RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
FANCA-230ENST00000568369 VPS37CA5D8V6 355 aaPredicted RBP12.91□□□□□ -0.34
FANCA-230ENST00000568369 DDX58O95786 925 aaKnown RBP12.91□□□□□ -0.34
FANCA-230ENST00000568369 GOLGA6L1Q8N7Z2 621 aa12.91□□□□□ -0.34
FANCA-230ENST00000568369 ERBINQ96RT1 1412 aa12.91□□□□□ -0.34
FANCA-230ENST00000568369 HECW1Q76N89 1606 aa12.9□□□□□ -0.34
FANCA-230ENST00000568369 ERC2O15083 957 aa12.9□□□□□ -0.34
FANCA-230ENST00000568369 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
FANCA-230ENST00000568369 SLC12A5Q9H2X9 1139 aa12.9□□□□□ -0.34
FANCA-230ENST00000568369 FAM13BQ9NYF5 915 aa12.9□□□□□ -0.34
FANCA-230ENST00000568369 TOPBP1Q92547 1522 aa12.9□□□□□ -0.34
FANCA-230ENST00000568369 G3BP1Q13283 466 aaKnown RBP eCLIP12.9□□□□□ -0.34
FANCA-230ENST00000568369 PRKAR2BP31323 418 aa12.9□□□□□ -0.34
FANCA-230ENST00000568369 AMER1Q5JTC6 1135 aaPredicted RBP12.9□□□□□ -0.34
FANCA-230ENST00000568369 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
FANCA-230ENST00000568369 TNNT3P45378 269 aaPredicted RBP12.89□□□□□ -0.35
FANCA-230ENST00000568369 HMGXB3Q12766 1538 aa12.89□□□□□ -0.35
FANCA-230ENST00000568369 RABEP1Q15276 862 aa12.89□□□□□ -0.35
FANCA-230ENST00000568369 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
FANCA-230ENST00000568369 MBD3O95983 291 aa12.89□□□□□ -0.35
FANCA-230ENST00000568369 CREBRFQ8IUR6 639 aa12.89□□□□□ -0.35
FANCA-230ENST00000568369 GNAI3P08754 354 aa12.88□□□□□ -0.35
FANCA-230ENST00000568369 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
FANCA-230ENST00000568369 C11orf95C9JLR9 678 aaPredicted RBP12.88□□□□□ -0.35
FANCA-230ENST00000568369 MCM2P49736 904 aa12.88□□□□□ -0.35
FANCA-230ENST00000568369 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
FANCA-230ENST00000568369 UBTFL1P0CB47 393 aaPredicted RBP12.87□□□□□ -0.35
FANCA-230ENST00000568369 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
FANCA-230ENST00000568369 PLEKHH2Q8IVE3 1493 aa12.87□□□□□ -0.35
FANCA-230ENST00000568369 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
FANCA-230ENST00000568369 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
FANCA-230ENST00000568369 ATF7IPQ6VMQ6 1270 aa12.87□□□□□ -0.35
FANCA-230ENST00000568369 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
FANCA-230ENST00000568369 CPLX1O14810 134 aa12.87□□□□□ -0.35
FANCA-230ENST00000568369 NOB1Q9ULX3 412 aaKnown RBP12.87□□□□□ -0.35
FANCA-230ENST00000568369 NEK4P51957 841 aa12.86□□□□□ -0.35
FANCA-230ENST00000568369 SLFN5Q08AF3 891 aa12.86□□□□□ -0.35
FANCA-230ENST00000568369 CAVIN1Q6NZI2 390 aaKnown RBP12.86□□□□□ -0.35
FANCA-230ENST00000568369 SYNE3Q6ZMZ3 975 aa12.86□□□□□ -0.35
FANCA-230ENST00000568369 ZNF592Q92610 1267 aa12.86□□□□□ -0.35
FANCA-230ENST00000568369 AKAP17AQ02040 695 aaKnown RBP12.85□□□□□ -0.35
FANCA-230ENST00000568369 SASS6Q6UVJ0 657 aa12.85□□□□□ -0.35
FANCA-230ENST00000568369 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
FANCA-230ENST00000568369 TPD52L1Q16890 204 aaPredicted RBP12.85□□□□□ -0.35
FANCA-230ENST00000568369 NOC3LQ8WTT2 800 aaKnown RBP12.85□□□□□ -0.35
FANCA-230ENST00000568369 EPRSP07814 1512 aaKnown RBP12.85□□□□□ -0.35
FANCA-230ENST00000568369 MSH5O43196 834 aa12.85□□□□□ -0.35
FANCA-230ENST00000568369 CLSTN1O94985 981 aa12.85□□□□□ -0.35
FANCA-230ENST00000568369 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
FANCA-230ENST00000568369 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
FANCA-230ENST00000568369 TPM1P09493 284 aa12.84□□□□□ -0.35
FANCA-230ENST00000568369 PCF11O94913 1555 aaKnown RBP12.84□□□□□ -0.35
FANCA-230ENST00000568369 TRIM29Q14134 588 aa12.84□□□□□ -0.35
FANCA-230ENST00000568369 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
FANCA-230ENST00000568369 CCDC73Q6ZRK6 1079 aa12.84□□□□□ -0.35
FANCA-230ENST00000568369 CLASRPQ8N2M8 674 aaKnown RBP12.84□□□□□ -0.35
FANCA-230ENST00000568369 C1orf115Q9H7X2 142 aa12.84□□□□□ -0.35
FANCA-230ENST00000568369 NESP48681 1621 aa12.84□□□□□ -0.35
FANCA-230ENST00000568369 GTF2E1P29083 439 aaPredicted RBP12.83□□□□□ -0.36
FANCA-230ENST00000568369 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
FANCA-230ENST00000568369 CNTROBQ8N137 903 aa12.83□□□□□ -0.36
FANCA-230ENST00000568369 TRDNQ13061 729 aa12.83□□□□□ -0.36
FANCA-230ENST00000568369 CCDC30Q5VVM6 783 aa12.83□□□□□ -0.36
FANCA-230ENST00000568369 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.36
FANCA-230ENST00000568369 PES1O00541 588 aaKnown RBP12.82□□□□□ -0.36
FANCA-230ENST00000568369 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
FANCA-230ENST00000568369 GAS2L2Q8NHY3 880 aa12.82□□□□□ -0.36
FANCA-230ENST00000568369 R3HCC1Q9Y3T6 440 aaKnown RBP12.82□□□□□ -0.36
FANCA-230ENST00000568369 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
FANCA-230ENST00000568369 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
FANCA-230ENST00000568369 CCDC173Q0VFZ6 552 aa12.82□□□□□ -0.36
FANCA-230ENST00000568369 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
FANCA-230ENST00000568369 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
FANCA-230ENST00000568369 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
FANCA-230ENST00000568369 PRAM1Q96QH2 718 aa12.82□□□□□ -0.36
FANCA-230ENST00000568369 MAP7D2Q96T17 732 aa12.82□□□□□ -0.36
FANCA-230ENST00000568369 CWC22Q9HCG8 908 aaKnown RBP12.82□□□□□ -0.36
FANCA-230ENST00000568369 MCM4P33991 863 aa12.82□□□□□ -0.36
FANCA-230ENST00000568369 K7ELQ4 463 aaPredicted RBP12.81□□□□□ -0.36
FANCA-230ENST00000568369 PSMA5P28066 241 aa12.81□□□□□ -0.36
FANCA-230ENST00000568369 PSME1Q06323 249 aa12.81□□□□□ -0.36
FANCA-230ENST00000568369 CYB5RLQ6IPT4 315 aa12.81□□□□□ -0.36
FANCA-230ENST00000568369 MTERF4Q7Z6M4 381 aaKnown RBP12.81□□□□□ -0.36
FANCA-230ENST00000568369 GPS2Q13227 327 aa12.81□□□□□ -0.36
FANCA-230ENST00000568369 CDK13Q14004 1512 aaKnown RBP12.81□□□□□ -0.36
FANCA-230ENST00000568369 HOMER1Q86YM7 354 aa12.81□□□□□ -0.36
FANCA-230ENST00000568369 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
FANCA-230ENST00000568369 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
FANCA-230ENST00000568369 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
FANCA-230ENST00000568369 CHD1LQ86WJ1 897 aa12.81□□□□□ -0.36
FANCA-230ENST00000568369 GNAI2P04899 355 aa12.8□□□□□ -0.36
FANCA-230ENST00000568369 NLRP6P59044 892 aa12.8□□□□□ -0.36
FANCA-230ENST00000568369 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
FANCA-230ENST00000568369 APPP05067 770 aa12.8□□□□□ -0.36
FANCA-230ENST00000568369 PDCP20941 246 aa12.8□□□□□ -0.36
FANCA-230ENST00000568369 HOOK1Q9UJC3 728 aaKnown RBP12.8□□□□□ -0.36
FANCA-230ENST00000568369 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
FANCA-230ENST00000568369 A0A0U1RQG5 324 aaPredicted RBP12.79□□□□□ -0.36
FANCA-230ENST00000568369 TPM2P07951 284 aa12.79□□□□□ -0.36
FANCA-230ENST00000568369 RIC3Q7Z5B4 369 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms