RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 MIS18AQ9NYP9 233 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 RTEL1-TNFRSF6BF6WH68 1400 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 RRS1Q15050 365 aaKnown RBP4.39□□□□□ -1.71
CHD9-213ENST00000564845 PPRC1Q5VV67 1664 aaKnown RBP4.39□□□□□ -1.71
CHD9-213ENST00000564845 CCDC144AA2RUR9 1427 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 CNTLNQ9NXG0 1405 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 EFCAB2Q5VUJ9 269 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 CARD14Q9BXL6 1004 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 UPF2Q9HAU5 1272 aaKnown RBP4.39□□□□□ -1.71
CHD9-213ENST00000564845 CEP350Q5VT06 3117 aa4.39□□□□□ -1.71
CHD9-213ENST00000564845 PAK3O75914 559 aaPredicted RBP4.38□□□□□ -1.71
CHD9-213ENST00000564845 TSR2Q969E8 191 aaKnown RBP4.38□□□□□ -1.71
CHD9-213ENST00000564845 NOS1P29475 1434 aa4.38□□□□□ -1.71
CHD9-213ENST00000564845 YEATS2Q9ULM3 1422 aa4.38□□□□□ -1.71
CHD9-213ENST00000564845 HDAC5Q9UQL6 1122 aa4.38□□□□□ -1.71
CHD9-213ENST00000564845 LTV1Q96GA3 475 aaPredicted RBP4.38□□□□□ -1.71
CHD9-213ENST00000564845 APBB1O00213 710 aa4.38□□□□□ -1.71
CHD9-213ENST00000564845 GLIPR1L2Q4G1C9 344 aa4.38□□□□□ -1.71
CHD9-213ENST00000564845 IDI1Q13907 227 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 PNNQ9H307 717 aaKnown RBP4.37□□□□□ -1.71
CHD9-213ENST00000564845 CD163L1Q9NR16 1453 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 SPEGQ15772 3267 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 NPATQ14207 1427 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 MYO3AQ8NEV4 1616 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 EFCAB6Q5THR3 1501 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 KRT24Q2M2I5 525 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 RSPH4AQ5TD94 716 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 CLTCL1P53675 1640 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 MLH3Q9UHC1 1453 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 ASXL2Q76L83 1435 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 RTN4Q9NQC3 1192 aaKnown RBP4.37□□□□□ -1.71
CHD9-213ENST00000564845 PNISRQ8TF01 805 aaKnown RBP4.37□□□□□ -1.71
CHD9-213ENST00000564845 CHMP4CQ96CF2 233 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 PRAM1Q96QH2 718 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 SETD1AO15047 1707 aaKnown RBP4.37□□□□□ -1.71
CHD9-213ENST00000564845 CCDC136Q96JN2 1154 aa4.37□□□□□ -1.71
CHD9-213ENST00000564845 ADGRB3O60242 1522 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 SYNMO15061 1565 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 PANK1Q8TE04 598 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.36□□□□□ -1.71
CHD9-213ENST00000564845 ABCA6Q8N139 1617 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 FAM83GA6ND36 823 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 CRBNQ96SW2 442 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 SBNO2Q9Y2G9 1366 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 CCER2I3L3R5 266 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 KNSTRNQ9Y448 316 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 DNAH14Q0VDD8 3507 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 NGEFQ8N5V2 710 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 USHBP1Q8N6Y0 703 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 FANCAO15360 1455 aa4.36□□□□□ -1.71
CHD9-213ENST00000564845 PTMSP20962 102 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 C1orf115Q9H7X2 142 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 ATAD2Q6PL18 1390 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 ERVK-7P63135 1459 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 MROH2AA6NES4 1674 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 SPHKAPQ2M3C7 1700 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 EIF3AQ14152 1382 aaKnown RBP4.35□□□□□ -1.71
CHD9-213ENST00000564845 DHX37Q8IY37 1157 aaKnown RBP4.35□□□□□ -1.71
CHD9-213ENST00000564845 MS4A1P11836 297 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 L1TD1Q5T7N2 865 aaKnown RBP4.35□□□□□ -1.71
CHD9-213ENST00000564845 MTHFSP49914 203 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 ESF1Q9H501 851 aaKnown RBP4.35□□□□□ -1.71
CHD9-213ENST00000564845 PIP4K2AP48426 406 aaPredicted RBP4.35□□□□□ -1.71
CHD9-213ENST00000564845 POGKQ9P215 609 aa4.35□□□□□ -1.71
CHD9-213ENST00000564845 AMER1Q5JTC6 1135 aaPredicted RBP4.35□□□□□ -1.71
CHD9-213ENST00000564845 CFAP74Q9C0B2 1584 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 PLEKHH1Q9ULM0 1364 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 CABP1Q9NZU7 370 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 UNC80Q8N2C7 3258 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 INSRP06213 1382 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 DNAH12Q6ZR08 3092 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 WDR43Q15061 677 aaKnown RBP eCLIP4.34□□□□□ -1.71
CHD9-213ENST00000564845 TAOK2Q9UL54 1235 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 SHPRHQ149N8 1683 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 ADGRL1O94910 1474 aa4.34□□□□□ -1.71
CHD9-213ENST00000564845 HMGB1P1B2RPK0 211 aaPredicted RBP4.34□□□□□ -1.72
CHD9-213ENST00000564845 COG6Q9Y2V7 657 aa4.34□□□□□ -1.72
CHD9-213ENST00000564845 EMILIN1Q9Y6C2 1016 aa4.34□□□□□ -1.72
CHD9-213ENST00000564845 EIF2AK4Q9P2K8 1649 aaKnown RBP4.34□□□□□ -1.72
CHD9-213ENST00000564845 A0A0G2JS52 829 aa4.34□□□□□ -1.72
CHD9-213ENST00000564845 RICTORQ6R327 1708 aa4.34□□□□□ -1.72
CHD9-213ENST00000564845 HECW2Q9P2P5 1572 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 DIP2CQ9Y2E4 1556 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 CD109Q6YHK3 1445 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 ARHGAP31Q2M1Z3 1444 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 NRXN3Q9Y4C0 1643 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 HSPA2P54652 639 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 EIF3DO15371 548 aaKnown RBP eCLIP4.33□□□□□ -1.729e-7■□□□□ 9.6
CHD9-213ENST00000564845 TMF1P82094 1093 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 MYOM2P54296 1465 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 U2AF1L5P0DN76 240 aaPredicted RBP4.33□□□□□ -1.72
CHD9-213ENST00000564845 U2AF1Q01081 240 aaKnown RBP eCLIP4.33□□□□□ -1.72
CHD9-213ENST00000564845 TRMT2AQ8IZ69 625 aaKnown RBP4.33□□□□□ -1.72
CHD9-213ENST00000564845 PIK3C2GO75747 1445 aa4.33□□□□□ -1.72
CHD9-213ENST00000564845 PPP2R1AP30153 589 aa4.32□□□□□ -1.72
CHD9-213ENST00000564845 RTL5Q5HYW3 569 aaPredicted RBP4.32□□□□□ -1.72
CHD9-213ENST00000564845 FOXD4L1Q9NU39 408 aa4.32□□□□□ -1.72
CHD9-213ENST00000564845 MYO5CQ9NQX4 1742 aa4.32□□□□□ -1.72
CHD9-213ENST00000564845 KANK1Q14678 1352 aa4.32□□□□□ -1.72
CHD9-213ENST00000564845 FOXO3O43524 673 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms