RNA–Protein interactions for RNA: ENST00000572686.1

SPOP-221, Transcript of speckle type BTB/POZ protein, humanhuman

Gene SPOP, Length 2,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-221ENST00000572686 HFM1A2PYH4 1435 aa10.96□□□□□ -0.66
SPOP-221ENST00000572686 ADGRL3Q9HAR2 1447 aa10.96□□□□□ -0.66
SPOP-221ENST00000572686 TRIM52Q96A61 297 aa10.95□□□□□ -0.66
SPOP-221ENST00000572686 SETD5Q9C0A6 1442 aa10.95□□□□□ -0.66
SPOP-221ENST00000572686 MEX3CQ5U5Q3 659 aaKnown RBP10.94□□□□□ -0.66
SPOP-221ENST00000572686 PPLO60437 1756 aa10.94□□□□□ -0.66
SPOP-221ENST00000572686 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
SPOP-221ENST00000572686 POLA2Q14181 598 aa10.93□□□□□ -0.66
SPOP-221ENST00000572686 ZNF772Q68DY9 489 aaPredicted RBP10.93□□□□□ -0.66
SPOP-221ENST00000572686 DDX17Q92841 729 aaKnown RBP10.93□□□□□ -0.66
SPOP-221ENST00000572686 NUTM2BA6NNL0 878 aaPredicted RBP10.92□□□□□ -0.66
SPOP-221ENST00000572686 NUTM2EB1AL46 878 aaPredicted RBP10.92□□□□□ -0.66
SPOP-221ENST00000572686 NUTM2AQ8IVF1 878 aaPredicted RBP10.92□□□□□ -0.66
SPOP-221ENST00000572686 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
SPOP-221ENST00000572686 RPGRIP1LQ68CZ1 1315 aa10.92□□□□□ -0.66
SPOP-221ENST00000572686 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
SPOP-221ENST00000572686 C1orf167Q5SNV9 1468 aa10.91□□□□□ -0.66
SPOP-221ENST00000572686 PRAG1Q86YV5 1406 aa10.91□□□□□ -0.66
SPOP-221ENST00000572686 LRRC59Q96AG4 307 aaKnown RBP10.91□□□□□ -0.66
SPOP-221ENST00000572686 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
SPOP-221ENST00000572686 LAMC1P11047 1609 aa10.91□□□□□ -0.66
SPOP-221ENST00000572686 PNPLA6Q8IY17 1366 aa10.89□□□□□ -0.67
SPOP-221ENST00000572686 ZBTB22O15209 634 aa10.89□□□□□ -0.67
SPOP-221ENST00000572686 AFF2P51816 1311 aa10.89□□□□□ -0.67
SPOP-221ENST00000572686 RXRBP28702 533 aa10.88□□□□□ -0.67
SPOP-221ENST00000572686 ORAI2Q96SN7 254 aa10.88□□□□□ -0.67
SPOP-221ENST00000572686 IFT172Q9UG01 1749 aa10.87□□□□□ -0.67
SPOP-221ENST00000572686 UPF1Q92900 1129 aaKnown RBP eCLIP10.87□□□□□ -0.671e-8■■■■■ 27.6
SPOP-221ENST00000572686 ADGRF5Q8IZF2 1346 aa10.87□□□□□ -0.67
SPOP-221ENST00000572686 CDK12Q9NYV4 1490 aaPredicted RBP10.87□□□□□ -0.67
SPOP-221ENST00000572686 SPATA31E1Q6ZUB1 1445 aa10.86□□□□□ -0.67
SPOP-221ENST00000572686 SOS2Q07890 1332 aaPredicted RBP10.86□□□□□ -0.67
SPOP-221ENST00000572686 CCDC144AA2RUR9 1427 aa10.85□□□□□ -0.67
SPOP-221ENST00000572686 POTEHQ6S545 545 aa10.85□□□□□ -0.67
SPOP-221ENST00000572686 C8orf37Q96NL8 207 aa10.85□□□□□ -0.67
SPOP-221ENST00000572686 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
SPOP-221ENST00000572686 RGL3Q3MIN7 710 aa10.84□□□□□ -0.67
SPOP-221ENST00000572686 CDC42BPGQ6DT37 1551 aa10.84□□□□□ -0.67
SPOP-221ENST00000572686 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
SPOP-221ENST00000572686 QTRT2Q9H974 415 aaKnown RBP10.84□□□□□ -0.67
SPOP-221ENST00000572686 COL22A1Q8NFW1 1626 aaPredicted RBP10.83□□□□□ -0.68
SPOP-221ENST00000572686 ADAMTS2O95450 1211 aa10.83□□□□□ -0.68
SPOP-221ENST00000572686 TECPR2O15040 1411 aa10.83□□□□□ -0.68
SPOP-221ENST00000572686 DHX57Q6P158 1386 aaKnown RBP10.83□□□□□ -0.68
SPOP-221ENST00000572686 ANKRD30BQ9BXX2 1392 aa10.83□□□□□ -0.68
SPOP-221ENST00000572686 KNDC1Q76NI1 1749 aa10.83□□□□□ -0.68
SPOP-221ENST00000572686 WAPLQ7Z5K2 1190 aa10.82□□□□□ -0.68
SPOP-221ENST00000572686 RBM6P78332 1123 aaKnown RBP10.82□□□□□ -0.68
SPOP-221ENST00000572686 NGLY1Q96IV0 654 aa10.82□□□□□ -0.68
SPOP-221ENST00000572686 STK26Q9P289 416 aa10.82□□□□□ -0.68
SPOP-221ENST00000572686 RGS12O14924 1447 aa10.82□□□□□ -0.68
SPOP-221ENST00000572686 LRPPRCP42704 1394 aaKnown RBP10.82□□□□□ -0.68
SPOP-221ENST00000572686 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
SPOP-221ENST00000572686 ESCO1Q5FWF5 840 aa10.81□□□□□ -0.68
SPOP-221ENST00000572686 DIEXFQ68CQ4 756 aaKnown RBP10.81□□□□□ -0.68
SPOP-221ENST00000572686 TMEM132EQ6IEE7 984 aa10.81□□□□□ -0.68
SPOP-221ENST00000572686 ABCC11Q96J66 1382 aa10.81□□□□□ -0.68
SPOP-221ENST00000572686 PXDNQ92626 1479 aa10.81□□□□□ -0.68
SPOP-221ENST00000572686 PIK3C2GO75747 1445 aa10.81□□□□□ -0.68
SPOP-221ENST00000572686 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
SPOP-221ENST00000572686 NPHP3Q7Z494 1330 aa10.8□□□□□ -0.68
SPOP-221ENST00000572686 PLEKHH1Q9ULM0 1364 aa10.8□□□□□ -0.68
SPOP-221ENST00000572686 FMN2Q9NZ56 1722 aa10.79□□□□□ -0.68
SPOP-221ENST00000572686 MARF1Q9Y4F3 1742 aaKnown RBP10.79□□□□□ -0.68
SPOP-221ENST00000572686 MYOM2P54296 1465 aa10.79□□□□□ -0.68
SPOP-221ENST00000572686 FOXO3O43524 673 aa10.79□□□□□ -0.68
SPOP-221ENST00000572686 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
SPOP-221ENST00000572686 YTHDC2Q9H6S0 1430 aaKnown RBP10.79□□□□□ -0.68
SPOP-221ENST00000572686 NUTM2FA1L443 756 aa10.78□□□□□ -0.68
SPOP-221ENST00000572686 XPCQ01831 940 aaPredicted RBP10.78□□□□□ -0.68
SPOP-221ENST00000572686 USP21Q9UK80 565 aa10.78□□□□□ -0.68
SPOP-221ENST00000572686 RGPD8O14715 1765 aaPredicted RBP10.78□□□□□ -0.68
SPOP-221ENST00000572686 C14orf93Q9H972 538 aaKnown RBP10.77□□□□□ -0.69
SPOP-221ENST00000572686 ATRNO75882 1429 aa10.77□□□□□ -0.69
SPOP-221ENST00000572686 NRXN1Q9ULB1 1477 aa10.77□□□□□ -0.69
SPOP-221ENST00000572686 SIRT1Q96EB6 747 aa10.76□□□□□ -0.69
SPOP-221ENST00000572686 TRPC5Q9UL62 973 aaPredicted RBP10.76□□□□□ -0.69
SPOP-221ENST00000572686 KIF1AQ12756 1690 aa10.76□□□□□ -0.69
SPOP-221ENST00000572686 ACIN1Q9UKV3 1341 aaKnown RBP10.76□□□□□ -0.69
SPOP-221ENST00000572686 CFAP70Q5T0N1 1121 aa10.75□□□□□ -0.69
SPOP-221ENST00000572686 BCL9LQ86UU0 1499 aa10.75□□□□□ -0.69
SPOP-221ENST00000572686 RAB3GAP2Q9H2M9 1393 aa10.74□□□□□ -0.69
SPOP-221ENST00000572686 SPATA31A3Q5VYP0 1347 aa10.74□□□□□ -0.69
SPOP-221ENST00000572686 MYT1Q01538 1121 aa10.73□□□□□ -0.69
SPOP-221ENST00000572686 KRT28Q7Z3Y7 464 aa10.73□□□□□ -0.69
SPOP-221ENST00000572686 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.73□□□□□ -0.69
SPOP-221ENST00000572686 EP400Q96L91 3159 aa10.72□□□□□ -0.69
SPOP-221ENST00000572686 ATAD2Q6PL18 1390 aa10.72□□□□□ -0.69
SPOP-221ENST00000572686 PELP1Q8IZL8 1130 aaKnown RBP10.72□□□□□ -0.69
SPOP-221ENST00000572686 DLC1Q96QB1 1528 aa10.71□□□□□ -0.69
SPOP-221ENST00000572686 PRAM1Q96QH2 718 aa10.71□□□□□ -0.69
SPOP-221ENST00000572686 PHF8Q9UPP1 1060 aa10.71□□□□□ -0.69
SPOP-221ENST00000572686 USP32Q8NFA0 1604 aa10.71□□□□□ -0.7
SPOP-221ENST00000572686 SLIT2O94813 1529 aa10.71□□□□□ -0.7
SPOP-221ENST00000572686 SAFB2Q14151 953 aaKnown RBP eCLIP10.7□□□□□ -0.7
SPOP-221ENST00000572686 GJD4Q96KN9 370 aaPredicted RBP10.7□□□□□ -0.7
SPOP-221ENST00000572686 ADGRB1O14514 1584 aa10.7□□□□□ -0.7
SPOP-221ENST00000572686 GLI3P10071 1580 aa10.7□□□□□ -0.7
SPOP-221ENST00000572686 TNS3Q68CZ2 1445 aa10.69□□□□□ -0.7
SPOP-221ENST00000572686 ABCA3Q99758 1704 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms