RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
USB1-214ENST00000568848 ATRNO75882 1429 aa22.52■■□□□ 1.2
USB1-214ENST00000568848 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
USB1-214ENST00000568848 WAPLQ7Z5K2 1190 aa22.52■■□□□ 1.2
USB1-214ENST00000568848 ADGRF5Q8IZF2 1346 aa22.52■■□□□ 1.2
USB1-214ENST00000568848 PLEKHH1Q9ULM0 1364 aa22.51■■□□□ 1.19
USB1-214ENST00000568848 MYOM2P54296 1465 aa22.51■■□□□ 1.19
USB1-214ENST00000568848 PXDNQ92626 1479 aa22.51■■□□□ 1.19
USB1-214ENST00000568848 FOXO3O43524 673 aa22.5■■□□□ 1.19
USB1-214ENST00000568848 PLEKHG5O94827 1062 aa22.5■■□□□ 1.19
USB1-214ENST00000568848 SLC4A1APQ9BWU0 796 aaKnown RBP22.5■■□□□ 1.19
USB1-214ENST00000568848 TRPC5Q9UL62 973 aaPredicted RBP22.5■■□□□ 1.19
USB1-214ENST00000568848 ATAD2Q6PL18 1390 aa22.5■■□□□ 1.19
USB1-214ENST00000568848 FNBP4Q8N3X1 1017 aaPredicted RBP22.49■■□□□ 1.19
USB1-214ENST00000568848 HFM1A2PYH4 1435 aa22.48■■□□□ 1.19
USB1-214ENST00000568848 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
USB1-214ENST00000568848 CDC42BPGQ6DT37 1551 aa22.47■■□□□ 1.19
USB1-214ENST00000568848 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
USB1-214ENST00000568848 TMEM132EQ6IEE7 984 aa22.47■■□□□ 1.19
USB1-214ENST00000568848 PRAG1Q86YV5 1406 aa22.47■■□□□ 1.19
USB1-214ENST00000568848 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.19
USB1-214ENST00000568848 RPGRIP1LQ68CZ1 1315 aa22.43■■□□□ 1.18
USB1-214ENST00000568848 NPHP3Q7Z494 1330 aa22.42■■□□□ 1.18
USB1-214ENST00000568848 GLI3P10071 1580 aa22.4■■□□□ 1.18
USB1-214ENST00000568848 IFT172Q9UG01 1749 aa22.4■■□□□ 1.18
USB1-214ENST00000568848 RGPD8O14715 1765 aaPredicted RBP22.38■■□□□ 1.17
USB1-214ENST00000568848 FMN2Q9NZ56 1722 aa22.38■■□□□ 1.17
USB1-214ENST00000568848 CABLES1Q8TDN4 633 aa22.38■■□□□ 1.17
USB1-214ENST00000568848 GJD4Q96KN9 370 aaPredicted RBP22.38■■□□□ 1.17
USB1-214ENST00000568848 BRWD3Q6RI45 1802 aa22.37■■□□□ 1.17
USB1-214ENST00000568848 SPATA31E1Q6ZUB1 1445 aa22.37■■□□□ 1.17
USB1-214ENST00000568848 LRPPRCP42704 1394 aaKnown RBP22.37■■□□□ 1.17
USB1-214ENST00000568848 RALGAPBQ86X10 1494 aa22.36■■□□□ 1.17
USB1-214ENST00000568848 TECPR2O15040 1411 aa22.35■■□□□ 1.17
USB1-214ENST00000568848 CCDC144AA2RUR9 1427 aa22.34■■□□□ 1.17
USB1-214ENST00000568848 DEFB132Q7Z7B7 95 aa22.34■■□□□ 1.17
USB1-214ENST00000568848 ZRANB1Q9UGI0 708 aa22.34■■□□□ 1.17
USB1-214ENST00000568848 KNDC1Q76NI1 1749 aa22.34■■□□□ 1.17
USB1-214ENST00000568848 SAFB2Q14151 953 aaKnown RBP eCLIP22.33■■□□□ 1.17
USB1-214ENST00000568848 SPATA31A3Q5VYP0 1347 aa22.32■■□□□ 1.16
USB1-214ENST00000568848 SLIT2O94813 1529 aa22.32■■□□□ 1.16
USB1-214ENST00000568848 USP32Q8NFA0 1604 aa22.32■■□□□ 1.16
USB1-214ENST00000568848 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.32■■□□□ 1.16
USB1-214ENST00000568848 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
USB1-214ENST00000568848 YTHDC2Q9H6S0 1430 aaKnown RBP22.31■■□□□ 1.16
USB1-214ENST00000568848 KRT28Q7Z3Y7 464 aa22.31■■□□□ 1.16
USB1-214ENST00000568848 UNC5CLQ8IV45 518 aa22.31■■□□□ 1.16
USB1-214ENST00000568848 ABCC11Q96J66 1382 aa22.29■■□□□ 1.16
USB1-214ENST00000568848 MPHOSPH9Q99550 1183 aa22.29■■□□□ 1.16
USB1-214ENST00000568848 KIF1AQ12756 1690 aa22.28■■□□□ 1.16
USB1-214ENST00000568848 PLCH1Q4KWH8 1693 aa22.28■■□□□ 1.16
USB1-214ENST00000568848 LMOD2Q6P5Q4 547 aa22.27■■□□□ 1.16
USB1-214ENST00000568848 ABCA3Q99758 1704 aa22.27■■□□□ 1.16
USB1-214ENST00000568848 CFAP70Q5T0N1 1121 aa22.26■■□□□ 1.15
USB1-214ENST00000568848 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
USB1-214ENST00000568848 SEPT12Q8IYM1 358 aa22.25■■□□□ 1.15
USB1-214ENST00000568848 TNS3Q68CZ2 1445 aa22.24■■□□□ 1.15
USB1-214ENST00000568848 HAP1P54257 671 aaPredicted RBP22.24■■□□□ 1.15
USB1-214ENST00000568848 PMFBP1Q8TBY8 1022 aa22.24■■□□□ 1.15
USB1-214ENST00000568848 PHF8Q9UPP1 1060 aa22.24■■□□□ 1.15
USB1-214ENST00000568848 CCDC9Q9Y3X0 531 aaKnown RBP22.24■■□□□ 1.15
USB1-214ENST00000568848 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
USB1-214ENST00000568848 PRAM1Q96QH2 718 aa22.22■■□□□ 1.15
USB1-214ENST00000568848 FAM182BQ5T319 152 aa22.19■■□□□ 1.14
USB1-214ENST00000568848 HIRIP3Q9BW71 556 aaPredicted RBP22.19■■□□□ 1.14
USB1-214ENST00000568848 NRXN1Q9ULB1 1477 aa22.18■■□□□ 1.14
USB1-214ENST00000568848 PSDA5PKW4 1024 aaPredicted RBP22.18■■□□□ 1.14
USB1-214ENST00000568848 CCDC125Q86Z20 511 aa22.18■■□□□ 1.14
USB1-214ENST00000568848 C14orf93Q9H972 538 aaKnown RBP22.18■■□□□ 1.14
USB1-214ENST00000568848 A0A0G2JS52 829 aa22.17■■□□□ 1.14
USB1-214ENST00000568848 FAM83GA6ND36 823 aa22.17■■□□□ 1.14
USB1-214ENST00000568848 MYT1Q01538 1121 aa22.17■■□□□ 1.14
USB1-214ENST00000568848 VPS72Q15906 364 aa22.17■■□□□ 1.14
USB1-214ENST00000568848 NRAPQ86VF7 1730 aa22.16■■□□□ 1.14
USB1-214ENST00000568848 PSME1Q06323 249 aa22.15■■□□□ 1.14
USB1-214ENST00000568848 NWD2Q9ULI1 1742 aa22.14■■□□□ 1.14
USB1-214ENST00000568848 FAM98CQ17RN3 349 aaKnown RBP22.14■■□□□ 1.13
USB1-214ENST00000568848 KRT27Q7Z3Y8 459 aa22.14■■□□□ 1.13
USB1-214ENST00000568848 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.13
USB1-214ENST00000568848 PRR36Q9H6K5 1346 aa22.13■■□□□ 1.13
USB1-214ENST00000568848 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
USB1-214ENST00000568848 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
USB1-214ENST00000568848 MINK1Q8N4C8 1332 aaPredicted RBP22.12■■□□□ 1.13
USB1-214ENST00000568848 POGKQ9P215 609 aa22.11■■□□□ 1.13
USB1-214ENST00000568848 TRAK1Q9UPV9 953 aa22.11■■□□□ 1.13
USB1-214ENST00000568848 SF3B2Q13435 895 aaKnown RBP22.1■■□□□ 1.13
USB1-214ENST00000568848 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
USB1-214ENST00000568848 SIRT1Q96EB6 747 aa22.09■■□□□ 1.13
USB1-214ENST00000568848 ADGRB1O14514 1584 aa22.08■■□□□ 1.13
USB1-214ENST00000568848 ALS2Q96Q42 1657 aa22.08■■□□□ 1.13
USB1-214ENST00000568848 ONECUT3O60422 494 aaPredicted RBP22.08■■□□□ 1.13
USB1-214ENST00000568848 ARHGEF10O15013 1369 aa22.08■■□□□ 1.12
USB1-214ENST00000568848 EN1Q05925 392 aaPredicted RBP22.06■■□□□ 1.12
USB1-214ENST00000568848 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
USB1-214ENST00000568848 ADGRB2O60241 1585 aa22.06■■□□□ 1.12
USB1-214ENST00000568848 DLC1Q96QB1 1528 aa22.06■■□□□ 1.12
USB1-214ENST00000568848 CRYBG1Q9Y4K1 1723 aa22.05■■□□□ 1.12
USB1-214ENST00000568848 ANKARQ7Z5J8 1434 aa22.04■■□□□ 1.12
USB1-214ENST00000568848 LRP5O75197 1615 aa22.03■■□□□ 1.12
USB1-214ENST00000568848 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms