RNA–Protein interactions for RNA: ENST00000568080.1

GSE1-213, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-213ENST00000568080 KNDC1Q76NI1 1749 aa21.76■■□□□ 1.07
GSE1-213ENST00000568080 YTHDC2Q9H6S0 1430 aaKnown RBP21.76■■□□□ 1.07
GSE1-213ENST00000568080 MYOM2P54296 1465 aa21.76■■□□□ 1.07
GSE1-213ENST00000568080 ABCC11Q96J66 1382 aa21.75■■□□□ 1.07
GSE1-213ENST00000568080 C14orf93Q9H972 538 aaKnown RBP21.75■■□□□ 1.07
GSE1-213ENST00000568080 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
GSE1-213ENST00000568080 LAMC1P11047 1609 aa21.74■■□□□ 1.07
GSE1-213ENST00000568080 ESCO1Q5FWF5 840 aa21.74■■□□□ 1.07
GSE1-213ENST00000568080 CFAP70Q5T0N1 1121 aa21.74■■□□□ 1.07
GSE1-213ENST00000568080 ZNF772Q68DY9 489 aaPredicted RBP21.73■■□□□ 1.07
GSE1-213ENST00000568080 DHX57Q6P158 1386 aaKnown RBP21.73■■□□□ 1.07
GSE1-213ENST00000568080 NRXN1Q9ULB1 1477 aa21.72■■□□□ 1.07
GSE1-213ENST00000568080 NUTM2FA1L443 756 aa21.72■■□□□ 1.07
GSE1-213ENST00000568080 PLEKHH1Q9ULM0 1364 aa21.72■■□□□ 1.07
GSE1-213ENST00000568080 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
GSE1-213ENST00000568080 PNPLA6Q8IY17 1366 aa21.7■■□□□ 1.06
GSE1-213ENST00000568080 DCAF11Q8TEB1 546 aa21.69■■□□□ 1.06
GSE1-213ENST00000568080 SOS2Q07890 1332 aaPredicted RBP21.68■■□□□ 1.06
GSE1-213ENST00000568080 NPHP3Q7Z494 1330 aa21.68■■□□□ 1.06
GSE1-213ENST00000568080 SIRT1Q96EB6 747 aa21.67■■□□□ 1.06
GSE1-213ENST00000568080 SAFB2Q14151 953 aaKnown RBP eCLIP21.66■■□□□ 1.06
GSE1-213ENST00000568080 C8orf37Q96NL8 207 aa21.66■■□□□ 1.06
GSE1-213ENST00000568080 POGKQ9P215 609 aa21.66■■□□□ 1.06
GSE1-213ENST00000568080 AFF2P51816 1311 aa21.65■■□□□ 1.06
GSE1-213ENST00000568080 FOXO3O43524 673 aa21.65■■□□□ 1.06
GSE1-213ENST00000568080 PRAM1Q96QH2 718 aa21.65■■□□□ 1.06
GSE1-213ENST00000568080 FMN2Q9NZ56 1722 aa21.64■■□□□ 1.06
GSE1-213ENST00000568080 ADAMTS2O95450 1211 aa21.64■■□□□ 1.05
GSE1-213ENST00000568080 XPCQ01831 940 aaPredicted RBP21.63■■□□□ 1.05
GSE1-213ENST00000568080 STAC3Q96MF2 364 aa21.62■■□□□ 1.05
GSE1-213ENST00000568080 RXRBP28702 533 aa21.61■■□□□ 1.05
GSE1-213ENST00000568080 NGLY1Q96IV0 654 aa21.61■■□□□ 1.05
GSE1-213ENST00000568080 TRAK1Q9UPV9 953 aa21.61■■□□□ 1.05
GSE1-213ENST00000568080 KIF1AQ12756 1690 aa21.59■■□□□ 1.05
GSE1-213ENST00000568080 DLC1Q96QB1 1528 aa21.59■■□□□ 1.05
GSE1-213ENST00000568080 RGPD8O14715 1765 aaPredicted RBP21.59■■□□□ 1.05
GSE1-213ENST00000568080 PXDNQ92626 1479 aa21.58■■□□□ 1.05
GSE1-213ENST00000568080 ADGRB1O14514 1584 aa21.57■■□□□ 1.04
GSE1-213ENST00000568080 COL22A1Q8NFW1 1626 aaPredicted RBP21.56■■□□□ 1.04
GSE1-213ENST00000568080 PHF8Q9UPP1 1060 aa21.55■■□□□ 1.04
GSE1-213ENST00000568080 HIRIP3Q9BW71 556 aaPredicted RBP21.54■■□□□ 1.04
GSE1-213ENST00000568080 QTRT2Q9H974 415 aaKnown RBP21.54■■□□□ 1.04
GSE1-213ENST00000568080 KRT28Q7Z3Y7 464 aa21.53■■□□□ 1.04
GSE1-213ENST00000568080 MINK1Q8N4C8 1332 aaPredicted RBP21.53■■□□□ 1.04
GSE1-213ENST00000568080 PSME1Q06323 249 aa21.52■■□□□ 1.04
GSE1-213ENST00000568080 USP21Q9UK80 565 aa21.51■■□□□ 1.03
GSE1-213ENST00000568080 ADGRB2O60241 1585 aa21.5■■□□□ 1.03
GSE1-213ENST00000568080 RBM6P78332 1123 aaKnown RBP21.5■■□□□ 1.03
GSE1-213ENST00000568080 SPATA31A3Q5VYP0 1347 aa21.5■■□□□ 1.03
GSE1-213ENST00000568080 PMFBP1Q8TBY8 1022 aa21.49■■□□□ 1.03
GSE1-213ENST00000568080 EIF3AQ14152 1382 aaKnown RBP21.48■■□□□ 1.03
GSE1-213ENST00000568080 ANKARQ7Z5J8 1434 aa21.48■■□□□ 1.03
GSE1-213ENST00000568080 CDK12Q9NYV4 1490 aaPredicted RBP21.48■■□□□ 1.03
GSE1-213ENST00000568080 HAP1P54257 671 aaPredicted RBP21.48■■□□□ 1.03
GSE1-213ENST00000568080 LMOD2Q6P5Q4 547 aa21.48■■□□□ 1.03
GSE1-213ENST00000568080 MARF1Q9Y4F3 1742 aaKnown RBP21.47■■□□□ 1.03
GSE1-213ENST00000568080 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
GSE1-213ENST00000568080 FNBP4Q8N3X1 1017 aaPredicted RBP21.46■■□□□ 1.03
GSE1-213ENST00000568080 TRPC5Q9UL62 973 aaPredicted RBP21.46■■□□□ 1.03
GSE1-213ENST00000568080 USP32Q8NFA0 1604 aa21.46■■□□□ 1.03
GSE1-213ENST00000568080 ARHGEF28Q8N1W1 1705 aaKnown RBP21.46■■□□□ 1.03
GSE1-213ENST00000568080 WASLO00401 505 aaPredicted RBP21.45■■□□□ 1.02
GSE1-213ENST00000568080 TNS3Q68CZ2 1445 aa21.45■■□□□ 1.02
GSE1-213ENST00000568080 KIAA1210Q9ULL0 1709 aa21.44■■□□□ 1.02
GSE1-213ENST00000568080 TULP4Q9NRJ4 1543 aa21.43■■□□□ 1.02
GSE1-213ENST00000568080 SBNO1A3KN83 1393 aa21.42■■□□□ 1.02
GSE1-213ENST00000568080 RGS12O14924 1447 aa21.42■■□□□ 1.02
GSE1-213ENST00000568080 GPRASP1Q5JY77 1395 aa21.41■■□□□ 1.02
GSE1-213ENST00000568080 ARHGEF10O15013 1369 aa21.4■■□□□ 1.02
GSE1-213ENST00000568080 PRR36Q9H6K5 1346 aa21.4■■□□□ 1.02
GSE1-213ENST00000568080 NGDNQ8NEJ9 315 aaKnown RBP21.4■■□□□ 1.02
GSE1-213ENST00000568080 CABLES1Q8TDN4 633 aa21.39■■□□□ 1.01
GSE1-213ENST00000568080 UPF1Q92900 1129 aaKnown RBP eCLIP21.39■■□□□ 1.01
GSE1-213ENST00000568080 ATRNO75882 1429 aa21.38■■□□□ 1.01
GSE1-213ENST00000568080 NEUROD1Q13562 356 aa21.38■■□□□ 1.01
GSE1-213ENST00000568080 NBPF1Q3BBV0 1214 aa21.38■■□□□ 1.01
GSE1-213ENST00000568080 ITSN1Q15811 1721 aa21.38■■□□□ 1.01
GSE1-213ENST00000568080 SIN3AQ96ST3 1273 aa21.37■■□□□ 1.01
GSE1-213ENST00000568080 BCL9LQ86UU0 1499 aa21.37■■□□□ 1.01
GSE1-213ENST00000568080 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
GSE1-213ENST00000568080 L3MBTL2Q969R5 705 aa21.36■■□□□ 1.01
GSE1-213ENST00000568080 NUDT16Q96DE0 195 aaKnown RBP21.36■■□□□ 1.01
GSE1-213ENST00000568080 CDK19Q9BWU1 502 aa21.36■■□□□ 1.01
GSE1-213ENST00000568080 UNC5CLQ8IV45 518 aa21.34■■□□□ 1.01
GSE1-213ENST00000568080 TRPM3Q9HCF6 1732 aaPredicted RBP21.34■■□□□ 1.01
GSE1-213ENST00000568080 ABCA3Q99758 1704 aa21.33■■□□□ 1.01
GSE1-213ENST00000568080 GJD4Q96KN9 370 aaPredicted RBP21.33■■□□□ 1.01
GSE1-213ENST00000568080 ATP7BP35670 1465 aa21.32■■□□□ 1
GSE1-213ENST00000568080 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
GSE1-213ENST00000568080 SLIT2O94813 1529 aa21.31■■□□□ 1
GSE1-213ENST00000568080 CENPJQ9HC77 1338 aaPredicted RBP21.3■■□□□ 1
GSE1-213ENST00000568080 ATAD2Q6PL18 1390 aa21.3■■□□□ 1
GSE1-213ENST00000568080 ALS2Q96Q42 1657 aa21.3■■□□□ 1
GSE1-213ENST00000568080 SRPK2P78362 688 aaKnown RBP21.29■■□□□ 1
GSE1-213ENST00000568080 CCDC9Q9Y3X0 531 aaKnown RBP21.29■■□□□ 1
GSE1-213ENST00000568080 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
GSE1-213ENST00000568080 CCDC61Q9Y6R9 512 aa21.28■■□□□ 1
GSE1-213ENST00000568080 QRICH2Q9H0J4 1663 aa21.27■■□□□ 1
GSE1-213ENST00000568080 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
GSE1-213ENST00000568080 EP400Q96L91 3159 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms