RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ECM2O94769 699 aaPredicted RBP8.75□□□□□ -1.01
SMG1-217ENST00000569764 ADGBQ8N7X0 1667 aa8.75□□□□□ -1.01
SMG1-217ENST00000569764 ARHGEF12Q9NZN5 1544 aa8.75□□□□□ -1.01
SMG1-217ENST00000569764 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
SMG1-217ENST00000569764 PREX2Q70Z35 1606 aa8.75□□□□□ -1.01
SMG1-217ENST00000569764 PZPP20742 1482 aa8.75□□□□□ -1.01
SMG1-217ENST00000569764 ROCK1Q13464 1354 aa8.74□□□□□ -1.01
SMG1-217ENST00000569764 WDR70Q9NW82 654 aa8.74□□□□□ -1.01
SMG1-217ENST00000569764 NBPF8Q3BBV2 869 aa8.74□□□□□ -1.01
SMG1-217ENST00000569764 NBPF14Q5TI25 921 aa8.74□□□□□ -1.01
SMG1-217ENST00000569764 FTSJ3Q8IY81 847 aaKnown RBP8.74□□□□□ -1.01
SMG1-217ENST00000569764 PTPRTO14522 1441 aa8.74□□□□□ -1.01
SMG1-217ENST00000569764 PTPRMP28827 1452 aa8.74□□□□□ -1.01
SMG1-217ENST00000569764 PPP1R1BQ9UD71 204 aaPredicted RBP8.73□□□□□ -1.01
SMG1-217ENST00000569764 KCNA6P17658 529 aa8.73□□□□□ -1.01
SMG1-217ENST00000569764 YTHDC1Q96MU7 727 aaKnown RBP8.73□□□□□ -1.01
SMG1-217ENST00000569764 CSB-PGBD3P0DP91 1061 aa8.73□□□□□ -1.01
SMG1-217ENST00000569764 WASHC2AQ641Q2 1341 aa8.72□□□□□ -1.01
SMG1-217ENST00000569764 RPRD2Q5VT52 1461 aaKnown RBP8.72□□□□□ -1.01
SMG1-217ENST00000569764 C19orf44Q9H6X5 657 aa8.72□□□□□ -1.01
SMG1-217ENST00000569764 ADGRL2O95490 1459 aa8.72□□□□□ -1.01
SMG1-217ENST00000569764 SETQ01105 290 aaPredicted RBP8.72□□□□□ -1.01
SMG1-217ENST00000569764 NCKAP5LQ9HCH0 1330 aa8.72□□□□□ -1.01
SMG1-217ENST00000569764 SYCP2Q9BX26 1530 aa8.71□□□□□ -1.01
SMG1-217ENST00000569764 ANKRD30BQ9BXX2 1392 aa8.71□□□□□ -1.02
SMG1-217ENST00000569764 BRD1O95696 1058 aa8.71□□□□□ -1.02
SMG1-217ENST00000569764 ZRANB1Q9UGI0 708 aa8.71□□□□□ -1.02
SMG1-217ENST00000569764 NLRP1Q9C000 1473 aa8.7□□□□□ -1.02
SMG1-217ENST00000569764 MLH3Q9UHC1 1453 aa8.7□□□□□ -1.02
SMG1-217ENST00000569764 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
SMG1-217ENST00000569764 MYO5CQ9NQX4 1742 aa8.69□□□□□ -1.02
SMG1-217ENST00000569764 PAK3O75914 559 aaPredicted RBP8.69□□□□□ -1.02
SMG1-217ENST00000569764 DNAJC2Q99543 621 aaKnown RBP8.69□□□□□ -1.02
SMG1-217ENST00000569764 EIF4G2P78344 907 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMG1-217ENST00000569764 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
SMG1-217ENST00000569764 NPHP3Q7Z494 1330 aa8.68□□□□□ -1.02
SMG1-217ENST00000569764 RXRBP28702 533 aa8.68□□□□□ -1.02
SMG1-217ENST00000569764 L3MBTL2Q969R5 705 aa8.68□□□□□ -1.02
SMG1-217ENST00000569764 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
SMG1-217ENST00000569764 LAS1LQ9Y4W2 734 aaKnown RBP8.68□□□□□ -1.02
SMG1-217ENST00000569764 BAG6P46379 1132 aa8.68□□□□□ -1.02
SMG1-217ENST00000569764 VASPP50552 380 aaPredicted RBP8.68□□□□□ -1.02
SMG1-217ENST00000569764 CNGB1Q14028 1251 aaPredicted RBP8.68□□□□□ -1.02
SMG1-217ENST00000569764 RGL3Q3MIN7 710 aa8.68□□□□□ -1.02
SMG1-217ENST00000569764 HDGFL2Q7Z4V5 671 aaPredicted RBP8.68□□□□□ -1.02
SMG1-217ENST00000569764 ARHGEF5Q12774 1597 aa8.68□□□□□ -1.02
SMG1-217ENST00000569764 FOSBP53539 338 aa8.68□□□□□ -1.02
SMG1-217ENST00000569764 PDE3BQ13370 1112 aa8.68□□□□□ -1.02
SMG1-217ENST00000569764 RGL2O15211 777 aa8.67□□□□□ -1.02
SMG1-217ENST00000569764 ANKRD50Q9ULJ7 1429 aa8.67□□□□□ -1.02
SMG1-217ENST00000569764 MCCP23508 829 aa8.67□□□□□ -1.02
SMG1-217ENST00000569764 SETD1BQ9UPS6 1966 aaKnown RBP8.67□□□□□ -1.02
SMG1-217ENST00000569764 TONSLQ96HA7 1378 aa8.67□□□□□ -1.02
SMG1-217ENST00000569764 SOX12O15370 315 aa8.66□□□□□ -1.02
SMG1-217ENST00000569764 TMX4Q9H1E5 349 aaPredicted RBP8.66□□□□□ -1.02
SMG1-217ENST00000569764 SHANK2Q9UPX8 1470 aa8.66□□□□□ -1.02
SMG1-217ENST00000569764 NPHP4O75161 1426 aaPredicted RBP8.66□□□□□ -1.02
SMG1-217ENST00000569764 MKRN3Q13064 507 aaKnown RBP8.65□□□□□ -1.02
SMG1-217ENST00000569764 DDX10Q13206 875 aaKnown RBP8.65□□□□□ -1.02
SMG1-217ENST00000569764 SLC26A8Q96RN1 970 aa8.65□□□□□ -1.02
SMG1-217ENST00000569764 LOC102724159A0A0B4J2E5 919 aa8.65□□□□□ -1.03
SMG1-217ENST00000569764 PWP2Q15269 919 aaKnown RBP8.65□□□□□ -1.03
SMG1-217ENST00000569764 RNF216Q9NWF9 866 aaPredicted RBP8.65□□□□□ -1.03
SMG1-217ENST00000569764 SRPK2P78362 688 aaKnown RBP8.64□□□□□ -1.03
SMG1-217ENST00000569764 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
SMG1-217ENST00000569764 STK26Q9P289 416 aa8.64□□□□□ -1.03
SMG1-217ENST00000569764 HSP90AB4PQ58FF6 505 aa8.64□□□□□ -1.03
SMG1-217ENST00000569764 SPATA31A6Q5VVP1 1343 aa8.64□□□□□ -1.03
SMG1-217ENST00000569764 TRPC5Q9UL62 973 aaPredicted RBP8.64□□□□□ -1.03
SMG1-217ENST00000569764 ESCO1Q5FWF5 840 aa8.63□□□□□ -1.03
SMG1-217ENST00000569764 SOCS7O14512 581 aa8.63□□□□□ -1.03
SMG1-217ENST00000569764 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
SMG1-217ENST00000569764 AGLP35573 1532 aa8.63□□□□□ -1.03
SMG1-217ENST00000569764 ABCC1P33527 1531 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 CCDC144AA2RUR9 1427 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 NPHP1O15259 732 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 TMTC2Q8N394 836 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 PLCD3Q8N3E9 789 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 TERF2IPQ9NYB0 399 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 A2ML1A8K2U0 1454 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 APPP05067 770 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 SLAIN2Q9P270 581 aa8.62□□□□□ -1.03
SMG1-217ENST00000569764 JCADQ9P266 1359 aa8.61□□□□□ -1.03
SMG1-217ENST00000569764 PLA2R1Q13018 1463 aa8.61□□□□□ -1.03
SMG1-217ENST00000569764 EXOC8Q8IYI6 725 aa8.61□□□□□ -1.03
SMG1-217ENST00000569764 MAST1Q9Y2H9 1570 aa8.61□□□□□ -1.03
SMG1-217ENST00000569764 PIK3R4Q99570 1358 aa8.61□□□□□ -1.03
SMG1-217ENST00000569764 KDM5DQ9BY66 1539 aa8.61□□□□□ -1.03
SMG1-217ENST00000569764 HSPA5P11021 654 aaKnown RBP8.6□□□□□ -1.03
SMG1-217ENST00000569764 AMOTL2Q9Y2J4 779 aa8.6□□□□□ -1.03
SMG1-217ENST00000569764 NLRP13Q86W25 1043 aa8.6□□□□□ -1.03
SMG1-217ENST00000569764 ABCA9Q8IUA7 1624 aa8.6□□□□□ -1.03
SMG1-217ENST00000569764 IQSEC2Q5JU85 1478 aa8.6□□□□□ -1.03
SMG1-217ENST00000569764 CLUAP1Q96AJ1 413 aa8.6□□□□□ -1.03
SMG1-217ENST00000569764 PRDM11Q9NQV5 511 aa8.6□□□□□ -1.03
SMG1-217ENST00000569764 ARHGEF40Q8TER5 1519 aa8.59□□□□□ -1.03
SMG1-217ENST00000569764 PLXNC1O60486 1568 aa8.59□□□□□ -1.03
SMG1-217ENST00000569764 MAFGO15525 162 aa8.59□□□□□ -1.03
SMG1-217ENST00000569764 MARCH6O60337 910 aa8.59□□□□□ -1.03
SMG1-217ENST00000569764 ERBINQ96RT1 1412 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms