RNA–Protein interactions for RNA: ENST00000572686.1

SPOP-221, Transcript of speckle type BTB/POZ protein, humanhuman

Gene SPOP, Length 2,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-221ENST00000572686 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
SPOP-221ENST00000572686 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
SPOP-221ENST00000572686 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
SPOP-221ENST00000572686 ABCC9O60706 1549 aa16.41■□□□□ 0.22
SPOP-221ENST00000572686 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
SPOP-221ENST00000572686 SENP3Q9H4L4 574 aaPredicted RBP16.27■□□□□ 0.2
SPOP-221ENST00000572686 PHF23Q9BUL5 403 aaPredicted RBP16.08■□□□□ 0.16
SPOP-221ENST00000572686 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
SPOP-221ENST00000572686 NACADO15069 1562 aa15.5■□□□□ 0.07
SPOP-221ENST00000572686 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
SPOP-221ENST00000572686 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
SPOP-221ENST00000572686 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
SPOP-221ENST00000572686 MYO15BQ96JP2 1530 aa15.29■□□□□ 0.04
SPOP-221ENST00000572686 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
SPOP-221ENST00000572686 FOXD1Q16676 465 aa15.2■□□□□ 0.02
SPOP-221ENST00000572686 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
SPOP-221ENST00000572686 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
SPOP-221ENST00000572686 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0.01
SPOP-221ENST00000572686 SCRIBQ14160 1630 aa14.94□□□□□ -0.02
SPOP-221ENST00000572686 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
SPOP-221ENST00000572686 CC2D2AQ9P2K1 1620 aa14.83□□□□□ -0.03
SPOP-221ENST00000572686 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
SPOP-221ENST00000572686 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
SPOP-221ENST00000572686 PLPPR3Q6T4P5 718 aa14.48□□□□□ -0.09
SPOP-221ENST00000572686 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
SPOP-221ENST00000572686 ATAD2BQ9ULI0 1458 aa14.27□□□□□ -0.13
SPOP-221ENST00000572686 SMARCA4P51532 1647 aa14.25□□□□□ -0.13
SPOP-221ENST00000572686 PPP6R1Q9UPN7 881 aa14.22□□□□□ -0.13
SPOP-221ENST00000572686 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
SPOP-221ENST00000572686 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
SPOP-221ENST00000572686 MSH5O43196 834 aa14.18□□□□□ -0.14
SPOP-221ENST00000572686 PIAS4Q8N2W9 510 aaPredicted RBP14.18□□□□□ -0.14
SPOP-221ENST00000572686 BAZ1AQ9NRL2 1556 aaPredicted RBP14.17□□□□□ -0.14
SPOP-221ENST00000572686 ADRA2BP18089 450 aa14.17□□□□□ -0.14
SPOP-221ENST00000572686 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
SPOP-221ENST00000572686 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
SPOP-221ENST00000572686 CUX2O14529 1486 aa14.14□□□□□ -0.15
SPOP-221ENST00000572686 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
SPOP-221ENST00000572686 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
SPOP-221ENST00000572686 NESP48681 1621 aa14.1□□□□□ -0.15
SPOP-221ENST00000572686 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.16
SPOP-221ENST00000572686 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
SPOP-221ENST00000572686 THOC2Q8NI27 1593 aaKnown RBP13.97□□□□□ -0.17
SPOP-221ENST00000572686 KIF21AQ7Z4S6 1674 aa13.93□□□□□ -0.18
SPOP-221ENST00000572686 WIZO95785 1651 aa13.92□□□□□ -0.18
SPOP-221ENST00000572686 PDS5BQ9NTI5 1447 aa13.89□□□□□ -0.19
SPOP-221ENST00000572686 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
SPOP-221ENST00000572686 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
SPOP-221ENST00000572686 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
SPOP-221ENST00000572686 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
SPOP-221ENST00000572686 WDR62O43379 1518 aa13.76□□□□□ -0.21
SPOP-221ENST00000572686 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
SPOP-221ENST00000572686 TOP2AP11388 1531 aaKnown RBP13.72□□□□□ -0.21
SPOP-221ENST00000572686 CFTRP13569 1480 aa13.71□□□□□ -0.21
SPOP-221ENST00000572686 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
SPOP-221ENST00000572686 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
SPOP-221ENST00000572686 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
SPOP-221ENST00000572686 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
SPOP-221ENST00000572686 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
SPOP-221ENST00000572686 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
SPOP-221ENST00000572686 TOPBP1Q92547 1522 aa13.46□□□□□ -0.25
SPOP-221ENST00000572686 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
SPOP-221ENST00000572686 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
SPOP-221ENST00000572686 ABCC8Q09428 1581 aa13.42□□□□□ -0.26
SPOP-221ENST00000572686 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
SPOP-221ENST00000572686 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
SPOP-221ENST00000572686 TARBP1Q13395 1621 aaKnown RBP13.36□□□□□ -0.27
SPOP-221ENST00000572686 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
SPOP-221ENST00000572686 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
SPOP-221ENST00000572686 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
SPOP-221ENST00000572686 AQRO60306 1485 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■■□□□ 11.4
SPOP-221ENST00000572686 POLA1P09884 1462 aaPredicted RBP13.32□□□□□ -0.28
SPOP-221ENST00000572686 CHD1O14646 1710 aa13.3□□□□□ -0.28
SPOP-221ENST00000572686 ARHGEF11O15085 1522 aa13.28□□□□□ -0.28
SPOP-221ENST00000572686 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.28
SPOP-221ENST00000572686 SOGA1O94964 1423 aa13.25□□□□□ -0.29
SPOP-221ENST00000572686 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
SPOP-221ENST00000572686 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
SPOP-221ENST00000572686 CUX1P39880 1505 aa13.23□□□□□ -0.29
SPOP-221ENST00000572686 FBLN2P98095 1184 aa13.21□□□□□ -0.29
SPOP-221ENST00000572686 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
SPOP-221ENST00000572686 SNAPC4Q5SXM2 1469 aa13.18□□□□□ -0.3
SPOP-221ENST00000572686 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
SPOP-221ENST00000572686 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
SPOP-221ENST00000572686 GRIN2BQ13224 1484 aa13.14□□□□□ -0.31
SPOP-221ENST00000572686 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
SPOP-221ENST00000572686 SUPT5HO00267 1087 aaKnown RBP13.13□□□□□ -0.31
SPOP-221ENST00000572686 CLASP1Q7Z460 1538 aa13.13□□□□□ -0.31
SPOP-221ENST00000572686 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
SPOP-221ENST00000572686 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
SPOP-221ENST00000572686 SYNJ1O43426 1573 aa13.1□□□□□ -0.31
SPOP-221ENST00000572686 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
SPOP-221ENST00000572686 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
SPOP-221ENST00000572686 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
SPOP-221ENST00000572686 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
SPOP-221ENST00000572686 BIVM-ERCC5R4GMW8 1640 aa13.02□□□□□ -0.32
SPOP-221ENST00000572686 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
SPOP-221ENST00000572686 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
SPOP-221ENST00000572686 WRNQ14191 1432 aaPredicted RBP eCLIP13.01□□□□□ -0.33
SPOP-221ENST00000572686 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms