07092 1604 aaPredicted RBP14.72□□□□□ -0.05
RPA1-206ENST00000573994 PRAG1Q86YV5 1406 aa14.72□□□□□ -0.05
RPA1-206ENST00000573994 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
RPA1-206ENST00000573994 AHDC1Q5TGY3 1603 aaPredicted RBP14.7□□□□□ -0.06
RPA1-206ENST00000573994 STK26Q9P289 416 aa14.7□□□□□ -0.06
RPA1-206ENST00000573994 JCADQ9P266 1359 aa14.7□□□□□ -0.06
RPA1-206ENST00000573994 TMEM132EQ6IEE7 984 aa14.69□□□□□ -0.06
RPA1-206ENST00000573994 MYOM2P54296 1465 aa14.69□□□□□ -0.06
RPA1-206ENST00000573994 HRCP23327 699 aa14.68□□□□□ -0.06
RPA1-206ENST00000573994 LRPPRCP42704 1394 aaKnown RBP14.68□□□□□ -0.06
RPA1-206ENST00000573994 NRXN1Q9ULB1 1477 aa14.68□□□□□ -0.06
RPA1-206ENST00000573994 C1orf167Q5SNV9 1468 aa14.67□□□□□ -0.06
RPA1-206ENST00000573994 TECPR2O15040 1411 aa14.66□□□□□ -0.06
RPA1-206ENST00000573994 PLEKHH1Q9ULM0 1364 aa14.66□□□□□ -0.06
RPA1-206ENST00000573994 SOCS7O14512 581 aa14.66□□□□□ -0.06
RPA1-206ENST00000573994 DDX17Q92841 729 aaKnown RBP14.66□□□□□ -0.06
RPA1-206ENST00000573994 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
RPA1-206ENST00000573994 CFAP70Q5T0N1 1121 aa14.65□□□□□ -0.06
RPA1-206ENST00000573994 WAPLQ7Z5K2 1190 aa14.65□□□□□ -0.06
RPA1-206ENST00000573994 LRP6O75581 1613 aa14.65□□□□□ -0.06
RPA1-206ENST00000573994 YTHDC2Q9H6S0 1430 aaKnown RBP14.65□□□□□ -0.06
RPA1-206ENST00000573994 RGS17Q9UGC6 210 aaPredicted RBP14.64□□□□□ -0.07
RPA1-206ENST00000573994 CDC42BPGQ6DT37 1551 aa14.64□□□□□ -0.07
RPA1-206ENST00000573994 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
RPA1-206ENST00000573994 NHSL1Q5SYE7 1610 aa14.63□□□□□ -0.07
RPA1-206ENST00000573994 ABCC11Q96J66 1382 aa14.62□□□□□ -0.07
RPA1-206ENST00000573994 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
RPA1-206ENST00000573994 ORAI2Q96SN7 254 aa14.62□□□□□ -0.07
RPA1-206ENST00000573994 C14orf93Q9H972 538 aaKnown RBP14.62□□□□□ -0.07
RPA1-206ENST00000573994 KDM2AQ9Y2K7 1162 aa14.62□□□□□ -0.07
RPA1-206ENST00000573994 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
RPA1-206ENST00000573994 LAMC1P11047 1609 aa14.61□□□□□ -0.07
RPA1-206ENST00000573994 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
RPA1-206ENST00000573994 DCAF11Q8TEB1 546 aa14.6□□□□□ -0.07
RPA1-206ENST00000573994 SHPRHQ149N8 1683 aa14.6□□□□□ -0.07
RPA1-206ENST00000573994 SPATA31A6Q5VVP1 1343 aa14.6□□□□□ -0.07
RPA1-206ENST00000573994 NUTM2BA6NNL0 878 aaPredicted RBP14.59□□□□□ -0.07
RPA1-206ENST00000573994 NUTM2EB1AL46 878 aaPredicted RBP14.59□□□□□ -0.07
RPA1-206ENST00000573994 MEX3CQ5U5Q3 659 aaKnown RBP14.59□□□□□ -0.07
RPA1-206ENST00000573994 NUTM2AQ8IVF1 878 aaPredicted RBP14.59□□□□□ -0.07
RPA1-206ENST00000573994 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
RPA1-206ENST00000573994 SAFB2Q14151 953 aaKnown RBP eCLIP14.58□□□□□ -0.08
RPA1-206ENST00000573994 POTEAQ6S8J7 498 aa14.58□□□□□ -0.08
RPA1-206ENST00000573994 ADGRB1O14514 1584 aa14.58□□□□□ -0.08
RPA1-206ENST00000573994 ESCO1Q5FWF5 840 aa14.57□□□□□ -0.08
RPA1-206ENST00000573994 PRAM1Q96QH2 718 aa14.57□□□□□ -0.08
RPA1-206ENST00000573994 PNPLA6Q8IY17 1366 aa14.57□□□□□ -0.08
RPA1-206ENST00000573994 STAC3Q96MF2 364 aa14.56□□□□□ -0.08
RPA1-206ENST00000573994 PIP4P2Q8N4L2 257 aa14.55□□□□□ -0.08
RPA1-206ENST00000573994 LRRC59Q96AG4 307 aaKnown RBP14.55□□□□□ -0.08
RPA1-206ENST00000573994 XPCQ01831 940 aaPredicted RBP14.54□□□□□ -0.08
RPA1-206ENST00000573994 TRAK1Q9UPV9 953 aa14.54□□□□□ -0.08
RPA1-206ENST00000573994 DLC1Q96QB1 1528 aa14.54□□□□□ -0.08
RPA1-206ENST00000573994 FMN2Q9NZ56 1722 aa14.53□□□□□ -0.08
RPA1-206ENST00000573994 SOS2Q07890 1332 aaPredicted RBP14.53□□□□□ -0.08
RPA1-206ENST00000573994 POGKQ9P215 609 aa14.53□□□□□ -0.08
RPA1-206ENST00000573994 PXDNQ92626 1479 aa14.52□□□□□ -0.08
RPA1-206ENST00000573994 SIRT1Q96EB6 747 aa14.52□□□□□ -0.09
RPA1-206ENST00000573994 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
RPA1-206ENST00000573994 NPHP3Q7Z494 1330 aa14.51□□□□□ -0.09
RPA1-206ENST00000573994 FOXO3O43524 673 aa14.51□□□□□ -0.09
RPA1-206ENST00000573994 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
RPA1-206ENST00000573994 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
RPA1-206ENST00000573994 AFF2P51816 1311 aa14.49□□□□□ -0.09
RPA1-206ENST00000573994 MINK1Q8N4C8 1332 aaPredicted RBP14.49□□□□□ -0.09
RPA1-206ENST00000573994 ADGRB2O60241 1585 aa14.49□□□□□ -0.09
RPA1-206ENST00000573994 ADAMTS2O95450 1211 aa14.49□□□□□ -0.09
RPA1-206ENST00000573994 C8orf37Q96NL8 207 aa14.49□□□□□ -0.09
RPA1-206ENST00000573994 KIF1AQ12756 1690 aa14.48□□□□□ -0.09
RPA1-206ENST00000573994 ZNF772Q68DY9 489 aaPredicted RBP14.47□□□□□ -0.09
RPA1-206ENST00000573994 SIN3AQ96ST3 1273 aa14.46□□□□□ -0.09
RPA1-206ENST00000573994 PHF8Q9UPP1 1060 aa14.46□□□□□ -0.09
RPA1-206ENST00000573994 USP32Q8NFA0 1604 aa14.45□□□□□ -0.1
RPA1-206ENST00000573994 ANKARQ7Z5J8 1434 aa14.45□□□□□ -0.1
RPA1-206ENST00000573994 ARHGEF28Q8N1W1 1705 aaKnown RBP14.45□□□□□ -0.1
RPA1-206ENST00000573994 COL22A1Q8NFW1 1626 aaPredicted RBP14.44□□□□□ -0.1
RPA1-206ENST00000573994 NEUROD1Q13562 356 aa14.44□□□□□ -0.1
RPA1-206ENST00000573994 PRR36Q9H6K5 1346 aa14.43□□□□□ -0.1
RPA1-206ENST00000573994 TULP4Q9NRJ4 1543 aa14.43□□□□□ -0.1
RPA1-206ENST00000573994 NBPF1Q3BBV0 1214 aa14.43□□□□□ -0.1
RPA1-206ENST00000573994 PMFBP1Q8TBY8 1022 aa14.43□□□□□ -0.1
RPA1-206ENST00000573994 L3MBTL2Q969R5 705 aa14.43□□□□□ -0.1
RPA1-206ENST00000573994 SPATA31A3Q5VYP0 1347 aa14.42□□□□□ -0.1
RPA1-206ENST00000573994 TNS3Q68CZ2 1445 aa14.42□□□□□ -0.1
RPA1-206ENST00000573994 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms