RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 KIF16BQ96L93 1317 aa15.47■□□□□ 0.07
COMMD4-209ENST00000564068 MAP7D2Q96T17 732 aa15.47■□□□□ 0.07
COMMD4-209ENST00000564068 SLC12A5Q9H2X9 1139 aa15.47■□□□□ 0.07
COMMD4-209ENST00000564068 GGNBP2Q9H3C7 697 aa15.47■□□□□ 0.07
COMMD4-209ENST00000564068 NOB1Q9ULX3 412 aaKnown RBP15.47■□□□□ 0.07
COMMD4-209ENST00000564068 CDC45O75419 566 aa15.45■□□□□ 0.06
COMMD4-209ENST00000564068 ZSCAN30Q86W11 494 aa15.45■□□□□ 0.06
COMMD4-209ENST00000564068 ERBINQ96RT1 1412 aa15.45■□□□□ 0.06
COMMD4-209ENST00000564068 HECW1Q76N89 1606 aa15.45■□□□□ 0.06
COMMD4-209ENST00000564068 ANO2Q9NQ90 1003 aa15.45■□□□□ 0.06
COMMD4-209ENST00000564068 SUPT6HQ7KZ85 1726 aaKnown RBP15.45■□□□□ 0.06
COMMD4-209ENST00000564068 CUL7Q14999 1698 aa15.45■□□□□ 0.06
COMMD4-209ENST00000564068 K7ELQ4 463 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-209ENST00000564068 TMEM132EQ6IEE7 984 aa15.44■□□□□ 0.06
COMMD4-209ENST00000564068 RARSP54136 660 aaKnown RBP15.44■□□□□ 0.06
COMMD4-209ENST00000564068 TBC1D32Q96NH3 1257 aa15.44■□□□□ 0.06
COMMD4-209ENST00000564068 WDR62O43379 1518 aa15.44■□□□□ 0.06
COMMD4-209ENST00000564068 C9orf84Q5VXU9 1444 aa15.44■□□□□ 0.06
COMMD4-209ENST00000564068 CLCN1P35523 988 aa15.44■□□□□ 0.06
COMMD4-209ENST00000564068 ZNF771Q7L3S4 317 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-209ENST00000564068 UQCRHLA0A096LP55 91 aa15.44■□□□□ 0.06
COMMD4-209ENST00000564068 DIAPH1O60610 1272 aaKnown RBP15.44■□□□□ 0.06
COMMD4-209ENST00000564068 UQCRHP07919 91 aa15.44■□□□□ 0.06
COMMD4-209ENST00000564068 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
COMMD4-209ENST00000564068 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
COMMD4-209ENST00000564068 TNPO1Q92973 898 aaKnown RBP15.43■□□□□ 0.06
COMMD4-209ENST00000564068 DHX29Q7Z478 1369 aaKnown RBP15.43■□□□□ 0.06
COMMD4-209ENST00000564068 CCDC39Q9UFE4 941 aa15.43■□□□□ 0.06
COMMD4-209ENST00000564068 HMOX1P09601 288 aa15.43■□□□□ 0.06
COMMD4-209ENST00000564068 LRPPRCP42704 1394 aaKnown RBP15.42■□□□□ 0.06
COMMD4-209ENST00000564068 ATF7IPQ6VMQ6 1270 aa15.42■□□□□ 0.06
COMMD4-209ENST00000564068 STK31Q9BXU1 1019 aa15.42■□□□□ 0.06
COMMD4-209ENST00000564068 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
COMMD4-209ENST00000564068 ABCC5O15440 1437 aa15.41■□□□□ 0.06
COMMD4-209ENST00000564068 NEK4P51957 841 aa15.41■□□□□ 0.06
COMMD4-209ENST00000564068 ROCK1Q13464 1354 aa15.41■□□□□ 0.06
COMMD4-209ENST00000564068 XPCQ01831 940 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-209ENST00000564068 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
COMMD4-209ENST00000564068 CIZ1Q9ULV3 898 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-209ENST00000564068 PCDHB15Q9Y5E8 787 aa15.41■□□□□ 0.06
COMMD4-209ENST00000564068 MINK1Q8N4C8 1332 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-209ENST00000564068 EVC2Q86UK5 1308 aa15.4■□□□□ 0.06
COMMD4-209ENST00000564068 CHD1LQ86WJ1 897 aa15.4■□□□□ 0.06
COMMD4-209ENST00000564068 MTERF4Q7Z6M4 381 aaKnown RBP15.39■□□□□ 0.05
COMMD4-209ENST00000564068 API5Q9BZZ5 524 aaKnown RBP15.39■□□□□ 0.05
COMMD4-209ENST00000564068 SSFA2P28290 1259 aa15.39■□□□□ 0.05
COMMD4-209ENST00000564068 WDR63Q8IWG1 891 aa15.39■□□□□ 0.05
COMMD4-209ENST00000564068 PRDM10Q9NQV6 1147 aa15.39■□□□□ 0.05
COMMD4-209ENST00000564068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-209ENST00000564068 RABEP1Q15276 862 aa15.38■□□□□ 0.05
COMMD4-209ENST00000564068 LMOD3Q0VAK6 560 aa15.38■□□□□ 0.05
COMMD4-209ENST00000564068 TMEM57Q8N5G2 664 aa15.38■□□□□ 0.05
COMMD4-209ENST00000564068 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
COMMD4-209ENST00000564068 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
COMMD4-209ENST00000564068 PDCL3Q9H2J4 239 aa15.38■□□□□ 0.05
COMMD4-209ENST00000564068 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
COMMD4-209ENST00000564068 TNNT3P45378 269 aaPredicted RBP15.38■□□□□ 0.05
COMMD4-209ENST00000564068 NKTRP30414 1462 aaKnown RBP15.37■□□□□ 0.05
COMMD4-209ENST00000564068 NUTM2FA1L443 756 aa15.37■□□□□ 0.05
COMMD4-209ENST00000564068 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
COMMD4-209ENST00000564068 NINLQ9Y2I6 1382 aa15.36■□□□□ 0.05
COMMD4-209ENST00000564068 PODXL2Q9NZ53 605 aa15.36■□□□□ 0.05
COMMD4-209ENST00000564068 TNNQ9UQP3 1299 aa15.36■□□□□ 0.05
COMMD4-209ENST00000564068 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
COMMD4-209ENST00000564068 DISP3Q9P2K9 1392 aa15.35■□□□□ 0.05
COMMD4-209ENST00000564068 SYCE3A1L190 88 aa15.35■□□□□ 0.05
COMMD4-209ENST00000564068 MBD3O95983 291 aa15.35■□□□□ 0.05
COMMD4-209ENST00000564068 VPS37CA5D8V6 355 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-209ENST00000564068 HDGFP51858 240 aaKnown RBP15.35■□□□□ 0.05
COMMD4-209ENST00000564068 SSH1Q8WYL5 1049 aa15.35■□□□□ 0.05
COMMD4-209ENST00000564068 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
COMMD4-209ENST00000564068 TSPY26PQ9H489 355 aa15.35■□□□□ 0.05
COMMD4-209ENST00000564068 GCC1Q96CN9 775 aa15.34■□□□□ 0.05
COMMD4-209ENST00000564068 IFT57Q9NWB7 429 aa15.34■□□□□ 0.05
COMMD4-209ENST00000564068 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-209ENST00000564068 CCDC27Q2M243 656 aa15.33■□□□□ 0.05
COMMD4-209ENST00000564068 PLEKHH1Q9ULM0 1364 aa15.33■□□□□ 0.04
COMMD4-209ENST00000564068 GNAI1P63096 354 aa15.32■□□□□ 0.04
COMMD4-209ENST00000564068 SPC24Q8NBT2 197 aa15.32■□□□□ 0.04
COMMD4-209ENST00000564068 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
COMMD4-209ENST00000564068 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
COMMD4-209ENST00000564068 CD109Q6YHK3 1445 aa15.32■□□□□ 0.04
COMMD4-209ENST00000564068 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
COMMD4-209ENST00000564068 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
COMMD4-209ENST00000564068 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
COMMD4-209ENST00000564068 PARD3Q8TEW0 1356 aa15.32■□□□□ 0.04
COMMD4-209ENST00000564068 BECN2A8MW95 431 aa15.31■□□□□ 0.04
COMMD4-209ENST00000564068 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
COMMD4-209ENST00000564068 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-209ENST00000564068 PER1O15534 1290 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-209ENST00000564068 HTATSF1O43719 755 aaKnown RBP15.31■□□□□ 0.04
COMMD4-209ENST00000564068 HMGN5P82970 282 aaKnown RBP15.31■□□□□ 0.04
COMMD4-209ENST00000564068 SMC3Q9UQE7 1217 aa15.31■□□□□ 0.04
COMMD4-209ENST00000564068 FIBPO43427 364 aa15.31■□□□□ 0.04
COMMD4-209ENST00000564068 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
COMMD4-209ENST00000564068 STAC3Q96MF2 364 aa15.31■□□□□ 0.04
COMMD4-209ENST00000564068 SCAPERQ9BY12 1400 aa15.3■□□□□ 0.04
COMMD4-209ENST00000564068 RLBP1P12271 317 aa15.3■□□□□ 0.04
COMMD4-209ENST00000564068 TRIM27P14373 513 aa15.3■□□□□ 0.04
COMMD4-209ENST00000564068 CAMSAP2Q08AD1 1489 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms