RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 DDX17Q92841 729 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-211ENST00000573212 IQGAP3Q86VI3 1631 aa12.44□□□□□ -0.42
NPLOC4-211ENST00000573212 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
NPLOC4-211ENST00000573212 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
NPLOC4-211ENST00000573212 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-211ENST00000573212 PNPLA6Q8IY17 1366 aa12.42□□□□□ -0.42
NPLOC4-211ENST00000573212 NRXN3Q9Y4C0 1643 aa12.41□□□□□ -0.42
NPLOC4-211ENST00000573212 C8orf37Q96NL8 207 aa12.41□□□□□ -0.42
NPLOC4-211ENST00000573212 SOS2Q07890 1332 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-211ENST00000573212 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-211ENST00000573212 ADGRL3Q9HAR2 1447 aa12.4□□□□□ -0.42
NPLOC4-211ENST00000573212 CAPN15O75808 1086 aa12.4□□□□□ -0.42
NPLOC4-211ENST00000573212 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-211ENST00000573212 NGLY1Q96IV0 654 aa12.39□□□□□ -0.43
NPLOC4-211ENST00000573212 RGS12O14924 1447 aa12.38□□□□□ -0.43
NPLOC4-211ENST00000573212 NHSL1Q5SYE7 1610 aa12.38□□□□□ -0.43
NPLOC4-211ENST00000573212 ITGAEP38570 1179 aa12.38□□□□□ -0.43
NPLOC4-211ENST00000573212 POLA2Q14181 598 aa12.38□□□□□ -0.43
NPLOC4-211ENST00000573212 ORAI2Q96SN7 254 aa12.38□□□□□ -0.43
NPLOC4-211ENST00000573212 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
NPLOC4-211ENST00000573212 ADAMTS2O95450 1211 aa12.37□□□□□ -0.43
NPLOC4-211ENST00000573212 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-211ENST00000573212 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-211ENST00000573212 ROBO2Q9HCK4 1378 aa12.35□□□□□ -0.43
NPLOC4-211ENST00000573212 USP21Q9UK80 565 aa12.35□□□□□ -0.43
NPLOC4-211ENST00000573212 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
NPLOC4-211ENST00000573212 TRPC5Q9UL62 973 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-211ENST00000573212 RPGRIP1LQ68CZ1 1315 aa12.34□□□□□ -0.43
NPLOC4-211ENST00000573212 PTCH1Q13635 1447 aa12.33□□□□□ -0.44
NPLOC4-211ENST00000573212 PRAG1Q86YV5 1406 aa12.33□□□□□ -0.44
NPLOC4-211ENST00000573212 LAMC1P11047 1609 aa12.33□□□□□ -0.44
NPLOC4-211ENST00000573212 ATRNO75882 1429 aa12.31□□□□□ -0.44
NPLOC4-211ENST00000573212 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
NPLOC4-211ENST00000573212 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-211ENST00000573212 SPHKAPQ2M3C7 1700 aa12.3□□□□□ -0.44
NPLOC4-211ENST00000573212 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
NPLOC4-211ENST00000573212 NALCNQ8IZF0 1738 aa12.29□□□□□ -0.44
NPLOC4-211ENST00000573212 ESCO1Q5FWF5 840 aa12.29□□□□□ -0.44
NPLOC4-211ENST00000573212 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
NPLOC4-211ENST00000573212 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
NPLOC4-211ENST00000573212 NAIPQ13075 1403 aa12.28□□□□□ -0.44
NPLOC4-211ENST00000573212 BCL9LQ86UU0 1499 aa12.28□□□□□ -0.44
NPLOC4-211ENST00000573212 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
NPLOC4-211ENST00000573212 FOXO3O43524 673 aa12.27□□□□□ -0.45
NPLOC4-211ENST00000573212 GJD4Q96KN9 370 aaPredicted RBP12.27□□□□□ -0.45
NPLOC4-211ENST00000573212 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
NPLOC4-211ENST00000573212 MYOM2P54296 1465 aa12.27□□□□□ -0.45
NPLOC4-211ENST00000573212 VSIG10Q8N0Z9 540 aa12.26□□□□□ -0.45
NPLOC4-211ENST00000573212 ABCB7O75027 752 aa12.25□□□□□ -0.45
NPLOC4-211ENST00000573212 WAPLQ7Z5K2 1190 aa12.25□□□□□ -0.45
NPLOC4-211ENST00000573212 RRBP1Q9P2E9 1410 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-211ENST00000573212 ADGRF5Q8IZF2 1346 aa12.24□□□□□ -0.45
NPLOC4-211ENST00000573212 COL22A1Q8NFW1 1626 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-211ENST00000573212 PXDNQ92626 1479 aa12.24□□□□□ -0.45
NPLOC4-211ENST00000573212 SRCAPQ6ZRS2 3230 aa12.23□□□□□ -0.45
NPLOC4-211ENST00000573212 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-211ENST00000573212 UNC5CLQ8IV45 518 aa12.23□□□□□ -0.45
NPLOC4-211ENST00000573212 LRPPRCP42704 1394 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-211ENST00000573212 ABCC11Q96J66 1382 aa12.22□□□□□ -0.45
NPLOC4-211ENST00000573212 SPATA31A3Q5VYP0 1347 aa12.22□□□□□ -0.45
NPLOC4-211ENST00000573212 SIRT1Q96EB6 747 aa12.22□□□□□ -0.45
NPLOC4-211ENST00000573212 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-211ENST00000573212 SLIT2O94813 1529 aa12.21□□□□□ -0.46
NPLOC4-211ENST00000573212 TECPR2O15040 1411 aa12.2□□□□□ -0.46
NPLOC4-211ENST00000573212 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
NPLOC4-211ENST00000573212 TMEM132EQ6IEE7 984 aa12.2□□□□□ -0.46
NPLOC4-211ENST00000573212 KRT28Q7Z3Y7 464 aa12.2□□□□□ -0.46
NPLOC4-211ENST00000573212 STK26Q9P289 416 aa12.2□□□□□ -0.46
NPLOC4-211ENST00000573212 KIF1BO60333 1816 aa12.2□□□□□ -0.46
NPLOC4-211ENST00000573212 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
NPLOC4-211ENST00000573212 CDC42BPGQ6DT37 1551 aa12.19□□□□□ -0.46
NPLOC4-211ENST00000573212 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
NPLOC4-211ENST00000573212 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
NPLOC4-211ENST00000573212 RALGAPBQ86X10 1494 aa12.17□□□□□ -0.46
NPLOC4-211ENST00000573212 DSG3P32926 999 aa12.17□□□□□ -0.46
NPLOC4-211ENST00000573212 VPS72Q15906 364 aa12.17□□□□□ -0.46
NPLOC4-211ENST00000573212 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-211ENST00000573212 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-211ENST00000573212 ANKRD30BQ9BXX2 1392 aa12.17□□□□□ -0.46
NPLOC4-211ENST00000573212 DEFB132Q7Z7B7 95 aa12.16□□□□□ -0.46
NPLOC4-211ENST00000573212 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
NPLOC4-211ENST00000573212 C14orf93Q9H972 538 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-211ENST00000573212 GLI3P10071 1580 aa12.15□□□□□ -0.46
NPLOC4-211ENST00000573212 BBXQ8WY36 941 aaPredicted RBP12.15□□□□□ -0.46
NPLOC4-211ENST00000573212 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
NPLOC4-211ENST00000573212 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
NPLOC4-211ENST00000573212 PPLO60437 1756 aa12.15□□□□□ -0.46
NPLOC4-211ENST00000573212 YTHDC2Q9H6S0 1430 aaKnown RBP12.14□□□□□ -0.47
NPLOC4-211ENST00000573212 PSME1Q06323 249 aa12.14□□□□□ -0.47
NPLOC4-211ENST00000573212 CABLES1Q8TDN4 633 aa12.14□□□□□ -0.47
NPLOC4-211ENST00000573212 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
NPLOC4-211ENST00000573212 CCDC144AA2RUR9 1427 aa12.13□□□□□ -0.47
NPLOC4-211ENST00000573212 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
NPLOC4-211ENST00000573212 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
NPLOC4-211ENST00000573212 TAOK2Q9UL54 1235 aa12.12□□□□□ -0.47
NPLOC4-211ENST00000573212 EP400Q96L91 3159 aa12.12□□□□□ -0.47
NPLOC4-211ENST00000573212 SBNO1A3KN83 1393 aa12.12□□□□□ -0.47
NPLOC4-211ENST00000573212 CFAP70Q5T0N1 1121 aa12.11□□□□□ -0.47
NPLOC4-211ENST00000573212 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
NPLOC4-211ENST00000573212 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms