RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ORAI2Q96SN7 254 aa21.56■■□□□ 1.04
FANCA-220ENST00000566409 CDC42BPGQ6DT37 1551 aa21.54■■□□□ 1.04
FANCA-220ENST00000566409 LAMC1P11047 1609 aa21.54■■□□□ 1.04
FANCA-220ENST00000566409 SPATA31A6Q5VVP1 1343 aa21.54■■□□□ 1.04
FANCA-220ENST00000566409 POTEAQ6S8J7 498 aa21.53■■□□□ 1.04
FANCA-220ENST00000566409 DHX57Q6P158 1386 aaKnown RBP21.49■■□□□ 1.03
FANCA-220ENST00000566409 DCAF11Q8TEB1 546 aa21.49■■□□□ 1.03
FANCA-220ENST00000566409 LRRC59Q96AG4 307 aaKnown RBP21.49■■□□□ 1.03
FANCA-220ENST00000566409 SIRT1Q96EB6 747 aa21.49■■□□□ 1.03
FANCA-220ENST00000566409 KDM2AQ9Y2K7 1162 aa21.49■■□□□ 1.03
FANCA-220ENST00000566409 ADGRB1O14514 1584 aa21.48■■□□□ 1.03
FANCA-220ENST00000566409 SOS2Q07890 1332 aaPredicted RBP21.47■■□□□ 1.03
FANCA-220ENST00000566409 FMN2Q9NZ56 1722 aa21.46■■□□□ 1.03
FANCA-220ENST00000566409 PNPLA6Q8IY17 1366 aa21.46■■□□□ 1.03
FANCA-220ENST00000566409 NUTM2FA1L443 756 aa21.45■■□□□ 1.02
FANCA-220ENST00000566409 NUTM2BA6NNL0 878 aaPredicted RBP21.44■■□□□ 1.02
FANCA-220ENST00000566409 NUTM2EB1AL46 878 aaPredicted RBP21.44■■□□□ 1.02
FANCA-220ENST00000566409 ESCO1Q5FWF5 840 aa21.44■■□□□ 1.02
FANCA-220ENST00000566409 NUTM2AQ8IVF1 878 aaPredicted RBP21.44■■□□□ 1.02
FANCA-220ENST00000566409 RGPD8O14715 1765 aaPredicted RBP21.43■■□□□ 1.02
FANCA-220ENST00000566409 DLC1Q96QB1 1528 aa21.43■■□□□ 1.02
FANCA-220ENST00000566409 PRAM1Q96QH2 718 aa21.42■■□□□ 1.02
FANCA-220ENST00000566409 SAFB2Q14151 953 aaKnown RBP eCLIP21.41■■□□□ 1.02
FANCA-220ENST00000566409 MEX3CQ5U5Q3 659 aaKnown RBP21.41■■□□□ 1.02
FANCA-220ENST00000566409 STAC3Q96MF2 364 aa21.41■■□□□ 1.02
FANCA-220ENST00000566409 PXDNQ92626 1479 aa21.4■■□□□ 1.02
FANCA-220ENST00000566409 FOXO3O43524 673 aa21.39■■□□□ 1.01
FANCA-220ENST00000566409 TRAK1Q9UPV9 953 aa21.39■■□□□ 1.01
FANCA-220ENST00000566409 NPHP3Q7Z494 1330 aa21.37■■□□□ 1.01
FANCA-220ENST00000566409 XPCQ01831 940 aaPredicted RBP21.37■■□□□ 1.01
FANCA-220ENST00000566409 POGKQ9P215 609 aa21.36■■□□□ 1.01
FANCA-220ENST00000566409 COL22A1Q8NFW1 1626 aaPredicted RBP21.36■■□□□ 1.01
FANCA-220ENST00000566409 ZNF772Q68DY9 489 aaPredicted RBP21.35■■□□□ 1.01
FANCA-220ENST00000566409 USP32Q8NFA0 1604 aa21.35■■□□□ 1.01
FANCA-220ENST00000566409 ADGRB2O60241 1585 aa21.34■■□□□ 1.01
FANCA-220ENST00000566409 KIF1AQ12756 1690 aa21.34■■□□□ 1.01
FANCA-220ENST00000566409 AFF2P51816 1311 aa21.33■■□□□ 1.01
FANCA-220ENST00000566409 ARHGEF28Q8N1W1 1705 aaKnown RBP21.32■■□□□ 1
FANCA-220ENST00000566409 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
FANCA-220ENST00000566409 ADAMTS2O95450 1211 aa21.31■■□□□ 1
FANCA-220ENST00000566409 C8orf37Q96NL8 207 aa21.31■■□□□ 1
FANCA-220ENST00000566409 KIAA1210Q9ULL0 1709 aa21.31■■□□□ 1
FANCA-220ENST00000566409 MINK1Q8N4C8 1332 aaPredicted RBP21.29■■□□□ 1
FANCA-220ENST00000566409 PHF8Q9UPP1 1060 aa21.29■■□□□ 1
FANCA-220ENST00000566409 NBPF1Q3BBV0 1214 aa21.28■■□□□ 1
FANCA-220ENST00000566409 SIN3AQ96ST3 1273 aa21.28■■□□□ 1
FANCA-220ENST00000566409 KRT28Q7Z3Y7 464 aa21.27■■□□□ 1
FANCA-220ENST00000566409 SPATA31A3Q5VYP0 1347 aa21.27■□□□□ 0.99
FANCA-220ENST00000566409 PRR36Q9H6K5 1346 aa21.27■□□□□ 0.99
FANCA-220ENST00000566409 ANKARQ7Z5J8 1434 aa21.26■□□□□ 0.99
FANCA-220ENST00000566409 WASLO00401 505 aaPredicted RBP21.25■□□□□ 0.99
FANCA-220ENST00000566409 L3MBTL2Q969R5 705 aa21.25■□□□□ 0.99
FANCA-220ENST00000566409 NGLY1Q96IV0 654 aa21.25■□□□□ 0.99
FANCA-220ENST00000566409 MARF1Q9Y4F3 1742 aaKnown RBP21.25■□□□□ 0.99
FANCA-220ENST00000566409 RXRBP28702 533 aa21.24■□□□□ 0.99
FANCA-220ENST00000566409 PMFBP1Q8TBY8 1022 aa21.24■□□□□ 0.99
FANCA-220ENST00000566409 QTRT2Q9H974 415 aaKnown RBP21.23■□□□□ 0.99
FANCA-220ENST00000566409 TULP4Q9NRJ4 1543 aa21.23■□□□□ 0.99
FANCA-220ENST00000566409 FNBP4Q8N3X1 1017 aaPredicted RBP21.21■□□□□ 0.99
FANCA-220ENST00000566409 TNS3Q68CZ2 1445 aa21.2■□□□□ 0.98
FANCA-220ENST00000566409 TRPM3Q9HCF6 1732 aaPredicted RBP21.19■□□□□ 0.98
FANCA-220ENST00000566409 PSME1Q06323 249 aa21.19■□□□□ 0.98
FANCA-220ENST00000566409 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
FANCA-220ENST00000566409 SBNO1A3KN83 1393 aa21.19■□□□□ 0.98
FANCA-220ENST00000566409 CDK12Q9NYV4 1490 aaPredicted RBP21.19■□□□□ 0.98
FANCA-220ENST00000566409 USP21Q9UK80 565 aa21.18■□□□□ 0.98
FANCA-220ENST00000566409 EIF3AQ14152 1382 aaKnown RBP21.17■□□□□ 0.98
FANCA-220ENST00000566409 ATP7BP35670 1465 aa21.17■□□□□ 0.98
FANCA-220ENST00000566409 BCL9LQ86UU0 1499 aa21.16■□□□□ 0.98
FANCA-220ENST00000566409 RBM6P78332 1123 aaKnown RBP21.16■□□□□ 0.98
FANCA-220ENST00000566409 CABLES1Q8TDN4 633 aa21.16■□□□□ 0.98
FANCA-220ENST00000566409 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
FANCA-220ENST00000566409 NUDT16Q96DE0 195 aaKnown RBP21.15■□□□□ 0.98
FANCA-220ENST00000566409 CDK19Q9BWU1 502 aa21.15■□□□□ 0.98
FANCA-220ENST00000566409 TRPM1Q7Z4N2 1603 aa21.15■□□□□ 0.98
FANCA-220ENST00000566409 RGS12O14924 1447 aa21.14■□□□□ 0.98
FANCA-220ENST00000566409 ITSN1Q15811 1721 aa21.14■□□□□ 0.97
FANCA-220ENST00000566409 ALS2Q96Q42 1657 aa21.14■□□□□ 0.97
FANCA-220ENST00000566409 ATRNO75882 1429 aa21.13■□□□□ 0.97
FANCA-220ENST00000566409 TRIM26Q12899 539 aaPredicted RBP21.13■□□□□ 0.97
FANCA-220ENST00000566409 LMOD2Q6P5Q4 547 aa21.12■□□□□ 0.97
FANCA-220ENST00000566409 TRPC5Q9UL62 973 aaPredicted RBP21.12■□□□□ 0.97
FANCA-220ENST00000566409 TOPAZ1Q8N9V7 1692 aa21.12■□□□□ 0.97
FANCA-220ENST00000566409 ARHGEF10O15013 1369 aa21.11■□□□□ 0.97
FANCA-220ENST00000566409 PLEKHG5O94827 1062 aa21.11■□□□□ 0.97
FANCA-220ENST00000566409 CENPJQ9HC77 1338 aaPredicted RBP21.1■□□□□ 0.97
FANCA-220ENST00000566409 SLIT2O94813 1529 aa21.1■□□□□ 0.97
FANCA-220ENST00000566409 NGDNQ8NEJ9 315 aaKnown RBP21.1■□□□□ 0.97
FANCA-220ENST00000566409 GPRASP1Q5JY77 1395 aa21.1■□□□□ 0.97
FANCA-220ENST00000566409 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.09■□□□□ 0.97
FANCA-220ENST00000566409 QRICH2Q9H0J4 1663 aa21.09■□□□□ 0.97
FANCA-220ENST00000566409 NBPF8Q3BBV2 869 aa21.09■□□□□ 0.97
FANCA-220ENST00000566409 UPF1Q92900 1129 aaKnown RBP eCLIP21.08■□□□□ 0.975e-8■□□□□ 10.9
FANCA-220ENST00000566409 CRYBG1Q9Y4K1 1723 aa21.07■□□□□ 0.96
FANCA-220ENST00000566409 CCDC61Q9Y6R9 512 aa21.07■□□□□ 0.96
FANCA-220ENST00000566409 POLR3AO14802 1390 aaPredicted RBP21.06■□□□□ 0.96
FANCA-220ENST00000566409 PLCH1Q4KWH8 1693 aa21.05■□□□□ 0.96
FANCA-220ENST00000566409 PLEKHG3A1L390 1219 aa21.05■□□□□ 0.96
FANCA-220ENST00000566409 UNC5CLQ8IV45 518 aa21.05■□□□□ 0.96
FANCA-220ENST00000566409 ACEP12821 1306 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms