RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 KNDC1Q76NI1 1749 aa24.83■■□□□ 1.57
CCNF-203ENST00000564236 ORAI2Q96SN7 254 aa24.83■■□□□ 1.57
CCNF-203ENST00000564236 SIRT1Q96EB6 747 aa24.82■■□□□ 1.56
CCNF-203ENST00000564236 C14orf93Q9H972 538 aaKnown RBP24.8■■□□□ 1.56
CCNF-203ENST00000564236 YTHDC2Q9H6S0 1430 aaKnown RBP24.79■■□□□ 1.56
CCNF-203ENST00000564236 NUTM2BA6NNL0 878 aaPredicted RBP24.79■■□□□ 1.56
CCNF-203ENST00000564236 NUTM2EB1AL46 878 aaPredicted RBP24.79■■□□□ 1.56
CCNF-203ENST00000564236 NUTM2AQ8IVF1 878 aaPredicted RBP24.79■■□□□ 1.56
CCNF-203ENST00000564236 CDK12Q9NYV4 1490 aaPredicted RBP24.78■■□□□ 1.56
CCNF-203ENST00000564236 HRCP23327 699 aa24.78■■□□□ 1.56
CCNF-203ENST00000564236 TMEM132EQ6IEE7 984 aa24.77■■□□□ 1.56
CCNF-203ENST00000564236 WAPLQ7Z5K2 1190 aa24.76■■□□□ 1.55
CCNF-203ENST00000564236 STK26Q9P289 416 aa24.75■■□□□ 1.55
CCNF-203ENST00000564236 AFF2P51816 1311 aa24.75■■□□□ 1.55
CCNF-203ENST00000564236 NPHP3Q7Z494 1330 aa24.75■■□□□ 1.55
CCNF-203ENST00000564236 PLEKHH1Q9ULM0 1364 aa24.75■■□□□ 1.55
CCNF-203ENST00000564236 PXDNQ92626 1479 aa24.74■■□□□ 1.55
CCNF-203ENST00000564236 COL22A1Q8NFW1 1626 aaPredicted RBP24.74■■□□□ 1.55
CCNF-203ENST00000564236 RXRBP28702 533 aa24.72■■□□□ 1.55
CCNF-203ENST00000564236 ESCO1Q5FWF5 840 aa24.71■■□□□ 1.55
CCNF-203ENST00000564236 DHX57Q6P158 1386 aaKnown RBP24.7■■□□□ 1.55
CCNF-203ENST00000564236 CFAP70Q5T0N1 1121 aa24.69■■□□□ 1.54
CCNF-203ENST00000564236 DLC1Q96QB1 1528 aa24.68■■□□□ 1.54
CCNF-203ENST00000564236 C8orf37Q96NL8 207 aa24.68■■□□□ 1.54
CCNF-203ENST00000564236 FMN2Q9NZ56 1722 aa24.68■■□□□ 1.54
CCNF-203ENST00000564236 STAC3Q96MF2 364 aa24.67■■□□□ 1.54
CCNF-203ENST00000564236 ADGRB1O14514 1584 aa24.66■■□□□ 1.54
CCNF-203ENST00000564236 FOXO3O43524 673 aa24.65■■□□□ 1.54
CCNF-203ENST00000564236 FNBP4Q8N3X1 1017 aaPredicted RBP24.65■■□□□ 1.54
CCNF-203ENST00000564236 KIF1AQ12756 1690 aa24.64■■□□□ 1.53
CCNF-203ENST00000564236 RBM6P78332 1123 aaKnown RBP24.63■■□□□ 1.53
CCNF-203ENST00000564236 QTRT2Q9H974 415 aaKnown RBP24.63■■□□□ 1.53
CCNF-203ENST00000564236 ADAMTS2O95450 1211 aa24.62■■□□□ 1.53
CCNF-203ENST00000564236 NGLY1Q96IV0 654 aa24.62■■□□□ 1.53
CCNF-203ENST00000564236 UPF1Q92900 1129 aaKnown RBP eCLIP24.61■■□□□ 1.53
CCNF-203ENST00000564236 ADGRB2O60241 1585 aa24.6■■□□□ 1.53
CCNF-203ENST00000564236 RGS12O14924 1447 aa24.6■■□□□ 1.53
CCNF-203ENST00000564236 NUTM2FA1L443 756 aa24.59■■□□□ 1.53
CCNF-203ENST00000564236 PRAM1Q96QH2 718 aa24.59■■□□□ 1.53
CCNF-203ENST00000564236 SPATA31A3Q5VYP0 1347 aa24.59■■□□□ 1.53
CCNF-203ENST00000564236 ANKARQ7Z5J8 1434 aa24.57■■□□□ 1.52
CCNF-203ENST00000564236 ATRNO75882 1429 aa24.56■■□□□ 1.52
CCNF-203ENST00000564236 XPCQ01831 940 aaPredicted RBP24.56■■□□□ 1.52
CCNF-203ENST00000564236 USP21Q9UK80 565 aa24.56■■□□□ 1.52
CCNF-203ENST00000564236 TRPC5Q9UL62 973 aaPredicted RBP24.55■■□□□ 1.52
CCNF-203ENST00000564236 BCL9LQ86UU0 1499 aa24.54■■□□□ 1.52
CCNF-203ENST00000564236 DCAF11Q8TEB1 546 aa24.54■■□□□ 1.52
CCNF-203ENST00000564236 PHF8Q9UPP1 1060 aa24.54■■□□□ 1.52
CCNF-203ENST00000564236 SBNO1A3KN83 1393 aa24.53■■□□□ 1.52
CCNF-203ENST00000564236 KRT28Q7Z3Y7 464 aa24.52■■□□□ 1.52
CCNF-203ENST00000564236 POGKQ9P215 609 aa24.51■■□□□ 1.51
CCNF-203ENST00000564236 TNS3Q68CZ2 1445 aa24.51■■□□□ 1.51
CCNF-203ENST00000564236 USP32Q8NFA0 1604 aa24.5■■□□□ 1.51
CCNF-203ENST00000564236 MARF1Q9Y4F3 1742 aaKnown RBP24.5■■□□□ 1.51
CCNF-203ENST00000564236 PSME1Q06323 249 aa24.49■■□□□ 1.51
CCNF-203ENST00000564236 EIF3AQ14152 1382 aaKnown RBP24.49■■□□□ 1.51
CCNF-203ENST00000564236 SLIT2O94813 1529 aa24.48■■□□□ 1.51
CCNF-203ENST00000564236 SAFB2Q14151 953 aaKnown RBP eCLIP24.48■■□□□ 1.51
CCNF-203ENST00000564236 TRAK1Q9UPV9 953 aa24.48■■□□□ 1.51
CCNF-203ENST00000564236 KDM2AQ9Y2K7 1162 aa24.48■■□□□ 1.51
CCNF-203ENST00000564236 RGPD8O14715 1765 aaPredicted RBP24.46■■□□□ 1.51
CCNF-203ENST00000564236 TULP4Q9NRJ4 1543 aa24.45■■□□□ 1.51
CCNF-203ENST00000564236 ARHGEF10O15013 1369 aa24.45■■□□□ 1.5
CCNF-203ENST00000564236 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.45■■□□□ 1.5
CCNF-203ENST00000564236 PRR36Q9H6K5 1346 aa24.42■■□□□ 1.5
CCNF-203ENST00000564236 WASLO00401 505 aaPredicted RBP24.42■■□□□ 1.5
CCNF-203ENST00000564236 UNC5CLQ8IV45 518 aa24.41■■□□□ 1.5
CCNF-203ENST00000564236 ATAD2Q6PL18 1390 aa24.41■■□□□ 1.5
CCNF-203ENST00000564236 GJD4Q96KN9 370 aaPredicted RBP24.4■■□□□ 1.5
CCNF-203ENST00000564236 MINK1Q8N4C8 1332 aaPredicted RBP24.39■■□□□ 1.5
CCNF-203ENST00000564236 ARHGEF28Q8N1W1 1705 aaKnown RBP24.39■■□□□ 1.5
CCNF-203ENST00000564236 KIAA1210Q9ULL0 1709 aa24.39■■□□□ 1.5
CCNF-203ENST00000564236 HIRIP3Q9BW71 556 aaPredicted RBP24.39■■□□□ 1.49
CCNF-203ENST00000564236 TRPM3Q9HCF6 1732 aaPredicted RBP24.38■■□□□ 1.49
CCNF-203ENST00000564236 PMFBP1Q8TBY8 1022 aa24.38■■□□□ 1.49
CCNF-203ENST00000564236 ABCA3Q99758 1704 aa24.36■■□□□ 1.49
CCNF-203ENST00000564236 ATP7BP35670 1465 aa24.36■■□□□ 1.49
CCNF-203ENST00000564236 RALGAPBQ86X10 1494 aa24.36■■□□□ 1.49
CCNF-203ENST00000564236 GPRASP1Q5JY77 1395 aa24.35■■□□□ 1.49
CCNF-203ENST00000564236 ALS2Q96Q42 1657 aa24.34■■□□□ 1.49
CCNF-203ENST00000564236 GLI3P10071 1580 aa24.34■■□□□ 1.49
CCNF-203ENST00000564236 CABLES1Q8TDN4 633 aa24.34■■□□□ 1.49
CCNF-203ENST00000564236 NWD2Q9ULI1 1742 aa24.32■■□□□ 1.48
CCNF-203ENST00000564236 VPS72Q15906 364 aa24.31■■□□□ 1.48
CCNF-203ENST00000564236 HAP1P54257 671 aaPredicted RBP24.3■■□□□ 1.48
CCNF-203ENST00000564236 EP400Q96L91 3159 aa24.3■■□□□ 1.48
CCNF-203ENST00000564236 ONECUT3O60422 494 aaPredicted RBP24.29■■□□□ 1.48
CCNF-203ENST00000564236 NUDT16Q96DE0 195 aaKnown RBP24.29■■□□□ 1.48
CCNF-203ENST00000564236 PLCH1Q4KWH8 1693 aa24.28■■□□□ 1.48
CCNF-203ENST00000564236 LMOD2Q6P5Q4 547 aa24.28■■□□□ 1.48
CCNF-203ENST00000564236 CCDC125Q86Z20 511 aa24.28■■□□□ 1.48
CCNF-203ENST00000564236 POLR3AO14802 1390 aaPredicted RBP24.28■■□□□ 1.48
CCNF-203ENST00000564236 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
CCNF-203ENST00000564236 FAM83GA6ND36 823 aa24.27■■□□□ 1.48
CCNF-203ENST00000564236 NGDNQ8NEJ9 315 aaKnown RBP24.27■■□□□ 1.48
CCNF-203ENST00000564236 NBPF1Q3BBV0 1214 aa24.26■■□□□ 1.47
CCNF-203ENST00000564236 CRYBG1Q9Y4K1 1723 aa24.25■■□□□ 1.47
CCNF-203ENST00000564236 CDK19Q9BWU1 502 aa24.25■■□□□ 1.47
CCNF-203ENST00000564236 TOPAZ1Q8N9V7 1692 aa24.24■■□□□ 1.47
CCNF-203ENST00000564236 PLEKHG3A1L390 1219 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms